Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 2.6e-119 433.7 686 100.0
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.8e-88 331.3 686 89.9
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.2e-81 307.8 655 93.1
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 9.4e-77 292.4 676 89.8
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 2.5e-69 267.7 637 92.6
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 5.1e-67 260.0 681 86.5
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 7.4e-66 256.1 658 89.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 3.1e-64 250.8 671 88.4
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 5.7e-58 229.9 655 87.0
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.4e-56 225.3 683 84.0
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.6e-55 221.9 664 86.3
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 2.9e-54 217.6 658 86.6
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 2.7e-52 211.1 664 85.4
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 7.5e-50 203.0 664 85.4
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.8e-48 198.4 149 64.4
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 1.8e-48 198.4 146 66.4
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.6e-47 195.3 667 84.3
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 3.5e-47 194.1 647 84.4
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 5.0e-46 190.3 164 61.6
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 8.5e-46 189.5 645 78.6
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 1.1e-45 189.1 667 79.0
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 2.5e-45 188.0 667 80.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 1.6e-44 185.3 647 87.0
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 4.7e-44 183.7 648 86.6
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.0e-44 183.0 125 68.0
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.0e-43 182.6 664 84.0
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.0e-43 182.6 656 84.0
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.0e-43 182.6 656 84.0
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 1.8e-43 181.8 148 59.5
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 1.8e-43 181.8 148 59.5
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 2.3e-43 181.4 149 59.7
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 3.0e-43 181.0 134 61.9
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 3.0e-43 181.0 134 61.9
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 3.0e-43 181.0 662 72.7
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 4.0e-43 180.6 134 61.9
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 5.2e-43 180.3 663 85.5
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.5e-42 178.7 675 75.7
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 2.0e-42 178.3 141 58.9
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 2.6e-42 177.9 656 85.5
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.4e-42 177.6 125 66.4
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 5.7e-42 176.8 141 58.9
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 9.8e-42 176.0 147 59.2
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 9.8e-42 176.0 674 74.2
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.3e-41 175.6 658 81.8
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 4.8e-41 173.7 148 60.1
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 8.3e-41 172.9 668 83.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 8.3e-41 172.9 156 55.1
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.1e-40 172.6 131 61.1
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.4e-40 171.4 135 59.3
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 4.1e-40 170.6 151 56.3
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 1.2e-39 169.1 133 59.4
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 2.7e-39 167.9 649 84.4
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 3.5e-39 167.5 674 76.7
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 3.5e-39 167.5 149 57.0
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 4.5e-39 167.2 676 77.2
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 5.9e-39 166.8 676 77.1
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.0e-38 166.0 665 74.9
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 3.8e-38 164.1 142 56.3
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.8e-38 164.1 650 71.4
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 5.0e-38 163.7 152 57.2
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 8.6e-38 162.9 671 80.6
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.1e-37 162.5 151 53.6
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.1e-37 162.5 123 61.0
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.1e-37 162.5 135 57.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 1.5e-37 162.2 147 57.1
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 1.5e-37 162.2 671 80.8
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 2.5e-37 161.4 123 61.8
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.3e-37 161.0 671 80.5
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 4.2e-37 160.6 673 63.3
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 7.2e-37 159.8 153 52.9
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 7.2e-37 159.8 116 66.4
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 4.7e-36 157.1 128 60.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.1e-36 156.8 125 58.4
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 1.4e-35 155.6 147 57.1
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.4e-35 155.6 669 80.3
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 2.3e-35 154.8 136 60.3
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 8.9e-35 152.9 150 50.0
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.5e-34 152.1 119 61.3
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.3e-33 149.1 148 53.4
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.4e-32 144.8 153 49.0
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 4.1e-32 144.1 668 81.3
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 5.4e-32 143.7 94 72.3
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 9.2e-32 142.9 137 54.7
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 5.9e-31 140.2 669 76.2
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.3e-30 139.0 110 61.8
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 2.9e-30 137.9 107 62.6
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 2.5e-29 134.8 154 48.1
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.6e-28 132.1 111 58.6
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.7e-28 130.6 91 70.3
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.0e-27 129.4 79 75.9
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 1.8e-27 128.6 155 45.2
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.6e-26 124.8 110 56.4
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 5.8e-26 123.6 90 67.8
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 2.2e-25 121.7 108 53.7
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.9e-25 121.3 79 70.9
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 1.1e-24 119.4 89 67.4
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.2e-23 115.9 136 48.5
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 2.7e-23 114.8 77 72.7
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.7e-22 112.1 132 44.7
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 8.6e-22 109.8 128 50.8
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.9e-21 108.6 128 50.0
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 4.0e-19 100.9 65 70.8
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.8e-19 100.1 78 65.4
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 4.4e-18 97.4 137 43.1
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 4.1e-16 90.9 65 69.2
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 6.6e-14 83.6 89 53.9
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 6.6e-14 83.6 89 53.9
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.6e-14 83.2 61 67.2
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.6e-12 79.0 145 31.7
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.6e-12 79.0 145 31.7
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.4e-11 75.9 104 36.5
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.8e-11 75.5 103 37.9
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.1e-11 74.7 50 74.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 1.5e-10 72.4 69 59.4


User provided reference genes

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