Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04220_v3 Cicer arietinum L. HOM05D005889 ORTHO05D007495 1.2e-76 290.0 182 100.0
Medtr6g007887 Medicago truncatula HOM05D005889 ORTHO05D007495 4.7e-52 208.4 188 74.5
Psat1g080040 Pisum sativum HOM05D005889 ORTHO05D007495 2.3e-51 206.1 193 71.5
Lj2g0018244 Lotus japonicus HOM05D005889 ORTHO05D007495 3.1e-51 205.7 184 69.0
Phvul.004G019800 Phaseolus vulgaris HOM05D005889 ORTHO05D007495 4.4e-42 175.3 186 60.2
Glyma.13G070100 Glycine max HOM05D005889 ORTHO05D007495 4.6e-39 165.2 155 61.9
Glyma.19G012900 Glycine max HOM05D005889 ORTHO05D007495 4.6e-39 165.2 189 56.1
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 6.8e-35 151.4 98 80.6
arahy.Tifrunner.gnm1.ann1.LQS8H1 Arachis hypogaea HOM05D005889 ORTHO05D007495 8.4e-33 144.4 96 76.0
arahy.Tifrunner.gnm1.ann1.XH0R3V Arachis hypogaea HOM05D005889 ORTHO05D007495 8.4e-33 144.4 96 76.0
MD17G1039100 Malus domestica HOM05D005889 ORTHO05D007495 1.4e-32 143.7 96 74.0
Prupe.3G279900 Prunus persica HOM05D005889 ORTHO05D007495 2.4e-32 142.9 98 73.5
QL02p077702 Quercus lobata HOM05D005889 ORTHO05D007495 1.2e-31 140.6 187 48.7
Cfa007463 Carpinus fangiana HOM05D001690 ORTHO05D002627 3.5e-31 139.0 93 74.2
FvH4_6g50270 Fragaria vesca HOM05D005889 ORTHO05D007495 3.5e-31 139.0 98 71.4
FAN14G2248 Fragaria x ananassa HOM05D005889 ORTHO05D007495 3.5e-31 139.0 98 71.4
CSS0022009 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 4.6e-31 138.7 93 74.2
RcHm_v2.0_Chr2g0170581 Rosa chinensis HOM05D005889 ORTHO05D007495 6.0e-31 138.3 98 71.4
Sed0023571 Sechium edule HOM05D005889 ORTHO05D007495 6.0e-31 138.3 93 73.1
A02p02770 Brassica napus HOM05D005889 ORTHO05D007495 1.0e-30 137.5 192 46.9
CiPaw.03G035200 Carya illinoinensis HOM05D005889 ORTHO05D007495 1.0e-30 137.5 93 74.2
THA.LOC104821069 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 1.0e-30 137.5 90 76.7
Eucgr.J02175 Eucalyptus grandis HOM05D005889 ORTHO05D007495 3.9e-30 135.6 92 76.1
MELO3C009927.2 Cucumis melo HOM05D005889 ORTHO05D007495 5.1e-30 135.2 92 72.8
CARHR198430 Cardamine hirsuta HOM05D005889 ORTHO05D007495 6.6e-30 134.8 90 74.4
Nitab4.5_0001952g0130 Nicotiana tabacum HOM05D005889 ORTHO05D007495 6.6e-30 134.8 92 76.1
Potri.001G350500 Populus trichocarpa HOM05D005889 ORTHO05D007495 6.6e-30 134.8 94 73.4
Ah.16g106950 Amaranthus hybridus HOM05D005889 ORTHO05D007495 8.6e-30 134.4 95 71.6
BcaNung03088 Brassica carinata HOM05D005889 ORTHO05D007495 1.1e-29 134.0 90 74.4
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 1.1e-29 134.0 90 74.4
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 1.1e-29 134.0 90 74.4
FAN02G1209 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.1e-29 134.0 100 70.0
