Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04500_v3 Cicer arietinum L. HOM05D007626 ORTHO05D009633 2.7e-112 408.7 209 100.0
Medtr6g032995 Medicago truncatula HOM05D007626 ORTHO05D009633 1.5e-78 296.6 212 76.9
TPR.G6093 Trifolium pratense HOM05D007626 ORTHO05D009633 5.7e-78 294.7 213 75.6
Psat1g091200 Pisum sativum HOM05D007626 ORTHO05D009633 4.9e-77 291.6 214 73.4
VMungo0464G1403 Vigna mungo HOM05D007626 ORTHO05D009633 2.6e-70 269.2 214 70.1
Glyma.02G070800 Glycine max HOM05D007626 ORTHO05D009633 3.7e-69 265.4 213 70.4
Phvul.004G076800 Phaseolus vulgaris HOM05D007626 ORTHO05D009633 1.2e-67 260.4 213 66.7
Lalb_Chr06g0173891 Lupinus albus HOM05D007626 ORTHO05D009633 3.5e-67 258.8 214 71.0
Lj2g0026043 Lotus japonicus HOM05D007626 ORTHO05D009633 1.7e-66 256.5 215 70.2
Manes.09G143600 Manihot esculenta HOM05D007626 ORTHO05D009633 7.0e-60 234.6 222 59.0
Ciclev10020243m.g Citrus clementina HOM05D007626 ORTHO05D009633 1.6e-59 233.4 222 60.4
TWI60G0184 Tripterygium wilfordii HOM05D007626 ORTHO05D009633 6.0e-59 231.5 218 60.1
Cpa.g.sc59.30 Carica papaya HOM05D007626 ORTHO05D009633 1.7e-58 229.9 212 59.0
CiPaw.09G000400 Carya illinoinensis HOM05D007626 ORTHO05D009633 3.9e-58 228.8 222 56.8
Potri.019G031800 Populus trichocarpa HOM05D007626 ORTHO05D009633 3.9e-58 228.8 223 59.2
Cfa016427 Carpinus fangiana HOM05D007626 ORTHO05D009633 5.6e-57 224.9 213 58.2
Sabra19G0040500 Salix brachista HOM05D007626 ORTHO05D009633 1.2e-56 223.8 223 58.3
Eucgr.K01473 Eucalyptus grandis HOM05D007626 ORTHO05D009633 1.6e-56 223.4 222 58.1
Peaxi162Scf00003g00489 Petunia axillaris HOM05D007626 ORTHO05D009633 2.1e-56 223.0 211 59.2
QL07p020642 Quercus lobata HOM05D007626 ORTHO05D009633 2.1e-56 223.0 218 58.7
Thecc.05G258800 Theobroma cacao HOM05D007626 ORTHO05D009633 8.1e-56 221.1 222 58.6
TAR369G1032 Trochodendron aralioides HOM05D007626 ORTHO05D009633 1.1e-55 220.7 220 56.4
Duzib106G0740 Durio zibethinus HOM05D007626 ORTHO05D009633 1.4e-55 220.3 222 57.7
COL.COLO4_08628 Corchorus olitorius HOM05D007626 ORTHO05D009633 2.3e-55 219.5 222 57.7
PGR142G2321 Punica granatum HOM05D007626 ORTHO05D009633 2.6e-54 216.1 213 58.7
Solyc10g078470.2 Solanum lycopersicum HOM05D007626 ORTHO05D009633 2.6e-54 216.1 212 56.6
Sopen10g029130 Solanum pennellii HOM05D007626 ORTHO05D009633 5.8e-54 214.9 212 56.6
Prupe.7G001500 Prunus persica HOM05D007626 ORTHO05D009633 7.5e-54 214.5 216 58.3
THA.LOC104801058 Tarenaya hassleriana HOM05D007626 ORTHO05D009633 1.7e-53 213.4 209 58.4
CARHR127270 Cardamine hirsuta HOM05D007626 ORTHO05D009633 2.2e-53 213.0 210 56.7
Thhalv10017973m.g Eutrema salsugineum HOM05D007626 ORTHO05D009633 2.9e-53 212.6 210 56.7
