Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 9.8e-206 719.9 370 100.0
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 8.6e-77 291.6 159 94.3
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 4.7e-75 285.8 159 91.2
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 8.1e-75 285.0 159 90.6
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 4.4e-73 279.3 159 89.3
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.6e-70 270.8 159 87.4
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.2e-67 261.2 154 85.1
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.2e-67 261.2 154 85.1
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 1.6e-67 260.8 159 82.4
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 1.9e-63 247.3 157 79.6
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 2.4e-63 246.9 157 79.6
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 7.1e-63 245.4 157 78.3
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 2.1e-62 243.8 157 79.0
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 4.6e-62 242.7 157 78.3
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 4.6e-62 242.7 157 77.1
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 4.6e-62 242.7 157 77.7
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 7.8e-62 241.9 157 78.3
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.0e-61 241.5 157 79.0
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.0e-61 241.5 157 79.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.3e-61 241.1 157 77.1
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 8.6e-61 238.4 157 76.4
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 5.6e-60 235.7 157 77.1
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 9.6e-60 235.0 157 75.2
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.6e-59 234.2 202 64.4
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 3.6e-59 233.0 160 73.8
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 3.6e-59 233.0 158 73.4
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 5.2e-58 229.2 157 76.4
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.5e-57 227.6 157 73.9
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 2.6e-57 226.9 157 73.9
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 7.6e-57 225.3 202 63.9
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 1.7e-56 224.2 157 72.6
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 2.2e-56 223.8 157 73.2
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 3.8e-56 223.0 157 73.9
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 4.9e-56 222.6 157 72.6
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 4.9e-56 222.6 157 72.0
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 1.1e-55 221.5 157 70.7
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 1.4e-55 221.1 157 73.2
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 1.9e-55 220.7 157 72.6
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 3.2e-55 219.9 157 70.1
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 9.3e-55 218.4 157 69.4
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 9.3e-55 218.4 157 72.6
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 9.3e-55 218.4 157 72.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 1.2e-54 218.0 157 69.4
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.6e-54 217.6 157 68.2
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 2.1e-54 217.2 212 59.9
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 2.1e-54 217.2 155 71.0
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 3.5e-54 216.5 157 67.5
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 4.6e-54 216.1 157 72.0
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.0e-53 214.9 157 71.3
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 1.0e-53 214.9 157 69.4
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.3e-53 214.5 157 66.2
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 1.3e-53 214.5 208 58.7
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.3e-53 214.5 159 67.9
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 2.3e-53 213.8 157 66.9
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 3.9e-53 213.0 155 71.6
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 3.9e-53 213.0 157 65.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 6.6e-53 212.2 144 75.0
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 6.6e-53 212.2 157 70.7
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 3.3e-52 209.9 159 66.0
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 5.6e-52 209.1 157 67.5
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 2.8e-51 206.8 228 53.1
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 8.1e-51 205.3 157 69.4
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 2.4e-50 203.8 153 68.6
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 5.3e-50 202.6 157 66.2
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 9.0e-50 201.8 157 68.2
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.5e-49 201.1 232 52.2
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.4e-49 199.9 157 66.9
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 3.4e-49 199.9 232 51.7
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 3.4e-49 199.9 157 64.3
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 5.8e-49 199.1 232 51.7
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 7.6e-49 198.7 232 51.7
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 9.9e-49 198.4 232 51.7
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 9.9e-49 198.4 232 51.7
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 9.9e-49 198.4 235 51.5
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.7e-48 197.6 157 62.4
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.7e-48 197.6 157 63.7
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 2.9e-48 196.8 157 64.3
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.4e-47 194.5 159 62.3
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.4e-47 194.5 159 62.3
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 2.5e-44 183.7 157 59.2
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 3.3e-44 183.3 270 43.0
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 3.6e-43 179.9 147 60.5
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 2.6e-41 173.7 157 60.5
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 4.9e-40 169.5 150 55.3
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 2.1e-38 164.1 112 72.3
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.3e-37 160.6 153 54.2
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.5e-36 157.9 123 62.6
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.8e-34 151.0 159 50.9
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 2.5e-31 140.6 156 48.7
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.2e-30 138.3 182 46.7
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.1e-30 137.5 141 50.4
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.8e-29 134.4 70 92.9
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 4.3e-28 129.8 226 37.6
Ca_07055_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.4e-26 124.8 69 91.3
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 9.3e-23 112.1 87 64.4
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 7.9e-22 109.0 78 69.2
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 1.9e-20 104.4 80 65.0
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 4.3e-20 103.2 89 60.7
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.1e-18 98.6 93 50.5
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 5.3e-18 96.3 76 63.2
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 5.9e-17 92.8 80 60.0
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 2.5e-15 87.4 77 55.8
Ca_27218_v3 Cicer arietinum L. HOM05D002724 ORTHO05D148160 4.6e-14 83.2 101 52.5
Ca_14560_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000632 4.3e-12 76.6 42 92.9
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 3.7e-11 73.6 157 35.7
CSS0006962 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 8.2e-11 72.4 42 83.3
CSS0032645 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 5.3e-10 69.7 39 84.6
Ca_14896_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000514 5.9e-09 66.2 37 91.9
Ca_03044_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000514 1.7e-08 64.7 37 89.2
Ca_16141_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000632 1.7e-08 64.7 37 89.2
Lsat_1_v5_gn_8_96981 Lactuca sativa HOM05D001957 ORTHO05D004161 2.9e-08 63.9 41 75.6
Ca_14286_v3 Cicer arietinum L. HOM05D000280 ORTHO05D000514 8.5e-08 62.4 40 80.0
Lsat_1_v5_gn_7_94541 Lactuca sativa HOM05D003845 ORTHO05D004161 2.7e-06 57.4 36 75.0
Ca_11215_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.6e-06 57.0 90 43.3


User provided reference genes

Program Settings