FAN09G4317 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.1e-29 134.0 100 70.0
Actinidia06039 Actinidia chinensis HOM05D005889 ORTHO05D007495 1.9e-29 133.3 188 47.3
CsaV3_3G042070 Cucumis sativus L. HOM05D005889 ORTHO05D007495 1.9e-29 133.3 92 71.7
Sc20g0002790 Simmondsia chinensis HOM05D005889 ORTHO05D007495 1.9e-29 133.3 97 70.1
FAN05G0142 Fragaria x ananassa HOM05D005889 ORTHO05D007495 2.5e-29 132.9 100 69.0
Thecc.04G004200 Theobroma cacao HOM05D005889 ORTHO05D007495 2.5e-29 132.9 92 72.8
CANSAT64G0610 Cannabis sativa HOM05D005889 ORTHO05D007495 3.3e-29 132.5 95 70.5
CANSAT64G2621 Cannabis sativa HOM05D005889 ORTHO05D007495 3.3e-29 132.5 95 70.5
Migut.K01361 Erythranthe guttata HOM05D005889 ORTHO05D007495 3.3e-29 132.5 92 71.7
Thhalv10014795m.g Eutrema salsugineum HOM05D005889 ORTHO05D007495 3.3e-29 132.5 90 73.3
Sabra16G0230000 Salix brachista HOM05D005889 ORTHO05D007495 3.3e-29 132.5 94 72.3
Sopen02g031900 Solanum pennellii HOM05D005889 ORTHO05D007495 4.3e-29 132.1 92 72.8
PGSC0003DMG400000508 Solanum tuberosum HOM05D005889 ORTHO05D007495 4.3e-29 132.1 92 72.8
Manes.17G118700 Manihot esculenta HOM05D005889 ORTHO05D007495 5.6e-29 131.7 193 53.9
BraA02t05248Z Brassica rapa HOM05D005889 ORTHO05D007495 9.6e-29 131.0 179 51.4
Carub.0006s1306 Capsella rubella HOM05D005889 ORTHO05D007495 9.6e-29 131.0 182 46.2
Solyc02g087150.3 Solanum lycopersicum HOM05D005889 ORTHO05D007495 9.6e-29 131.0 92 71.7
AUR62032095 Chenopodium quinoa HOM05D005889 ORTHO05D007495 1.2e-28 130.6 151 50.3
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 1.2e-28 130.6 92 70.7
Manes.15G180360 Manihot esculenta HOM05D005889 ORTHO05D007495 1.2e-28 130.6 190 54.2
CAN.G206.53 Capsicum annuum HOM05D005889 ORTHO05D007495 1.6e-28 130.2 92 72.8
Peaxi162Scf00129g00825 Petunia axillaris HOM05D005889 ORTHO05D007495 1.6e-28 130.2 95 69.5
PGR083G2278 Punica granatum HOM05D005889 ORTHO05D007495 1.6e-28 130.2 94 70.2
Gorai.001G259800 Gossypium raimondii HOM05D005889 ORTHO05D007495 2.1e-28 129.8 92 71.7
MBI14_g19739_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 2.1e-28 129.8 185 51.9
Atru.chr8.2424 Acer truncatum HOM05D005889 ORTHO05D007495 2.8e-28 129.4 93 68.8
Nn4g22882 Nelumbo nucifera HOM05D005889 ORTHO05D007495 2.8e-28 129.4 98 66.3
Rhsim10G0026400 Rhododendron simsii HOM05D005889 ORTHO05D007495 2.8e-28 129.4 188 46.8
Ciclev10012884m.g Citrus clementina HOM05D005889 ORTHO05D007495 3.6e-28 129.0 184 45.7
Cc07_g02540 Coffea canephora HOM05D005889 ORTHO05D007495 3.6e-28 129.0 92 71.7
Gohir.D07G225400 Gossypium hirsutum HOM05D005889 ORTHO05D007495 3.6e-28 129.0 92 71.7
BcaNung05888 Brassica carinata HOM05D005889 ORTHO05D007495 4.7e-28 128.6 176 56.8
C02p07380 Brassica napus HOM05D005889 ORTHO05D007495 4.7e-28 128.6 176 56.8
