Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 4.1e-53 211.1 103 100.0
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 4.1e-53 211.1 103 100.0
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 5.0e-43 177.6 88 93.2
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.5e-42 175.3 88 94.3
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.0e-39 165.6 88 89.8
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 3.4e-39 164.9 87 86.2
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 7.5e-39 163.7 90 86.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 9.8e-39 163.3 88 87.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 9.8e-39 163.3 89 84.3
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 9.8e-39 163.3 89 84.3
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.7e-38 161.4 88 86.4
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.4e-37 159.5 89 84.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.9e-37 159.1 94 78.7
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 2.4e-37 158.7 88 81.8
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 2.4e-37 158.7 88 81.8
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 4.1e-37 157.9 90 82.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.6e-36 156.0 88 81.8
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.5e-36 154.8 88 80.7
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.3e-35 152.9 90 77.8
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 3.0e-35 151.8 87 80.5
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 3.9e-35 151.4 89 79.8
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.9e-35 151.4 88 83.0
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 6.6e-35 150.6 89 79.8
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 1.1e-34 149.8 94 74.5
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.5e-34 149.4 89 79.8
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.5e-34 149.4 88 78.4
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.9e-34 149.1 94 74.5
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.5e-34 148.7 88 78.4
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 3.3e-34 148.3 86 81.4
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 5.6e-34 147.5 94 76.6
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 5.6e-34 147.5 89 77.5
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 5.6e-34 147.5 90 76.7
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 5.6e-34 147.5 88 78.4
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 5.6e-34 147.5 88 78.4
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 5.6e-34 147.5 88 79.5
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 7.3e-34 147.1 88 79.5
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 9.5e-34 146.7 86 80.2
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 9.5e-34 146.7 89 77.5
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.2e-33 146.4 85 80.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.2e-33 146.4 85 78.8
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.6e-33 146.0 89 76.4
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.8e-33 145.2 89 78.7
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 2.8e-33 145.2 86 76.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.6e-33 144.8 88 77.3
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 4.7e-33 144.4 89 75.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 6.2e-33 144.1 88 75.0
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 8.1e-33 143.7 88 75.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-32 143.3 88 75.0
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.1e-32 143.3 88 73.9
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.8e-32 142.5 86 76.7
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.8e-32 142.5 88 73.9
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.1e-32 141.7 96 71.9
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.1e-32 141.7 89 73.0
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 3.1e-32 141.7 88 77.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.1e-32 141.7 89 75.3
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 5.2e-32 141.0 87 77.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 6.8e-32 140.6 88 73.9
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 6.8e-32 140.6 88 76.1
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.2e-31 139.8 85 77.6
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.5e-31 139.4 96 70.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.6e-31 138.7 100 68.0
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 3.4e-31 138.3 88 72.7
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 5.8e-31 137.5 92 70.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 5.8e-31 137.5 92 70.7
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 7.5e-31 137.1 88 73.9
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 9.9e-31 136.7 92 69.6
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 9.9e-31 136.7 90 71.1
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.9e-31 136.7 88 70.5
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-30 136.3 88 76.1
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-30 136.3 88 76.1
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.7e-30 136.0 88 75.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 2.9e-30 135.2 93 69.9
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 3.7e-30 134.8 90 70.0
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 3.7e-30 134.8 89 70.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 4.9e-30 134.4 88 70.5
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.1e-29 133.3 90 68.9
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.1e-29 133.3 79 77.2
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.1e-29 133.3 88 71.6
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.9e-29 132.5 96 67.7
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.9e-29 132.5 86 73.3
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 3.2e-29 131.7 88 68.2
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 5.4e-29 131.0 88 69.3
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 7.1e-29 130.6 88 71.6
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 3.5e-28 128.3 89 65.2
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 7.8e-28 127.1 78 75.6
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 3.9e-27 124.8 91 65.9
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.9e-27 124.8 89 62.9
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 9.5e-26 120.2 89 68.5
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.4e-24 116.3 80 63.8
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.2e-23 113.2 148 45.3
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 2.1e-20 102.4 86 55.8
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.7e-19 99.4 86 53.5
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 1.9e-18 95.9 54 83.3
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 4.3e-18 94.7 86 51.2
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 9.6e-18 93.6 64 70.3
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.5e-15 86.3 54 70.4
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 1.7e-14 82.8 53 73.6
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 4.9e-14 81.3 85 44.7
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.9e-13 79.3 80 42.5
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 3.5e-12 75.1 83 42.2
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 1.3e-11 73.2 55 69.1
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.2e-09 64.3 38 71.1
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 9.9e-07 57.0 33 84.8


User provided reference genes

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