Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 6.7e-125 450.7 224 100.0
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.1e-98 362.1 224 79.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 3.6e-94 348.6 225 76.4
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.5e-79 300.1 226 63.7
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 1.5e-79 300.1 233 63.9
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.4e-77 293.5 226 61.9
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.1e-74 283.9 227 62.1
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.0e-72 277.3 198 67.2
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.1e-69 267.3 228 57.9
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.4e-69 266.9 225 60.4
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 1.5e-68 263.5 225 59.6
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.9e-67 259.2 196 61.7
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 7.1e-66 254.6 145 84.8
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 5.2e-61 238.4 204 57.4
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 2.2e-59 233.0 196 53.6
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.2e-57 227.3 196 54.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.2e-57 227.3 196 56.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.0e-57 224.9 196 53.1
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.0e-57 224.9 196 53.1
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.3e-56 223.8 197 52.8
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.7e-56 223.4 195 54.4
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.3e-56 223.0 222 48.6
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.9e-56 222.2 197 53.8
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 5.6e-55 218.4 196 52.0
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 1.2e-54 217.2 196 52.0
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.1e-54 216.5 206 51.5
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 4.7e-54 215.3 196 51.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 6.2e-54 214.9 197 55.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 1.1e-53 214.2 200 50.5
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 5.2e-53 211.8 230 47.0
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 6.8e-53 211.5 224 48.7
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 2.0e-52 209.9 196 52.0
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 4.4e-52 208.8 224 46.9
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.3e-51 207.2 226 46.5
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 8.4e-51 204.5 197 50.3
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 2.4e-50 203.0 172 52.3
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 4.2e-50 202.2 195 50.8
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.6e-49 200.3 224 44.6
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 2.1e-49 199.9 224 45.5
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 2.7e-49 199.5 182 51.1
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 2.7e-49 199.5 229 44.1
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 2.7e-49 199.5 196 46.9
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.0e-48 197.6 197 48.7
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.0e-48 196.1 197 48.7
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 3.0e-48 196.1 228 39.9
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.9e-48 195.7 196 50.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.9e-48 195.7 196 50.0
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 8.7e-48 194.5 205 43.9
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 1.1e-47 194.1 207 45.4
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.9e-47 193.4 199 46.2
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.5e-47 193.0 196 49.0
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 5.6e-47 191.8 202 45.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 5.6e-47 191.8 205 47.3
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.3e-47 191.4 207 44.9
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 9.6e-47 191.0 207 44.4
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.1e-46 189.9 207 44.4
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.8e-46 188.7 198 45.5
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 6.2e-46 188.3 199 44.7
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.1e-46 188.0 207 43.5
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 9.0e-45 184.5 209 43.1
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.2e-44 184.1 233 42.9
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.5e-44 183.7 163 51.5
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 3.4e-44 182.6 147 57.1
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.4e-44 182.2 240 42.5
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.7e-43 180.3 200 44.5
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 2.2e-43 179.9 233 39.9
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 6.4e-43 178.3 232 40.1
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 6.4e-43 178.3 183 44.3
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 8.4e-43 177.9 233 39.5
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.2e-42 176.0 229 42.8
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 9.3e-42 174.5 232 38.8
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 9.3e-42 174.5 234 39.3
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.2e-41 174.1 224 39.3
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.6e-41 173.7 233 38.6
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.7e-41 172.9 212 42.0
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 4.6e-41 172.2 198 41.4
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 7.9e-41 171.4 198 41.4
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.0e-40 171.0 233 41.2
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.6e-38 163.7 198 39.9
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 8.1e-38 161.4 194 40.7
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 8.1e-38 161.4 260 37.7
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 6.9e-37 158.3 196 38.3
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.5e-36 157.1 278 31.7
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 4.5e-36 155.6 205 38.0
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 5.8e-36 155.2 176 41.5
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.3e-35 154.1 185 40.0
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 3.8e-35 152.5 197 42.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.1e-34 151.0 187 40.1
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.4e-34 149.8 195 40.0
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 8.7e-32 141.4 208 37.0
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.8e-30 136.3 197 34.5
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 4.0e-29 132.5 116 50.9
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.1e-26 124.4 148 43.9
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 1.2e-25 120.9 161 41.6
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.3e-22 110.9 128 42.2
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.1e-21 105.9 82 53.7
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 6.9e-21 105.1 123 42.3
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 1.7e-19 100.5 90 45.6
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 7.2e-18 95.1 71 52.1
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 3.6e-17 92.8 112 39.3
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 3.7e-14 82.8 195 28.2
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.1e-13 79.7 197 27.4
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.2e-11 73.6 79 43.0
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.9e-11 73.2 74 48.6
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 3.0e-08 63.2 220 24.5
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.7e-07 58.9 59 44.1


User provided reference genes

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