Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.9e-281 971.8 487 100.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.4e-215 753.1 494 81.0
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 2.1e-211 739.2 494 80.8
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 6.2e-208 727.6 494 78.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.1e-202 708.0 496 73.2
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.9e-193 679.5 488 68.9
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.4e-191 673.3 488 69.7
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 3.1e-191 672.2 494 69.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 6.9e-191 671.0 499 69.1
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.2e-190 670.2 493 70.2
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.5e-158 563.5 480 62.7
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.4e-158 562.4 476 58.6
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 1.0e-157 560.8 481 60.7
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 5.5e-156 555.1 477 58.7
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 2.1e-155 553.1 484 58.3
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.0e-154 550.8 450 60.9
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.0e-154 550.8 482 61.0
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.4e-154 550.4 475 59.6
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 5.1e-154 548.5 381 68.5
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.5e-153 547.0 483 56.3
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 4.4e-153 545.4 476 59.7
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.1e-151 540.8 442 60.4
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.1e-151 539.3 478 57.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 3.1e-151 539.3 470 58.1
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 4.1e-151 538.9 500 55.6
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 9.1e-151 537.7 499 56.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 4.5e-150 535.4 468 57.9
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.4e-148 530.4 371 66.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.5e-148 529.6 489 55.0
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 3.2e-148 529.3 477 56.6
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 7.2e-148 528.1 482 56.2
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.7e-147 526.2 491 55.6
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.7e-147 526.2 372 66.4
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.6e-147 525.8 372 66.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-146 524.2 436 62.4
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-146 524.2 436 62.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.0e-146 524.2 482 56.2
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 2.3e-146 523.1 369 64.0
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.0e-146 522.7 481 57.6
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.7e-146 521.5 436 59.4
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 4.4e-145 518.8 433 58.7
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 5.7e-145 518.5 455 58.7
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 9.7e-145 517.7 363 66.4
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 3.7e-144 515.8 466 54.9
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.8e-144 515.4 440 57.0
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.8e-144 515.4 433 58.4
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.5e-142 508.8 474 55.3
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 7.7e-142 508.1 371 62.8
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 1.9e-140 503.4 492 53.7
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 2.5e-140 503.1 385 62.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 7.2e-140 501.5 436 56.7
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 9.4e-140 501.1 384 61.7
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 8.0e-139 498.0 384 62.0
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.4e-138 497.3 369 61.5
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.0e-138 495.7 471 53.9
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.0e-137 493.4 371 62.5
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 2.0e-137 493.4 381 60.9
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.4e-137 492.3 373 61.9
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 5.7e-137 491.9 378 61.9
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-135 487.6 373 63.8
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.1e-135 486.1 383 59.8
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 7.0e-135 485.0 373 59.0
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 9.1e-135 484.6 449 56.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.2e-134 484.2 372 60.8
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.6e-134 483.8 480 52.1
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.6e-134 483.8 481 52.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 4.5e-134 482.3 467 54.6
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 5.9e-134 481.9 372 61.0
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.0e-133 481.1 484 53.1
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.3e-133 480.7 368 61.1
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-133 480.7 488 52.5
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-133 480.7 488 52.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 5.0e-133 478.8 374 59.6
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 5.0e-133 478.8 431 56.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 6.5e-133 478.4 388 60.8
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.5e-132 475.3 374 60.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.5e-132 475.3 374 60.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.5e-132 475.3 374 60.2
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 5.5e-132 475.3 366 62.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.5e-132 475.3 366 61.7
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 5.5e-132 475.3 418 56.7
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.1e-131 471.9 366 62.0
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-130 470.7 443 54.4
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.8e-130 470.3 467 54.0
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 4.0e-130 469.2 372 61.6
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 4.0e-130 469.2 372 61.3
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.0e-129 466.8 450 54.4
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.0e-129 466.8 371 58.5
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 9.8e-129 464.5 430 55.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 2.8e-128 463.0 468 53.0
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.1e-127 459.1 371 60.1
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-126 457.6 377 59.2
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.0e-125 454.5 361 60.7
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.8e-123 446.4 464 52.4
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 4.4e-121 439.1 354 59.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.5e-121 438.3 499 47.7
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.6e-115 420.6 369 52.3
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.4e-114 417.5 440 49.5
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.2e-97 361.3 378 47.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.2e-88 330.5 428 43.9
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 7.8e-86 322.0 328 51.5
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.6e-75 287.7 358 42.5
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 8.1e-75 285.4 207 63.3
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.0e-73 280.8 255 54.1
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 2.6e-73 280.4 295 52.5
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.1e-71 275.0 353 43.9
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 3.1e-66 256.9 469 35.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 7.6e-65 252.3 395 37.7
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.6e-54 216.5 309 39.8
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.3e-51 208.4 395 35.2
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 5.9e-33 146.4 229 40.6
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.4e-31 141.7 112 61.6
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.6e-30 138.3 131 54.2
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.0e-30 136.0 377 30.8
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.6e-28 131.0 129 52.7
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.3e-28 130.6 376 28.5
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 8.2e-27 125.9 372 29.3
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-23 114.8 400 29.2
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.2e-22 112.1 331 31.4
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.0e-20 104.8 57 77.2
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.5e-20 102.8 228 35.1
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 6.1e-06 56.6 42 64.3


User provided reference genes

Program Settings