Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04617_v3 Cicer arietinum L. HOM05D000068 ORTHO05D019586 3.0e-69 265.0 128 100.0
Ca_26682_v3 Cicer arietinum L. HOM05D000068 ORTHO05D019586 1.9e-68 262.3 126 100.0
Ca_23179_v3 Cicer arietinum L. HOM05D000068 ORTHO05D019586 7.3e-68 260.4 126 99.2
Ca_28427_v3 Cicer arietinum L. HOM05D000068 ORTHO05D019586 8.1e-67 256.9 126 98.4
TPR.G1108 Trifolium pratense HOM05D000068 ORTHO05D004691 8.0e-22 107.5 123 50.4
Medtr7g033710 Medicago truncatula HOM05D000068 ORTHO05D004691 1.3e-19 100.1 130 49.2
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 1.7e-19 99.8 120 46.7
Phvul.008G153713 Phaseolus vulgaris HOM05D000068 ORTHO05D004691 1.1e-18 97.1 127 48.0
Lj1g0012222 Lotus japonicus HOM05D000068 ORTHO05D004691 5.3e-18 94.7 125 45.6
Glyma.16G071000 Glycine max HOM05D000068 ORTHO05D004691 5.9e-17 91.3 96 53.1
Lalb_Chr14g0362781 Lupinus albus HOM05D000068 ORTHO05D004691 8.8e-13 77.4 99 43.4
Haze_14740 Corylus avellana HOM05D000068 ORTHO05D004691 5.7e-12 74.7 134 41.0
Cfa007368 Carpinus fangiana HOM05D000068 ORTHO05D004691 4.8e-11 71.6 133 39.1
Dinv24787 Davidia involucrata HOM05D000068 ORTHO05D004691 4.1e-10 68.6 63 44.4
CiPaw.04G028600 Carya illinoinensis HOM05D000068 ORTHO05D004691 7.0e-10 67.8 120 40.0
CSS0014318 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004691 2.7e-09 65.9 111 33.3
Aqoxy5G03775 Aquilegia oxysepala HOM05D000068 ORTHO05D004691 3.5e-09 65.5 64 45.3
RcHm_v2.0_Chr4g0432941 Rosa chinensis HOM05D000068 ORTHO05D004691 3.5e-09 65.5 154 29.9
Dinv33441 Davidia involucrata HOM05D000068 ORTHO05D004691 1.7e-08 63.2 137 33.6
Oeu029878.3 Olea europaea HOM05D000068 ORTHO05D004691 1.7e-08 63.2 61 44.3
TWI56G0708 Tripterygium wilfordii HOM05D000068 ORTHO05D004691 1.7e-08 63.2 94 40.4
Hma1.2p1_0999F.1_g246200 Hydrangea macrophylla HOM05D000068 ORTHO05D004691 2.9e-08 62.4 156 31.4
FAN17G2533 Fragaria x ananassa HOM05D000068 ORTHO05D004691 3.8e-08 62.0 138 30.4
FAN22G1590 Fragaria x ananassa HOM05D000068 ORTHO05D004691 3.8e-08 62.0 138 30.4
Nn3g16722 Nelumbo nucifera HOM05D000068 ORTHO05D004691 3.8e-08 62.0 58 46.6
BcaC08g45812 Brassica carinata HOM05D000068 ORTHO05D004691 5.0e-08 61.6 63 42.9
C06p36050 Brassica napus HOM05D000068 ORTHO05D004691 5.0e-08 61.6 63 42.9
BolC6t38726H Brassica oleracea HOM05D000068 ORTHO05D004691 5.0e-08 61.6 63 42.9
CSS0005686 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004691 5.0e-08 61.6 125 34.4
CSS0011390 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D004691 5.0e-08 61.6 125 34.4
Thhalv10018207m.g Eutrema salsugineum HOM05D000068 ORTHO05D004691 5.0e-08 61.6 65 38.5
