Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04398_v3 Cicer arietinum L. HOM05D007750 ORTHO05D009803 1.9e-107 394.0 205 100.0
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 1.4e-89 334.7 205 83.9
Medtr6g022260 Medicago truncatula HOM05D007750 ORTHO05D009803 1.7e-87 327.8 204 81.9
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 4.9e-87 326.2 205 82.4
Lj2g0016115 Lotus japonicus HOM05D007750 ORTHO05D009803 5.6e-75 286.2 205 73.7
Glyma.07G217200 Glycine max HOM05D007750 ORTHO05D009803 3.2e-70 270.4 205 71.2
Glyma.06G033500 Glycine max HOM05D007750 ORTHO05D009803 2.1e-69 267.7 205 70.7
Phvul.003G092000 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 2.1e-69 267.7 200 70.0
Phvul.003G091900 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 3.5e-69 266.9 206 69.4
VMungo1215G1573 Vigna mungo HOM05D007750 ORTHO05D009803 2.1e-66 257.7 191 70.2
Glyma.17G016400 Glycine max HOM05D007750 ORTHO05D009803 5.2e-65 253.1 205 67.3
arahy.Tifrunner.gnm1.ann1.T5BWJF Arachis hypogaea HOM05D007750 ORTHO05D009803 1.9e-62 244.6 201 66.2
Lalb_Chr12g0196171 Lupinus albus HOM05D007750 ORTHO05D009803 2.3e-60 237.7 205 63.9
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 6.6e-60 236.1 204 61.8
arahy.Tifrunner.gnm1.ann1.7C1NTJ Arachis hypogaea HOM05D007750 ORTHO05D009803 3.3e-59 233.8 191 66.5
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 3.1e-57 227.3 204 59.3
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 1.2e-56 225.3 205 57.1
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 2.9e-55 220.7 205 56.6
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 4.9e-55 219.9 205 57.1
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 8.4e-55 219.2 205 57.1
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 4.2e-54 216.9 205 56.6
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.7e-52 211.5 205 53.7
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 1.1e-51 208.8 205 54.1
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 1.9e-51 208.0 206 55.8
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 3.3e-51 207.2 205 55.1
Manes.02G132900 Manihot esculenta HOM05D007750 ORTHO05D009803 5.6e-51 206.5 199 57.3
MD03G1092900 Malus domestica HOM05D007750 ORTHO05D009803 4.8e-50 203.4 205 54.1
Gohir.A03G042099 Gossypium hirsutum HOM05D007750 ORTHO05D009803 8.1e-50 202.6 200 56.0
Gorai.003G131800 Gossypium raimondii HOM05D007750 ORTHO05D009803 1.4e-49 201.8 200 55.5
Gohir.D03G125600 Gossypium hirsutum HOM05D007750 ORTHO05D009803 3.1e-49 200.7 200 55.5
Atru.chr3.3911 Acer truncatum HOM05D007750 ORTHO05D009803 4.0e-49 200.3 203 54.7
Aqoxy496s001 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 9.0e-49 199.1 206 53.4
Aqoxy4G02931 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 9.0e-49 199.1 206 53.4
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 2.6e-48 197.6 193 56.0
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 4.5e-48 196.8 192 54.2
Duzib150G0757 Durio zibethinus HOM05D007750 ORTHO05D009803 2.9e-47 194.1 201 53.7
Aqoxy7G03815 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 3.8e-47 193.7 206 51.9
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 3.8e-47 193.7 192 54.7
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 4.9e-47 193.4 192 53.6
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 4.9e-47 193.4 192 53.6
Thecc.09G321000 Theobroma cacao HOM05D007750 ORTHO05D009803 2.4e-46 191.0 193 54.9
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 3.2e-46 190.7 193 51.8
Thhalv10028537m.g Eutrema salsugineum HOM05D007750 ORTHO05D009803 4.2e-46 190.3 200 52.5
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 1.2e-45 188.7 202 50.5
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 1.2e-45 188.7 202 52.5
Nn1g04208 Nelumbo nucifera HOM05D007750 ORTHO05D009803 1.8e-44 184.9 206 49.0
RcHm_v2.0_Chr5g0064671 Rosa chinensis HOM05D007750 ORTHO05D009803 1.8e-44 184.9 192 53.6
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 3.0e-44 184.1 200 50.5
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 3.9e-44 183.7 200 50.0
Aa31LG9G10670 Aethionema arabicum HOM05D007750 ORTHO05D009803 8.7e-44 182.6 201 51.2
Cc01_g12900 Coffea canephora HOM05D007750 ORTHO05D009803 8.7e-44 182.6 200 49.0
BraA09t38312Z Brassica rapa HOM05D007750 ORTHO05D009803 1.5e-43 181.8 200 50.5
Sp6g05780 Schrenkiella parvula HOM05D007750 ORTHO05D009803 4.3e-43 180.3 197 50.3
A09p27430 Brassica napus HOM05D007750 ORTHO05D009803 2.8e-42 177.6 200 50.0
