Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 2.8e-247 858.2 443 100.0
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 5.8e-221 770.8 444 91.2
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 2.2e-220 768.8 443 90.7
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 2.4e-219 765.4 442 89.8
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 5.4e-219 764.2 439 89.5
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 3.3e-216 755.0 438 89.3
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 4.3e-216 754.6 439 87.9
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 6.9e-214 747.3 440 88.0
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 2.0e-213 745.7 438 88.6
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 4.8e-207 724.5 442 85.1
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 4.8e-207 724.5 442 85.1
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 1.3e-204 716.5 438 85.6
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 4.6e-202 708.0 439 82.2
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 4.6e-202 708.0 437 82.8
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 1.0e-201 706.8 440 82.0
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.9e-201 704.9 439 82.2
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.5e-200 703.0 442 82.1
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 2.5e-200 702.2 439 82.7
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 2.5e-200 702.2 442 82.1
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 5.6e-200 701.0 439 81.5
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 9.6e-200 700.3 438 82.6
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 9.6e-200 700.3 441 82.1
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 1.3e-199 699.9 439 82.5
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 4.8e-199 698.0 441 81.2
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 6.2e-199 697.6 439 82.0
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 1.1e-198 696.8 441 81.4
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 1.8e-198 696.0 438 82.0
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 1.8e-198 696.0 439 81.8
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 1.8e-198 696.0 438 80.6
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 2.4e-198 695.7 446 81.4
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 2.4e-198 695.7 437 81.0
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 3.1e-198 695.3 439 81.3
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 6.9e-198 694.1 440 81.6
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 6.9e-198 694.1 448 80.4
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 7.6e-197 690.6 439 81.3
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 7.6e-197 690.6 442 80.8
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.3e-196 689.9 438 81.1
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 1.3e-196 689.9 402 86.6
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 3.8e-196 688.3 442 80.1
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 6.4e-196 687.6 444 80.4
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 8.4e-196 687.2 442 79.9
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 1.1e-195 686.8 441 79.6
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 1.1e-195 686.8 441 80.5
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 1.4e-195 686.4 444 80.9
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 1.4e-195 686.4 442 79.9
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 1.4e-195 686.4 440 80.9
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 1.9e-195 686.0 444 80.2
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 5.5e-195 684.5 441 79.8
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 1.2e-194 683.3 444 80.2
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 1.2e-194 683.3 422 83.6
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.6e-194 682.9 437 79.6
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 2.7e-194 682.2 441 80.0
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 3.5e-194 681.8 441 80.7
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 4.6e-194 681.4 440 79.5
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 6.0e-194 681.0 440 79.5
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 6.0e-194 681.0 395 86.8
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 7.9e-194 680.6 439 80.0
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 1.0e-193 680.2 438 79.9
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 5.1e-193 677.9 438 79.9
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 6.7e-193 677.6 443 79.0
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.1e-192 676.8 442 80.3
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 1.5e-192 676.4 437 78.9
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 3.3e-192 675.2 448 78.1
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 3.3e-192 675.2 438 80.6
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 5.6e-192 674.5 440 80.7
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 7.4e-192 674.1 439 80.2
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 9.6e-192 673.7 438 79.7
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 1.6e-191 672.9 384 88.0
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 1.6e-191 672.9 439 80.0
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 2.1e-191 672.5 438 78.8
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 4.8e-191 671.4 435 78.9
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.1e-190 670.2 440 79.3
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 2.4e-190 669.1 440 79.3
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 2.4e-190 669.1 439 80.0
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 9.0e-190 667.2 442 79.4
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 1.5e-189 666.4 440 76.8
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 4.5e-189 664.8 393 84.2
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 1.0e-188 663.7 393 84.0
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 1.0e-188 663.7 442 77.8
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 1.7e-188 662.9 442 76.5
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 2.2e-188 662.5 437 78.9
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 3.2e-187 658.7 439 76.3
