Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 1.1e-141 506.5 250 100.0
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 4.4e-101 371.7 219 81.7
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 1.1e-99 367.1 219 80.4
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 1.4e-99 366.7 211 81.0
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 2.1e-95 352.8 219 78.1
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 1.8e-94 349.7 219 75.3
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 4.9e-92 341.7 225 72.9
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 6.4e-92 341.3 218 73.9
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 1.4e-91 340.1 218 72.9
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 4.1e-91 338.6 218 72.5
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 4.1e-91 338.6 219 71.2
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 5.4e-91 338.2 218 72.9
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.7e-90 335.9 218 70.6
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.5e-90 335.5 225 70.7
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 6.0e-90 334.7 218 71.1
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 7.8e-90 334.3 225 70.7
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 7.8e-90 334.3 225 70.7
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.3e-89 333.6 218 70.6
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.3e-89 333.6 218 71.1
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 1.3e-89 333.6 218 71.6
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 2.3e-89 332.8 218 70.2
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.0e-89 332.4 218 72.5
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 3.0e-89 332.4 223 70.4
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 8.6e-89 330.9 214 71.0
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 2.5e-88 329.3 218 68.3
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 2.5e-88 329.3 225 68.4
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 3.3e-88 328.9 218 69.7
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 9.6e-88 327.4 219 74.4
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.2e-87 327.0 225 68.9
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 2.1e-87 326.2 218 70.2
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.8e-87 325.9 218 70.6
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.8e-87 325.9 219 68.5
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 3.6e-87 325.5 218 69.7
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 3.6e-87 325.5 217 70.5
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 6.2e-87 324.7 218 69.3
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 8.1e-87 324.3 225 68.4
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 3.1e-86 322.4 218 69.7
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 5.2e-86 321.6 218 69.3
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 1.5e-85 320.1 225 67.1
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.6e-85 319.3 225 66.2
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 3.4e-85 318.9 217 68.7
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 4.4e-85 318.5 218 68.3
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 9.9e-85 317.4 218 69.3
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 9.9e-85 317.4 218 66.5
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 9.9e-85 317.4 218 66.5
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.3e-84 317.0 218 66.5
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 1.3e-84 317.0 218 67.9
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 1.7e-84 316.6 225 66.2
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 1.7e-84 316.6 225 66.2
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.7e-84 316.6 225 66.2
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 3.8e-84 315.5 216 66.2
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 4.9e-84 315.1 211 70.1
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 1.4e-83 313.5 218 67.4
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 1.9e-83 313.2 218 67.4
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 4.2e-83 312.0 226 62.8
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 7.1e-83 311.2 217 68.2
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 7.1e-83 311.2 219 67.1
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 9.3e-83 310.8 225 65.8
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 1.6e-82 310.1 217 67.3
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 2.1e-82 309.7 217 67.3
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 6.0e-82 308.1 219 64.4
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 7.8e-82 307.8 218 66.5
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 1.0e-81 307.4 217 66.4
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 2.3e-81 306.2 218 65.6
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 3.9e-81 305.4 225 63.6
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.1e-80 303.9 224 65.6
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 1.5e-80 303.5 218 65.1
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 3.3e-80 302.4 216 66.7
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 3.3e-80 302.4 240 61.7
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 4.3e-80 302.0 214 65.4
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 9.6e-80 300.8 216 65.3
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 1.6e-79 300.1 216 65.3
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 2.1e-79 299.7 188 74.5
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 2.8e-79 299.3 214 66.4
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 4.8e-79 298.5 225 63.1
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 6.2e-79 298.1 209 66.0
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 6.2e-79 298.1 201 69.2
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 1.4e-78 297.0 218 63.8
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 2.4e-78 296.2 216 65.7
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 2.4e-78 296.2 216 65.7
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 1.2e-77 293.9 216 65.3
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 1.2e-77 293.9 215 65.6
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 2.0e-77 293.1 223 63.2
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 2.0e-77 293.1 222 62.6
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 2.6e-77 292.7 210 66.2
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 5.8e-77 291.6 219 63.5
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 8.7e-73 277.7 186 68.8
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 3.3e-72 275.8 188 67.6
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 4.3e-72 275.4 216 61.6
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 9.0e-70 267.7 176 71.0
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 4.9e-68 261.9 218 57.8
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 8.4e-68 261.2 189 66.1
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.7e-66 256.1 218 58.7
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 2.7e-66 256.1 216 57.4
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 5.1e-65 251.9 265 52.5
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 8.7e-65 251.1 214 57.0
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 1.9e-64 250.0 218 56.9
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 4.3e-64 248.8 210 55.2
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 8.1e-63 244.6 218 56.4
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 2.1e-58 229.9 217 53.5
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 5.7e-56 221.9 220 53.2
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 6.9e-54 214.9 216 53.2
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 4.8e-47 192.2 175 53.1
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 1.4e-41 174.1 174 51.1
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 4.2e-35 152.5 168 47.6
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 9.4e-35 151.4 193 42.0
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 2.3e-33 146.7 146 48.6
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 1.3e-23 114.4 94 59.6
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 5.0e-20 102.4 77 63.6
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 8.5e-20 101.7 106 46.2
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 6.8e-17 92.0 169 33.7
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 7.7e-13 78.6 47 72.3
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 2.6e-08 63.5 189 29.1
CBR_g10841 Chara braunii HOM05D001779 ORTHO05D001753 4.4e-08 62.8 100 31.0
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 4.4e-08 62.8 198 30.3
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 7.5e-08 62.0 186 28.5
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 9.8e-08 61.6 187 28.9
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 9.8e-08 61.6 183 29.0
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 2.2e-07 60.5 188 28.2
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 4.9e-07 59.3 186 28.0
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.4e-06 57.8 158 29.1
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 3.1e-06 56.6 150 28.7
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 3.1e-06 56.6 185 25.9
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 4.1e-06 56.2 191 28.3
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 9.2e-06 55.1 191 27.7


User provided reference genes

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