Gohir.A11G240300 Gossypium hirsutum HOM05D007626 ORTHO05D009633 3.7e-53 212.2 216 56.0
PGSC0003DMG400008360 Solanum tuberosum HOM05D007626 ORTHO05D009633 3.7e-53 212.2 217 54.8
Nitab4.5_0000812g0110 Nicotiana tabacum HOM05D007626 ORTHO05D009633 1.4e-52 210.3 211 56.4
AL4G28900 Arabidopsis lyrata HOM05D007626 ORTHO05D009633 3.2e-52 209.1 211 56.4
BcaB02g10540 Brassica carinata HOM05D007626 ORTHO05D009633 4.1e-52 208.8 210 57.6
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 4.1e-52 208.8 213 56.3
Gohir.D11G249701 Gossypium hirsutum HOM05D007626 ORTHO05D009633 4.1e-52 208.8 216 55.6
Gorai.007G267500 Gossypium raimondii HOM05D007626 ORTHO05D009633 4.1e-52 208.8 216 55.6
Carub.0004s1473 Capsella rubella HOM05D007626 ORTHO05D009633 1.2e-51 207.2 211 55.5
Nitab4.5_0006279g0010 Nicotiana tabacum HOM05D007626 ORTHO05D009633 1.2e-51 207.2 212 54.7
FvH4_2g12801 Fragaria vesca HOM05D007626 ORTHO05D009633 3.5e-51 205.7 209 56.9
Sp4g15570 Schrenkiella parvula HOM05D007626 ORTHO05D009633 4.6e-51 205.3 210 56.7
AT2G33260 Arabidopsis thaliana HOM05D007626 ORTHO05D009633 6.0e-51 204.9 211 55.9
Haze_19399 Corylus avellana HOM05D007626 ORTHO05D009633 3.9e-50 202.2 205 56.6
GSVIVG01033375001 Vitis vinifera HOM05D007626 ORTHO05D009633 5.1e-50 201.8 209 55.5
PSO541G2066 Papaver somniferum HOM05D007626 ORTHO05D009633 1.5e-49 200.3 228 51.3
BcaC02g11413 Brassica carinata HOM05D007626 ORTHO05D009633 4.3e-49 198.7 211 55.0
C04p15840 Brassica napus HOM05D007626 ORTHO05D009633 5.6e-49 198.4 211 55.9
BolC4t23153H Brassica oleracea HOM05D007626 ORTHO05D009633 5.6e-49 198.4 211 55.9
EL10Ac5g11761 Beta vulgaris HOM05D007626 ORTHO05D009633 9.5e-49 197.6 211 52.6
A05p12260 Brassica napus HOM05D007626 ORTHO05D009633 2.8e-48 196.1 211 54.5
BraA05t20167Z Brassica rapa HOM05D007626 ORTHO05D009633 2.8e-48 196.1 211 54.5
Lj2P356T34 Lonicera japonica HOM05D007626 ORTHO05D009633 2.8e-48 196.1 209 56.0
PSO675G9388 Papaver somniferum HOM05D007626 ORTHO05D009633 2.8e-48 196.1 224 50.9
AUR62036270 Chenopodium quinoa HOM05D007626 ORTHO05D009633 6.2e-48 194.9 213 54.0
Nn2g15914 Nelumbo nucifera HOM05D007626 ORTHO05D009633 8.1e-48 194.5 208 54.8
Ah.12g059720 Amaranthus hybridus HOM05D007626 ORTHO05D009633 1.1e-47 194.1 211 54.5
MBI19_g24067_MAGBIO Magnolia biondii HOM05D007626 ORTHO05D009633 7.6e-46 188.0 246 47.6
Aa31LG5G4160 Aethionema arabicum HOM05D007626 ORTHO05D009633 9.9e-46 187.6 210 53.3
Rhsim04G0085500 Rhododendron simsii HOM05D007626 ORTHO05D009633 1.3e-45 187.2 189 56.6
Aqoxy2G00014 Aquilegia oxysepala HOM05D007626 ORTHO05D009633 3.8e-45 185.7 225 49.3