Lsat_1_v5_gn_8_152201 Lactuca sativa HOM05D000068 ORTHO05D004691 5.0e-08 61.6 69 43.5
EL10Ac6g13805 Beta vulgaris HOM05D000068 ORTHO05D004691 6.5e-08 61.2 64 42.2
BraA07t30738Z Brassica rapa HOM05D000068 ORTHO05D004691 8.5e-08 60.8 63 42.9
TAR371G0517 Trochodendron aralioides HOM05D000068 ORTHO05D004691 8.5e-08 60.8 63 42.9
BcaB03g15549 Brassica carinata HOM05D000068 ORTHO05D004691 1.1e-07 60.5 63 41.3
Migut.K00596 Erythranthe guttata HOM05D000068 ORTHO05D004691 1.1e-07 60.5 64 43.8
GSVIVG01032404001 Vitis vinifera HOM05D000068 ORTHO05D004691 1.1e-07 60.5 103 38.8
FvH4_4g25540 Fragaria vesca HOM05D000068 ORTHO05D004691 1.5e-07 60.1 138 29.7
Glyma.02G038800 Glycine max HOM05D000068 ORTHO05D004691 1.5e-07 60.1 68 39.7
vmacro16197 Vaccinium macrocarpon HOM05D000068 ORTHO05D004691 1.5e-07 60.1 91 33.0
ClCG05G025720 Citrullus lanatus HOM05D000068 ORTHO05D004691 1.9e-07 59.7 67 43.3
MELO3C011954.2 Cucumis melo HOM05D000068 ORTHO05D004691 1.9e-07 59.7 67 43.3
Lju41C42T6 Lonicera japonica HOM05D000068 ORTHO05D004691 1.9e-07 59.7 121 33.9
Sed0001750 Sechium edule HOM05D000068 ORTHO05D004691 1.9e-07 59.7 65 44.6
A07p31030 Brassica napus HOM05D000068 ORTHO05D004691 2.5e-07 59.3 113 34.5
Lj3A1058G56 Lonicera japonica HOM05D000068 ORTHO05D004691 2.5e-07 59.3 120 30.8
Aa31LG10G1600 Aethionema arabicum HOM05D000068 ORTHO05D004691 3.2e-07 58.9 63 38.1
FAN07G2172 Fragaria x ananassa HOM05D000068 ORTHO05D004691 3.2e-07 58.9 138 29.7
Carub.0002s1734 Capsella rubella HOM05D000068 ORTHO05D004691 4.2e-07 58.5 63 39.7
Cpa.g.sc33.17 Carica papaya HOM05D000068 ORTHO05D004691 4.2e-07 58.5 63 42.9
CsaV3_5G031160 Cucumis sativus L. HOM05D000068 ORTHO05D004691 4.2e-07 58.5 67 41.8
QL02p074475 Quercus lobata HOM05D000068 ORTHO05D004691 5.5e-07 58.2 68 47.1
Glyma.01G026000 Glycine max HOM05D000068 ORTHO05D004691 7.2e-07 57.8 63 41.3
PSO067G0084 Papaver somniferum HOM05D000068 ORTHO05D004691 7.2e-07 57.8 62 41.9
Ah.03g133030 Amaranthus hybridus HOM05D000068 ORTHO05D004691 9.4e-07 57.4 90 34.4
Cc11_g15710 Coffea canephora HOM05D000068 ORTHO05D004691 9.4e-07 57.4 60 38.3
Sabra10G0022600 Salix brachista HOM05D000068 ORTHO05D004691 9.4e-07 57.4 63 39.7
Hund12979 Selenicereus undatus HOM05D000068 ORTHO05D004691 9.4e-07 57.4 56 44.6
ATR0686G084 Amborella trichopoda HOM05D000068 ORTHO05D019586 1.2e-06 57.0 52 44.2
Haze_12246 Corylus avellana HOM05D000068 ORTHO05D004691 1.2e-06 57.0 63 39.7
RcHm_v2.0_Chr2g0173091 Rosa chinensis HOM05D000068 ORTHO05D004691 1.2e-06 57.0 66 39.4
VMungo1215G2343 Vigna mungo HOM05D000068 ORTHO05D004691 1.2e-06 57.0 67 38.8