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 5.3e-41 173.3 199 45.7
Migut.N02392 Erythranthe guttata HOM05D007750 ORTHO05D009803 1.2e-40 172.2 202 46.0
Sopen08g028580 Solanum pennellii HOM05D007750 ORTHO05D009803 2.6e-40 171.0 199 46.2
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 4.5e-40 170.2 200 48.0
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 4.5e-40 170.2 200 48.0
CAN.G981.43 Capsicum annuum HOM05D007750 ORTHO05D009803 4.5e-40 170.2 198 47.0
Glyma.07G257600 Glycine max HOM05D007750 ORTHO05D009803 1.1e-38 165.6 205 50.7
Potri.017G131600 Populus trichocarpa HOM05D007750 ORTHO05D009803 2.5e-38 164.5 200 49.0
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 1.5e-35 155.2 153 51.6
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 1.9e-35 154.8 201 43.8
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 4.3e-35 153.7 203 44.3
SalBow3G4043 Salvia bowleyana HOM05D007750 ORTHO05D009803 5.7e-35 153.3 201 42.3
Sc21g0005800 Simmondsia chinensis HOM05D007750 ORTHO05D009803 3.7e-34 150.6 199 43.7
Actinidia07034 Actinidia chinensis HOM05D007750 ORTHO05D009803 1.7e-31 141.7 188 46.3
Sabra17G0109600 Salix brachista HOM05D007750 ORTHO05D009803 1.7e-31 141.7 113 62.8
AUR62018631 Chenopodium quinoa HOM05D007750 ORTHO05D009803 3.5e-29 134.0 173 43.9
PGR083G0657 Punica granatum HOM05D007750 ORTHO05D009803 7.9e-29 132.9 203 44.8
BcaB01g01674 Brassica carinata HOM05D007750 ORTHO05D009803 1.5e-27 128.6 187 42.8
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 2.5e-27 127.9 205 37.1
Lj1P153T20 Lonicera japonica HOM05D007750 ORTHO05D009803 3.3e-27 127.5 109 56.9
COL.COLO4_18513 Corchorus olitorius HOM05D007750 ORTHO05D009803 1.6e-26 125.2 199 40.2
ClCG09G016230 Citrullus lanatus HOM05D007750 ORTHO05D009803 7.7e-24 116.3 153 43.1
Ciclev10030066m.g Citrus clementina HOM05D007750 ORTHO05D009803 3.2e-22 110.9 203 37.9
AL6G46300 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 5.5e-22 110.2 85 64.7
AL6G46430 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 5.5e-22 110.2 85 64.7
EL10Ac5g12003 Beta vulgaris HOM05D007750 ORTHO05D009803 4.3e-19 100.5 85 55.3
CsaV3_7G007090 Cucumis sativus L. HOM05D007750 ORTHO05D009803 6.3e-18 96.7 149 40.9
Oeu012315.1 Olea europaea HOM05D007750 ORTHO05D009803 1.1e-17 95.9 85 52.9
Nitab4.5_0007891g0010 Nicotiana tabacum HOM05D007750 ORTHO05D009803 5.3e-17 93.6 85 52.9
Nitab4.5_0001714g0210 Nicotiana tabacum HOM05D007750 ORTHO05D009803 2.0e-16 91.7 85 52.9
Hma1.2p1_0418F.1_g149220 Hydrangea macrophylla HOM05D007750 ORTHO05D009803 2.2e-15 88.2 58 67.2
Eucgr.H02967 Eucalyptus grandis HOM05D007750 ORTHO05D009803 2.0e-11 75.1 86 44.2
SEGI_21882 Sequoiadendron giganteum HOM05D007750 ORTHO05D009431 4.8e-10 70.5 138 32.6
ATR0807G010 Amborella trichopoda HOM05D006556 ORTHO05D008146 5.3e-09 67.0 110 30.9
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.6e-08 65.5 167 29.9
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 3.5e-08 64.3 180 31.1
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 3.5e-08 64.3 180 31.1
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 7.7e-08 63.2 180 30.6
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 1.0e-07 62.8 180 29.4
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 3.8e-07 60.8 106 31.1
AL7G14330 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.8e-07 60.8 111 29.7
BraA03t09431Z Brassica rapa HOM05D007455 ORTHO05D009431 3.8e-07 60.8 180 28.9
Lsat_1_v5_gn_9_106260 Lactuca sativa HOM05D007455 ORTHO05D009431 3.8e-07 60.8 180 26.7
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 5.0e-07 60.5 173 30.1
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 8.5e-07 59.7 158 30.4
Lalb_Chr01g0006871 Lupinus albus HOM05D002453 ORTHO05D008746 1.5e-06 58.9 105 30.5
VMungo1080G1467 Vigna mungo HOM05D007085 ORTHO05D008828 1.9e-06 58.5 103 38.8
AT4G36680 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 4.2e-06 57.4 111 27.9
Carub.0007s0364 Capsella rubella HOM05D000891 ORTHO05D000761 4.2e-06 57.4 111 29.7
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 4.2e-06 57.4 206 24.3
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 5.5e-06 57.0 180 26.7
SalBow2G1681 Salvia bowleyana HOM05D000891 ORTHO05D000761 7.2e-06 56.6 107 35.5
SalBow2G3131 Salvia bowleyana HOM05D000891 ORTHO05D000761 7.2e-06 56.6 107 35.5
CANSAT01G1424 Cannabis sativa HOM05D000891 ORTHO05D000761 9.4e-06 56.2 108 32.4


User provided reference genes

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