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 3.5e-186 655.2 444 77.3
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 4.6e-186 654.8 433 76.9
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 2.3e-185 652.5 445 76.6
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 2.3e-185 652.5 444 76.8
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 2.3e-185 652.5 444 76.8
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 2.3e-185 652.5 438 76.3
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 3.0e-185 652.1 446 76.2
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 5.1e-185 651.4 401 83.0
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 6.7e-185 651.0 437 77.3
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 6.7e-185 651.0 401 81.8
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 8.7e-185 650.6 402 81.3
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 1.1e-184 650.2 422 78.7
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-184 649.8 401 81.3
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 1.5e-184 649.8 401 81.3
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 1.9e-184 649.4 438 76.9
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 1.9e-184 649.4 395 82.5
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 9.7e-184 647.1 384 84.4
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 2.2e-183 646.0 411 79.8
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 1.1e-182 643.7 445 76.4
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 1.8e-182 642.9 439 76.5
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 2.4e-182 642.5 438 75.1
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 3.1e-182 642.1 401 80.5
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 3.1e-182 642.1 401 80.5
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 9.0e-182 640.6 421 78.1
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 2.0e-181 639.4 391 83.9
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 2.6e-181 639.0 442 77.1
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 2.9e-180 635.6 439 74.9
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 3.8e-180 635.2 420 78.8
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 5.0e-180 634.8 439 74.9
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 8.5e-180 634.0 441 75.1
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 8.5e-180 634.0 441 75.1
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 8.5e-180 634.0 385 81.8
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.6e-178 629.8 431 75.2
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 1.1e-174 617.1 480 70.0
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 5.9e-173 611.3 455 70.3
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 3.2e-171 605.5 437 73.7
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 1.8e-166 589.7 441 71.4
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 2.4e-166 589.3 379 80.2
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 2.5e-163 579.3 442 71.3
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 2.0e-160 569.7 359 83.0
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 2.0e-160 569.7 363 81.0
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 3.8e-156 555.4 359 79.7
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 7.2e-155 551.2 372 72.3
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 4.7e-154 548.5 386 70.7
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 4.1e-150 535.4 372 68.8
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 1.6e-149 533.5 307 88.6
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 7.7e-149 531.2 365 70.1
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 3.6e-146 522.3 405 65.7
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 3.6e-146 522.3 375 67.7
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.8e-145 520.0 403 64.3
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 5.7e-144 515.0 424 63.7
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.3e-143 513.8 382 66.2
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 2.2e-143 513.1 378 65.1
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 8.3e-143 511.1 377 67.1
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 4.1e-142 508.8 361 71.5
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 5.4e-142 508.4 443 60.3
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 5.0e-140 501.9 364 68.1
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 1.0e-137 494.2 397 59.7
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 1.6e-133 480.3 317 78.2
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.0e-132 477.6 392 59.7
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 3.6e-130 469.2 359 63.8
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 1.6e-117 427.2 365 60.5
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 1.9e-99 367.1 366 54.6
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 1.7e-95 354.0 302 61.3
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 1.2e-85 321.2 217 73.7
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 5.0e-71 272.7 328 46.0
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 3.5e-69 266.5 204 72.1
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 1.4e-60 238.0 123 91.1
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 2.3e-60 237.3 157 80.3
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.5e-59 234.6 199 60.3
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 1.5e-56 224.6 160 69.4
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 9.1e-41 172.2 162 53.7
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 3.8e-39 166.8 119 71.4
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 6.8e-36 156.0 111 75.7
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 1.2e-32 145.2 81 88.9
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 9.4e-30 135.6 82 84.1
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 1.2e-29 135.2 138 52.9
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 2.6e-27 127.5 80 72.5
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 3.3e-22 110.5 75 68.0
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 5.7e-19 99.8 51 88.2
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 8.6e-15 85.9 94 50.0
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 3.9e-07 60.5 35 80.0


User provided reference genes

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