DCAR_019892 Daucus carota HOM05D007626 ORTHO05D009633 6.4e-45 184.9 220 53.2
DCAR_019894 Daucus carota HOM05D007626 ORTHO05D009633 6.4e-45 184.9 220 53.2
FAN27G0900 Fragaria x ananassa HOM05D007626 ORTHO05D009633 6.0e-43 178.3 211 53.1
FAN15G3689 Fragaria x ananassa HOM05D007626 ORTHO05D009633 3.0e-42 176.0 183 56.3
FAN24G1235 Fragaria x ananassa HOM05D007626 ORTHO05D009633 3.0e-42 176.0 211 52.6
DCAR_019893 Daucus carota HOM05D007626 ORTHO05D009633 3.9e-42 175.6 214 51.9
DCAR_019895 Daucus carota HOM05D007626 ORTHO05D009633 3.9e-42 175.6 214 51.9
Os07g0225100 Oryza sativa ssp. japonica HOM05D007626 ORTHO05D009633 8.7e-42 174.5 214 46.7
Hma1.2p1_0183F.1_g081040 Hydrangea macrophylla HOM05D007626 ORTHO05D009633 4.8e-40 168.7 184 54.9
MD14G1001300 Malus domestica HOM05D007626 ORTHO05D009633 6.9e-39 164.9 197 52.8
Atru.BG.146.p Acer truncatum HOM05D007626 ORTHO05D009633 9.0e-39 164.5 183 54.6
CDE04G2338 Ceratophyllum demersum HOM05D007626 ORTHO05D009633 2.0e-38 163.3 219 47.5
HPP92_019029 Vanilla planifolia HOM05D007626 ORTHO05D009633 3.4e-38 162.5 242 44.2
ATR0022G037 Amborella trichopoda HOM05D007626 ORTHO05D009633 4.4e-38 162.2 227 46.3
Actinidia38623 Actinidia chinensis HOM05D007626 ORTHO05D009633 3.8e-37 159.1 184 51.6
Cc00_g19960 Coffea canephora HOM05D007626 ORTHO05D009633 3.5e-35 152.5 192 46.4
Hund10821 Selenicereus undatus HOM05D007626 ORTHO05D009633 4.6e-35 152.1 185 48.1
AUR62039720 Chenopodium quinoa HOM05D007626 ORTHO05D009633 2.3e-26 123.2 213 40.4
Pp3c10_5160 Physcomitrium patens HOM05D007626 ORTHO05D009633 3.3e-25 119.4 212 35.4
Mapoly0013s0120 Marchantia polymorpha HOM05D007626 ORTHO05D009633 3.7e-24 115.9 220 39.1
SEGI_16239 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 2.9e-21 106.3 320 29.4
SEGI_12738 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 4.9e-21 105.5 315 32.1
SEGI_02397 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 1.9e-20 103.6 257 32.7
BcaC02g11414 Brassica carinata HOM05D007626 ORTHO05D009633 6.0e-19 98.6 94 62.8
SEGI_04120 Sequoiadendron giganteum HOM05D007626 ORTHO05D009633 1.3e-18 97.4 317 28.4
AagrBONN_evm.TU.Sc2ySwM_368.520 Anthoceros agrestis HOM05D007626 ORTHO05D009633 1.3e-16 90.9 209 34.4
Atru.chr2.1268 Acer truncatum HOM05D007626 ORTHO05D009633 2.8e-08 63.2 45 75.6
SalBow3G0063 Salvia bowleyana HOM05D003587 ORTHO05D004139 1.2e-06 57.8 183 28.4
Psat0s2703g0240 Pisum sativum HOM05D003587 ORTHO05D004139 4.5e-06 55.8 201 25.9
Ca_06175_v3 Cicer arietinum L. HOM05D003587 ORTHO05D004139 7.7e-06 55.1 201 24.4


User provided reference genes

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