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 4.7e-28 128.6 183 50.8
BolC2t06669H Brassica oleracea HOM05D005889 ORTHO05D007495 4.7e-28 128.6 176 56.8
Sed0001958 Sechium edule HOM05D005889 ORTHO05D007495 4.7e-28 128.6 92 70.7
BcaB01g05094 Brassica carinata HOM05D005889 ORTHO05D007495 6.2e-28 128.3 183 50.3
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 6.2e-28 128.3 183 50.3
Duzib147G1282 Durio zibethinus HOM05D005889 ORTHO05D007495 6.2e-28 128.3 92 70.7
SalBow1G5017 Salvia bowleyana HOM05D005889 ORTHO05D007495 6.2e-28 128.3 173 48.0
PSO832G3377 Papaver somniferum HOM05D005889 ORTHO05D007495 8.1e-28 127.9 168 46.4
AT5G14910 Arabidopsis thaliana HOM05D005889 ORTHO05D007495 1.1e-27 127.5 178 46.1
MSTRG.15501 Avicennia marina HOM05D005889 ORTHO05D007495 1.1e-27 127.5 92 70.7
Lsat_1_v5_gn_2_92760 Lactuca sativa HOM05D005889 ORTHO05D007495 1.4e-27 127.1 90 68.9
Sp6g29140 Schrenkiella parvula HOM05D005889 ORTHO05D007495 1.8e-27 126.7 84 75.0
Rhsim10G0026900 Rhododendron simsii HOM05D005889 ORTHO05D007495 4.0e-27 125.6 189 46.0
Hma1.2p1_0697F.1_g204970 Hydrangea macrophylla HOM05D005889 ORTHO05D007495 6.9e-27 124.8 191 46.6
PSO063G7534 Papaver somniferum HOM05D005889 ORTHO05D007495 6.9e-27 124.8 93 68.8
DCAR_011198 Daucus carota HOM05D005889 ORTHO05D007495 8.9e-27 124.4 192 43.8
ECA238G1302 Erigeron canadensis HOM05D005889 ORTHO05D007495 1.5e-26 123.6 90 65.6
THA.LOC104822380 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 1.5e-26 123.6 183 51.4
Aqoxy3G03079 Aquilegia oxysepala HOM05D005889 ORTHO05D007495 2.0e-26 123.2 166 46.4
CDE01G0491 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 2.0e-26 123.2 92 67.4
HanXRQChr12g0385561 Helianthus annuus HOM05D005889 ORTHO05D007495 2.0e-26 123.2 90 66.7
TWI56G0856 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 2.0e-26 123.2 92 68.5
TAR371G1159 Trochodendron aralioides HOM05D005889 ORTHO05D007495 2.0e-26 123.2 183 43.7
ClCG10G014500 Citrullus lanatus HOM05D005889 ORTHO05D007495 4.4e-26 122.1 92 68.5
SGA_v2.0_scaffold205G41723 Striga asiatica HOM05D005889 ORTHO05D007495 4.4e-26 122.1 92 67.4
Oeu047335.1 Olea europaea HOM05D005889 ORTHO05D007495 9.9e-26 120.9 88 69.3
unitig_21.g20501 Utricularia gibba HOM05D005889 ORTHO05D007495 9.9e-26 120.9 92 66.3
Lj7C409T13 Lonicera japonica HOM05D005889 ORTHO05D007495 1.3e-25 120.6 93 65.6
GSVIVG01032527001 Vitis vinifera HOM05D005889 ORTHO05D007495 1.3e-25 120.6 80 75.0
Hund20036 Selenicereus undatus HOM05D005889 ORTHO05D007495 2.2e-25 119.8 139 48.9
CDE02G1560 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 4.9e-25 118.6 92 65.2
HanXRQChr14g0448791 Helianthus annuus HOM05D005889 ORTHO05D007495 4.9e-25 118.6 90 65.6
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 1.9e-24 116.7 156 51.9
