Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 1.1e-62 243.0 118 100.0
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 1.2e-32 143.3 110 72.7
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 1.1e-28 130.2 97 69.1
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 8.9e-28 127.1 111 65.8
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 1.3e-26 123.2 97 68.0
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 9.6e-22 107.1 104 61.5
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 1.6e-21 106.3 109 56.9
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 4.8e-21 104.8 110 53.6
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.1e-20 103.6 110 52.7
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 9.0e-20 100.5 115 56.5
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 2.0e-19 99.4 110 53.6
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 2.0e-19 99.4 123 46.3
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 2.6e-19 99.0 100 58.0
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 2.6e-19 99.0 101 58.4
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 7.6e-19 97.4 111 54.1
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 1.7e-18 96.3 99 51.5
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 2.9e-18 95.5 120 50.0
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 1.4e-17 93.2 110 52.7
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 1.6e-16 89.7 112 49.1
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 2.1e-16 89.4 108 49.1
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 2.7e-16 89.0 110 50.0
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 6.0e-16 87.8 109 48.6
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 7.9e-16 87.4 110 47.3
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 7.9e-16 87.4 109 49.5
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 2.3e-15 85.9 104 53.8
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 3.0e-15 85.5 88 53.4
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 5.1e-15 84.7 72 58.3
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 1.1e-14 83.6 101 46.5
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 1.1e-14 83.6 101 49.5
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 1.5e-14 83.2 111 48.6
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 2.5e-14 82.4 105 45.7
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 4.3e-14 81.6 112 48.2
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 4.3e-14 81.6 109 43.1
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 5.6e-14 81.3 100 45.0
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.3e-13 80.1 100 45.0
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.6e-13 79.7 112 47.3
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.6e-13 79.7 78 50.0
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.6e-13 79.7 100 45.0
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 1.6e-13 79.7 106 45.3
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 2.1e-13 79.3 109 49.5
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 3.7e-13 78.6 108 43.5
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 3.7e-13 78.6 108 43.5
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 4.8e-13 78.2 106 46.2
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 6.2e-13 77.8 103 45.6
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 6.2e-13 77.8 88 48.9
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 6.2e-13 77.8 107 44.9
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.1e-12 77.0 80 51.2
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 1.4e-12 76.6 108 44.4
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.4e-12 76.6 126 42.1
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 1.8e-12 76.3 62 56.5
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 2.4e-12 75.9 110 42.7
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 3.1e-12 75.5 94 45.7
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 6.9e-12 74.3 103 48.5
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 1.5e-11 73.2 69 55.1
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 2.0e-11 72.8 66 56.1
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 2.6e-11 72.4 105 42.9
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 4.5e-11 71.6 49 63.3
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 4.5e-11 71.6 115 41.7
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.5e-11 71.6 100 42.0
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 4.5e-11 71.6 74 47.3
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 7.6e-11 70.9 92 44.6
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 9.9e-11 70.5 104 46.2
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 9.9e-11 70.5 108 41.7
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 1.7e-10 69.7 107 43.9
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.7e-10 69.7 50 64.0
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 2.2e-10 69.3 101 47.5
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 2.2e-10 69.3 90 43.3
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 2.2e-10 69.3 108 40.7
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.9e-10 68.9 103 43.7
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 1.1e-09 67.0 86 47.7
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.1e-09 67.0 63 50.8
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 1.1e-09 67.0 101 44.6
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 1.1e-09 67.0 87 46.0
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 1.4e-09 66.6 69 50.7
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 1.4e-09 66.6 92 47.8
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 1.4e-09 66.6 77 51.9
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 2.4e-09 65.9 122 36.9
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.4e-09 65.9 103 42.7
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.4e-09 65.9 103 42.7
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 2.4e-09 65.9 98 41.8
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 2.4e-09 65.9 73 50.7
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 3.2e-09 65.5 124 38.7
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 3.2e-09 65.5 104 44.2
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 3.2e-09 65.5 86 45.3
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 4.2e-09 65.1 105 42.9
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 4.2e-09 65.1 61 52.5
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 4.2e-09 65.1 61 52.5
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 5.5e-09 64.7 99 37.4
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 5.5e-09 64.7 63 49.2
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 7.1e-09 64.3 83 42.2
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 7.1e-09 64.3 83 42.2
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 7.1e-09 64.3 83 42.2
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 9.3e-09 63.9 80 42.5
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 9.3e-09 63.9 103 39.8
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 1.2e-08 63.5 71 43.7
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 1.6e-08 63.2 46 65.2
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 1.6e-08 63.2 65 49.2
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 2.1e-08 62.8 66 50.0
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 2.7e-08 62.4 80 41.2
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 2.7e-08 62.4 41 63.4
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea HOM05D006882 ORTHO05D008688 3.5e-08 62.0 46 65.2
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 6.0e-08 61.2 42 69.0
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 6.0e-08 61.2 48 64.6
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 1.3e-07 60.1 52 57.7
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 3.0e-07 58.9 102 40.2
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 3.0e-07 58.9 55 54.5
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.9e-07 58.5 78 41.0
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 6.7e-07 57.8 50 60.0
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 3.3e-06 55.5 62 48.4
HanXRQChr09g0272731 Helianthus annuus HOM05D006882 ORTHO05D048217 5.6e-06 54.7 39 61.5


User provided reference genes

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