AT1G70610 Arabidopsis thaliana HOM05D000068 ORTHO05D004691 1.6e-06 56.6 58 39.7
Potri.010G045900 Populus trichocarpa HOM05D000068 ORTHO05D004691 1.6e-06 56.6 63 38.1
THA.LOC104822986 Tarenaya hassleriana HOM05D000068 ORTHO05D004691 1.6e-06 56.6 58 41.4
unitig_8.g2932 Utricularia gibba HOM05D000068 ORTHO05D004691 1.6e-06 56.6 66 36.4
vmacro05866 Vaccinium macrocarpon HOM05D000068 ORTHO05D004691 1.6e-06 56.6 61 39.3
CARHR063840 Cardamine hirsuta HOM05D000068 ORTHO05D004691 2.1e-06 56.2 58 39.7
Eucgr.I01741 Eucalyptus grandis HOM05D000068 ORTHO05D019586 2.1e-06 56.2 57 45.6
Lj2g0025614 Lotus japonicus HOM05D000068 ORTHO05D004691 2.1e-06 56.2 75 34.7
SalBow2G2711 Salvia bowleyana HOM05D000068 ORTHO05D004691 2.1e-06 56.2 64 37.5
TWI18G1162 Tripterygium wilfordii HOM05D000068 ORTHO05D004691 2.1e-06 56.2 140 30.0
AL2G30040 Arabidopsis lyrata HOM05D000068 ORTHO05D004691 2.7e-06 55.8 58 37.9
DCAR_011254 Daucus carota HOM05D000068 ORTHO05D004691 2.7e-06 55.8 147 31.3
Rhsim12G0110500 Rhododendron simsii HOM05D000068 ORTHO05D004691 2.7e-06 55.8 133 29.3
PGSC0003DMG400029157 Solanum tuberosum HOM05D000068 ORTHO05D004691 2.7e-06 55.8 80 32.5
PSO111G0048 Papaver somniferum HOM05D000068 ORTHO05D004691 3.6e-06 55.5 62 40.3
Prupe.1G244000 Prunus persica HOM05D000068 ORTHO05D004691 3.6e-06 55.5 63 36.5
Manes.13G024700 Manihot esculenta HOM05D000068 ORTHO05D004691 4.7e-06 55.1 63 41.3
Phvul.002G150000 Phaseolus vulgaris HOM05D000068 ORTHO05D004691 4.7e-06 55.1 68 36.8
Psat2g086760 Pisum sativum HOM05D000068 ORTHO05D004691 4.7e-06 55.1 76 34.2
QL03p058122 Quercus lobata HOM05D000068 ORTHO05D004691 4.7e-06 55.1 63 36.5
ECA233G1375 Erigeron canadensis HOM05D000068 ORTHO05D004691 6.1e-06 54.7 68 35.3
Eucgr.H02501 Eucalyptus grandis HOM05D000068 ORTHO05D004691 6.1e-06 54.7 53 49.1
Medtr5g033080 Medicago truncatula HOM05D000068 ORTHO05D004691 6.1e-06 54.7 63 39.7
Rhsim10G0016900 Rhododendron simsii HOM05D000068 ORTHO05D004691 6.1e-06 54.7 57 42.1
Solyc12g070270.2 Solanum lycopersicum HOM05D000068 ORTHO05D004691 6.1e-06 54.7 60 36.7
Sopen12g027430 Solanum pennellii HOM05D000068 ORTHO05D004691 6.1e-06 54.7 60 36.7
MSTRG.7927 Avicennia marina HOM05D000068 ORTHO05D004691 8.0e-06 54.3 64 34.4
AUR62005460 Chenopodium quinoa HOM05D000068 ORTHO05D004691 8.0e-06 54.3 64 39.1
AUR62024281 Chenopodium quinoa HOM05D000068 ORTHO05D004691 8.0e-06 54.3 64 39.1
Ciclev10014634m.g Citrus clementina HOM05D000068 ORTHO05D004691 8.0e-06 54.3 57 38.6
Gohir.D09G028900 Gossypium hirsutum HOM05D000068 ORTHO05D004691 8.0e-06 54.3 61 39.3


User provided reference genes

Program Settings