Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.7e-103 379.4 200 100.0
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 2.0e-80 302.8 201 78.1
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 3.4e-72 275.4 205 78.0
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 1.3e-66 256.9 208 69.7
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 7.0e-65 251.1 204 67.6
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 1.2e-64 250.4 204 68.1
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 3.8e-63 245.4 196 68.4
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 3.8e-63 245.4 196 70.4
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 3.8e-63 245.4 198 69.7
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 6.5e-63 244.6 197 68.5
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 8.5e-63 244.2 188 70.7
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 2.5e-62 242.7 207 65.7
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 2.5e-62 242.7 201 71.1
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 4.2e-62 241.9 199 68.3
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 4.2e-62 241.9 199 68.3
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.2e-61 240.4 203 67.0
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 1.6e-61 240.0 198 67.2
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 2.1e-61 239.6 200 65.5
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.1e-61 239.6 202 67.8
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 6.1e-61 238.0 205 66.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 1.4e-60 236.9 203 67.5
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.8e-60 236.5 175 72.0
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.3e-60 236.1 205 64.9
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 2.3e-60 236.1 205 64.4
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 2.3e-60 236.1 203 71.4
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 3.0e-60 235.7 204 67.6
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 4.0e-60 235.3 205 64.4
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 6.7e-60 234.6 161 75.8
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.2e-59 233.8 199 67.8
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.6e-59 232.6 201 64.2
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 3.3e-59 232.3 170 73.5
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 9.7e-59 230.7 168 70.2
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 9.7e-59 230.7 197 66.5
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 9.7e-59 230.7 199 64.8
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 1.7e-58 229.9 201 66.7
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 2.2e-58 229.6 199 69.3
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 2.2e-58 229.6 171 70.8
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.2e-58 229.6 177 68.4
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 2.2e-58 229.6 169 69.8
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 2.8e-58 229.2 204 63.2
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 4.8e-58 228.4 175 71.4
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 8.2e-58 227.6 172 71.5
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.1e-57 227.3 183 68.3
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 1.1e-57 227.3 167 71.9
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.4e-57 226.9 201 63.2
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 1.8e-57 226.5 206 65.0
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.8e-57 226.5 198 64.1
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 2.4e-57 226.1 200 63.0
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 3.1e-57 225.7 205 63.4
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.0e-57 224.6 202 63.4
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.0e-57 224.6 202 63.4
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 7.0e-57 224.6 203 67.5
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 9.1e-57 224.2 203 63.5
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 9.1e-57 224.2 207 62.8
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 9.1e-57 224.2 204 62.7
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 1.6e-56 223.4 182 66.5
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 1.6e-56 223.4 170 70.6
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 2.0e-56 223.0 184 66.3
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 2.0e-56 223.0 164 75.6
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 2.0e-56 223.0 199 64.8
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 2.0e-56 223.0 199 62.8
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 2.0e-56 223.0 120 90.8
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 2.7e-56 222.6 204 62.3
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.5e-56 222.2 164 73.2
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.5e-56 222.2 164 76.2
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.5e-56 222.2 173 70.5
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 1.0e-55 220.7 173 73.4
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.0e-55 220.7 160 76.2
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.3e-55 220.3 209 59.3
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 1.7e-55 219.9 190 61.6
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 2.2e-55 219.5 174 66.7
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 2.9e-55 219.2 200 63.0
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 5.0e-55 218.4 186 64.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 6.5e-55 218.0 168 69.0
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 6.5e-55 218.0 196 65.3
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 8.5e-55 217.6 193 61.7
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 8.5e-55 217.6 205 62.9
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.1e-54 217.2 193 64.8
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 1.5e-54 216.9 198 61.6
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 1.5e-54 216.9 206 61.2
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 7.2e-54 214.5 200 63.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 7.2e-54 214.5 199 61.8
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.2e-53 213.8 168 66.7
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 1.2e-53 213.8 168 66.7
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 3.6e-53 212.2 199 59.8
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 4.7e-53 211.8 198 60.6
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 2.3e-52 209.5 130 80.0
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 2.3e-52 209.5 203 65.0
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 4.0e-52 208.8 130 80.0
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 4.0e-52 208.8 130 79.2
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 4.0e-52 208.8 130 79.2
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 4.0e-52 208.8 130 80.0
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 1.2e-48 197.2 122 82.0
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 3.5e-48 195.7 184 56.0
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 5.9e-48 194.9 115 80.0
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 7.7e-48 194.5 132 70.5
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 2.9e-47 192.6 184 54.9
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 4.7e-45 185.3 172 58.1
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 4.0e-44 182.2 169 60.4
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 4.0e-44 182.2 122 70.5
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 4.0e-44 182.2 108 78.7
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 5.2e-44 181.8 120 74.2
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 1.2e-43 180.6 113 76.1
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 3.4e-43 179.1 113 77.0
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.4e-41 173.7 130 70.8
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 6.1e-37 158.3 114 64.0
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 3.5e-32 142.5 199 47.2
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 6.2e-29 131.7 198 48.5
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 2.5e-22 109.8 113 43.4
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.2e-19 100.9 109 45.0
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 2.7e-16 89.7 105 44.8
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 5.1e-15 85.5 177 28.2
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 8.1e-13 78.2 44 81.8


User provided reference genes

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