Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 4.0e-148 528.1 272 100.0
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 5.0e-90 335.1 256 72.7
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 5.0e-90 335.1 256 71.5
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 2.2e-74 283.1 267 62.5
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 6.6e-66 255.0 257 58.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 5.6e-57 225.3 252 54.4
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 1.9e-52 210.3 252 50.0
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 9.2e-52 208.0 253 49.8
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.3e-50 204.1 251 48.2
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 2.3e-50 203.4 252 48.8
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 2.3e-50 203.4 259 49.4
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 3.4e-46 189.5 142 67.6
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 3.5e-35 152.9 268 38.8
Medtr6g040180 Medicago truncatula HOM05D007372 ORTHO05D009318 1.9e-33 147.1 136 64.7
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 4.3e-33 146.0 268 38.4
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 3.1e-31 139.8 251 36.3
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 2.6e-30 136.7 328 34.1
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 6.4e-29 132.1 250 36.0
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 8.4e-29 131.7 266 35.3
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 8.4e-29 131.7 108 63.9
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.9e-28 130.6 259 35.9
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.9e-28 130.6 280 37.1
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.9e-28 130.6 305 35.1
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 3.2e-28 129.8 267 36.3
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 5.4e-28 129.0 280 36.8
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 9.3e-28 128.3 260 34.2
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.2e-27 127.9 271 33.9
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.7e-27 126.7 272 36.8
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 4.6e-27 125.9 259 34.7
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 6.0e-27 125.6 102 65.7
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 6.0e-27 125.6 256 35.9
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 7.8e-27 125.2 292 32.9
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.0e-26 124.8 272 32.0
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.3e-26 124.4 276 35.5
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.7e-26 124.0 255 38.8
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.3e-26 123.6 256 35.9
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 3.9e-26 122.9 274 32.8
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 8.7e-26 121.7 253 36.4
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.9e-25 120.6 260 33.1
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 3.3e-25 119.8 273 38.5
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 4.3e-25 119.4 265 36.2
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 4.3e-25 119.4 335 31.6
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 5.6e-25 119.0 273 33.0
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 5.6e-25 119.0 294 33.7
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 7.3e-25 118.6 258 33.7
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 7.3e-25 118.6 259 35.5
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 7.3e-25 118.6 250 34.0
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 4.8e-24 115.9 260 33.5
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 1.1e-23 114.8 299 33.4
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.8e-23 114.0 266 32.7
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.4e-23 113.6 250 34.8
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 3.1e-23 113.2 228 36.0
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 4.0e-23 112.8 280 34.3
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 5.3e-23 112.5 292 31.2
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.5e-22 110.9 252 35.7
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.5e-22 110.9 250 34.0
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.4e-22 109.8 289 29.4
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 3.4e-22 109.8 327 31.2
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 7.6e-22 108.6 200 38.0
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.3e-21 107.8 253 33.2
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 1.3e-21 107.8 217 37.8
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.7e-21 107.5 266 32.7
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.2e-21 107.1 290 32.4
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.2e-21 107.1 192 40.6
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 3.8e-21 106.3 195 39.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 4.9e-21 105.9 145 46.2
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 7.1e-20 102.1 127 50.4
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 9.3e-20 101.7 133 44.4
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 9.3e-20 101.7 276 33.3
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.6e-19 100.9 132 46.2
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 1.6e-19 100.9 282 28.7
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 2.7e-19 100.1 251 31.9
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 7.9e-19 98.6 296 28.0
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 2.3e-18 97.1 292 31.8
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.3e-18 97.1 134 44.0
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 6.7e-18 95.5 304 28.3
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.9e-17 94.0 95 55.8
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 2.8e-16 90.1 142 38.7
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.6e-16 89.7 248 31.9
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.4e-15 87.8 212 34.9
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 3.4e-14 83.2 306 26.1
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 5.8e-14 82.4 95 47.4
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 2.9e-13 80.1 301 25.6
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 3.8e-13 79.7 206 35.4
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 3.8e-13 79.7 312 27.9
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.1e-12 78.2 149 35.6
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 7.9e-11 72.0 275 28.0
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.8e-10 70.9 211 31.8
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.3e-10 70.5 107 42.1
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 8.7e-10 68.6 109 40.4
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.5e-09 67.0 80 46.2
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 3.3e-09 66.6 166 31.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 4.3e-09 66.2 198 28.3
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 5.6e-09 65.9 125 35.2
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.8e-08 63.5 145 31.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.7e-08 63.2 80 45.0
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.1e-07 60.1 275 25.1
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 4.0e-07 59.7 196 29.6
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 9.0e-07 58.5 115 34.8
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.0e-05 55.1 180 26.7


User provided reference genes

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