Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04572_v3 Cicer arietinum L. HOM05D002002 ORTHO05D003658 5.1e-34 147.1 72 100.0
TPR.G38725 Trifolium pratense HOM05D002002 ORTHO05D003658 6.7e-26 120.2 70 85.7
Medtr5g033070 Medicago truncatula HOM05D002002 ORTHO05D003658 5.7e-25 117.1 72 81.9
Glyma.02G038900 Glycine max HOM05D002002 ORTHO05D003658 2.5e-17 91.7 72 66.7
Phvul.003G065000 Phaseolus vulgaris HOM05D002002 ORTHO05D003658 3.3e-17 91.3 72 65.3
Lj2g0007304 Lotus japonicus HOM05D002002 ORTHO05D003658 9.7e-17 89.7 72 65.3
Glyma.08G282202 Glycine max HOM05D002002 ORTHO05D003658 1.6e-16 89.0 73 64.4
VMungo0251G0889 Vigna mungo HOM05D002002 ORTHO05D003658 1.2e-14 82.8 72 58.3
Phvul.002G149900 Phaseolus vulgaris HOM05D002002 ORTHO05D003658 6.5e-13 77.0 64 62.5
Manes.12G023250 Manihot esculenta HOM05D002002 ORTHO05D003658 8.5e-13 76.6 68 60.3
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 2.5e-12 75.1 68 54.4
Lj4g0014379 Lotus japonicus HOM05D002002 ORTHO05D003658 2.5e-12 75.1 63 60.3
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 3.2e-12 74.7 73 60.3
Glyma.01G025900 Glycine max HOM05D002002 ORTHO05D003658 3.2e-12 74.7 52 67.3
Prupe.1G244300 Prunus persica HOM05D002002 ORTHO05D003658 1.6e-11 72.4 67 53.7
Manes.13G024400 Manihot esculenta HOM05D002002 ORTHO05D003658 7.9e-11 70.1 68 50.0
MD13G1101500 Malus domestica HOM05D002002 ORTHO05D003658 1.0e-10 69.7 67 50.7
FAN05G0600 Fragaria x ananassa HOM05D002002 ORTHO05D003658 3.9e-10 67.8 67 55.2
FAN05G4965 Fragaria x ananassa HOM05D002002 ORTHO05D003658 3.9e-10 67.8 67 55.2
RcHm_v2.0_Chr4g0432961 Rosa chinensis HOM05D002002 ORTHO05D008711 6.7e-10 67.0 65 53.8
FAN02G4604 Fragaria x ananassa HOM05D002002 ORTHO05D003658 8.8e-10 66.6 66 54.5
Cpa.g.sc33.19 Carica papaya HOM05D002002 ORTHO05D008711 1.1e-09 66.2 65 50.8
FAN14G2025 Fragaria x ananassa HOM05D002002 ORTHO05D003658 1.5e-09 65.9 66 54.5
Potri.010G046225 Populus trichocarpa HOM05D002002 ORTHO05D003658 2.0e-09 65.5 62 53.2
Thecc.02G259800 Theobroma cacao HOM05D002002 ORTHO05D003658 2.5e-09 65.1 72 51.4
CANSAT01G1710 Cannabis sativa HOM05D002002 ORTHO05D003658 5.7e-09 63.9 67 52.2
Potri.008G186700 Populus trichocarpa HOM05D002002 ORTHO05D003658 5.7e-09 63.9 62 53.2
Eucgr.B03286 Eucalyptus grandis HOM05D002002 ORTHO05D003658 2.2e-08 62.0 67 46.3
Atru.chr11.2098 Acer truncatum HOM05D002002 ORTHO05D003658 2.8e-08 61.6 63 50.8
Gohir.D02G158850 Gossypium hirsutum HOM05D002002 ORTHO05D003658 4.8e-08 60.8 72 44.4
TWI36G0682 Tripterygium wilfordii HOM05D002002 ORTHO05D003658 4.8e-08 60.8 67 47.8
TPR.G17746 Trifolium pratense HOM05D002002 ORTHO05D003658 1.4e-07 59.3 63 46.0
Aqoxy5G03765 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 1.8e-07 58.9 70 44.3
COL.COLO4_24276 Corchorus olitorius HOM05D002002 ORTHO05D008711 1.8e-07 58.9 72 47.2
PGR102G0007 Punica granatum HOM05D002002 ORTHO05D003658 1.8e-07 58.9 73 46.6
Ciclev10033784m.g Citrus clementina HOM05D002002 ORTHO05D003658 4.1e-07 57.8 67 52.2
Oeu056712.1 Olea europaea HOM05D002002 ORTHO05D013431 4.1e-07 57.8 62 43.5
FvH4_6g24840 Fragaria vesca HOM05D002002 ORTHO05D003658 5.3e-07 57.4 59 54.2
Hma1.2p1_0160F.1_g071270 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 9.1e-07 56.6 67 47.8
Actinidia15095 Actinidia chinensis HOM05D002002 ORTHO05D003658 1.5e-06 55.8 57 43.9
Cc11_g15730 Coffea canephora HOM05D002002 ORTHO05D008711 7.7e-06 53.5 67 44.8


User provided reference genes

Program Settings