CSS0046645 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 2.4e-24 116.3 186 45.7
vmacro05795 Vaccinium macrocarpon HOM05D005889 ORTHO05D007495 3.2e-24 115.9 116 56.0
Nitab4.5_0005206g0020 Nicotiana tabacum HOM05D005889 ORTHO05D007495 5.4e-24 115.2 92 68.5
EL10Ac2g03378 Beta vulgaris HOM05D005889 ORTHO05D007495 7.1e-24 114.8 78 70.5
CSS0028338 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 7.1e-24 114.8 183 46.4
TWI12G0403 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 1.6e-23 113.6 183 50.3
MBI14_g42400_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 7.8e-23 111.3 216 43.1
Aa31LG11G14590 Aethionema arabicum HOM05D005889 ORTHO05D007495 1.7e-22 110.2 213 39.9
Lalb_Chr21g0319321 Lupinus albus HOM05D000340 ORTHO05D000821 3.9e-22 109.0 77 71.4
BcaB01g05020 Brassica carinata HOM05D005889 ORTHO05D007495 5.1e-22 108.6 75 72.0
Os05g0337400 Oryza sativa ssp. japonica HOM05D005889 ORTHO05D007495 7.3e-21 104.8 90 61.1
Zm00001eb286710 Zea mays HOM05D005889 ORTHO05D007495 2.1e-20 103.2 92 56.5
Pp3c2_14600 Physcomitrium patens HOM05D005889 ORTHO05D007495 4.8e-20 102.1 83 61.4
Pp3c10_16560 Physcomitrium patens HOM05D005889 ORTHO05D007495 6.2e-20 101.7 86 60.5
Pp3c1_25290 Physcomitrium patens HOM05D005889 ORTHO05D007495 3.1e-19 99.4 85 60.0
Peaxi162Scf00700g00623 Petunia axillaris HOM05D005889 ORTHO05D007495 5.3e-19 98.6 72 69.4
Mapoly0034s0091 Marchantia polymorpha HOM05D005889 ORTHO05D007495 5.8e-18 95.1 83 59.0
ATR0787G083 Amborella trichopoda HOM05D005889 ORTHO05D007495 2.2e-17 93.2 72 63.9
Rhsim10G0027100 Rhododendron simsii HOM05D005889 ORTHO05D007495 5.1e-14 82.0 57 73.7
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 8.1e-12 74.7 83 39.8
CSS0042844 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.1e-11 74.3 59 67.8
SEGI_28638 Sequoiadendron giganteum HOM05D005889 ORTHO05D007495 1.4e-11 73.9 86 48.8
AL6G25690 Arabidopsis lyrata HOM05D005889 ORTHO05D007495 1.8e-11 73.6 56 60.7
RcHm_v2.0_Chr2g0170541 Rosa chinensis HOM05D005889 ORTHO05D007495 6.9e-11 71.6 57 64.9
TPR.G132 Trifolium pratense HOM05D005889 ORTHO05D007495 9.0e-11 71.2 43 86.0
Gohir.A07G218300 Gossypium hirsutum HOM05D005889 ORTHO05D007495 2.0e-10 70.1 55 61.8
TPR.G33054 Trifolium pratense HOM05D005889 ORTHO05D007495 1.7e-09 67.0 43 74.4
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 5.5e-08 62.0 83 36.1
Dinv35030 Davidia involucrata HOM05D005889 ORTHO05D007495 1.6e-07 60.5 121 38.8
HPP92_014818 Vanilla planifolia HOM05D005889 ORTHO05D007495 2.7e-07 59.7 54 53.7
AagrBONN_evm.TU.Sc2ySwM_368.656 Anthoceros agrestis HOM05D005889 ORTHO05D007495 4.6e-07 58.9 52 53.8


User provided reference genes

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