Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04031_v3 Cicer arietinum L. HOM05D002756 ORTHO05D002896 0.0e+00 1335.9 772 100.0
TPR.G12184 Trifolium pratense HOM05D002756 ORTHO05D002896 3.8e-220 768.8 816 66.9
Medtr7g007880 Medicago truncatula HOM05D002756 ORTHO05D002896 5.2e-209 731.9 825 63.2
Glyma.18G253700 Glycine max HOM05D002756 ORTHO05D002896 8.6e-180 634.8 783 60.9
Phvul.008G045300 Phaseolus vulgaris HOM05D002756 ORTHO05D002896 5.1e-164 582.4 808 56.9
Glyma.09G241900 Glycine max HOM05D002756 ORTHO05D002896 1.5e-163 580.9 793 59.0
VMungo1383G3385 Vigna mungo HOM05D002756 ORTHO05D002896 7.6e-160 568.5 788 56.2
Lj1g0002162 Lotus japonicus HOM05D002756 ORTHO05D002896 1.1e-153 548.1 936 49.6
Psat3g195680 Pisum sativum HOM05D002756 ORTHO05D002896 4.2e-150 536.2 686 61.2
arahy.Tifrunner.gnm1.ann1.IYGI6Y Arachis hypogaea HOM05D002756 ORTHO05D002896 9.7e-139 498.4 814 52.0
arahy.Tifrunner.gnm1.ann1.QKY2Z8 Arachis hypogaea HOM05D002756 ORTHO05D002896 1.6e-138 497.7 814 52.0
Lalb_Chr01g0021551 Lupinus albus HOM05D002756 ORTHO05D002896 1.0e-132 478.4 933 46.2
Lalb_Chr03g0040271 Lupinus albus HOM05D002756 ORTHO05D002896 3.5e-112 410.2 831 41.0
Cfa011088 Carpinus fangiana HOM05D002756 ORTHO05D002896 3.4e-35 154.5 373 38.1
Haze_02809 Corylus avellana HOM05D002756 ORTHO05D002896 8.4e-34 149.8 415 35.4
Prupe.2G127500 Prunus persica HOM05D002756 ORTHO05D002896 9.7e-30 136.3 354 37.3
FAN03G0252 Fragaria x ananassa HOM05D002756 ORTHO05D002896 1.2e-27 129.4 341 37.0
FAN06G1585 Fragaria x ananassa HOM05D002756 ORTHO05D002896 1.1e-25 122.9 344 35.5
FAN01G1526 Fragaria x ananassa HOM05D002756 ORTHO05D002896 1.9e-25 122.1 334 36.5
FAN06G0867 Fragaria x ananassa HOM05D002756 ORTHO05D008812 1.9e-25 122.1 343 35.3
FvH4_7g09850 Fragaria vesca HOM05D002756 ORTHO05D002896 2.5e-25 121.7 344 35.5
FAN10G1547 Fragaria x ananassa HOM05D002756 ORTHO05D008812 3.2e-25 121.3 343 35.9
Potri.002G136600 Populus trichocarpa HOM05D002756 ORTHO05D002896 4.2e-25 120.9 385 33.2
Manes.01G272300 Manihot esculenta HOM05D002756 ORTHO05D002896 1.6e-24 119.0 322 36.3
FAN10G3136 Fragaria x ananassa HOM05D002756 ORTHO05D008812 2.7e-24 118.2 344 35.8
MD07G1103700 Malus domestica HOM05D002756 ORTHO05D002896 4.3e-22 110.9 362 35.4
CiPaw.13G027800 Carya illinoinensis HOM05D002756 ORTHO05D002896 5.7e-22 110.5 211 41.7
QL04p030920 Quercus lobata HOM05D002756 ORTHO05D002896 9.7e-22 109.8 391 32.0
Potri.014G045300 Populus trichocarpa HOM05D002756 ORTHO05D002896 1.4e-20 105.9 319 34.8
Thecc.01G392600 Theobroma cacao HOM05D002756 ORTHO05D002896 1.4e-20 105.9 328 35.4
Sabra14G0033200 Salix brachista HOM05D002756 ORTHO05D002896 3.4e-19 101.3 734 26.0
Atru.chr5.159 Acer truncatum HOM05D002756 ORTHO05D002896 7.7e-19 100.1 415 32.8
TPR.G12302 Trifolium pratense HOM05D002756 ORTHO05D002896 1.3e-18 99.4 88 65.9
Duzib138G1759 Durio zibethinus HOM05D002756 ORTHO05D002896 1.2e-16 92.8 343 32.9
RcHm_v2.0_Chr1g0347391 Rosa chinensis HOM05D002756 ORTHO05D002896 2.1e-16 92.0 183 38.3
Sabra02G0105900 Salix brachista HOM05D002756 ORTHO05D002896 6.7e-15 87.0 456 28.5
Ciclev10024461m.g Citrus clementina HOM05D001866 ORTHO05D001915 2.6e-14 85.1 324 31.2
TAR375G0301 Trochodendron aralioides HOM05D002756 ORTHO05D002896 7.4e-14 83.6 340 31.2
Dinv44072 Davidia involucrata HOM05D001866 ORTHO05D002896 1.3e-13 82.8 179 34.1
ClCG06G002590 Citrullus lanatus HOM05D002756 ORTHO05D002896 3.7e-13 81.3 318 34.3
CANSAT78G0750 Cannabis sativa HOM05D002756 ORTHO05D002896 6.3e-13 80.5 483 29.8
MD02G1216600 Malus domestica HOM05D002756 ORTHO05D002896 8.2e-13 80.1 427 27.4
Gohir.D11G080700 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.2e-11 76.3 326 32.2
TAR629G0742 Trochodendron aralioides HOM05D002756 ORTHO05D002896 1.2e-11 76.3 334 32.3
Manes.05G053100 Manihot esculenta HOM05D002756 ORTHO05D002896 1.5e-11 75.9 176 37.5
Cc02_g24920 Coffea canephora HOM05D002756 ORTHO05D002896 3.4e-11 74.7 324 29.6
Gorai.007G086500 Gossypium raimondii HOM05D002756 ORTHO05D002896 3.4e-11 74.7 326 32.5
Cpa.g.sc101.27 Carica papaya HOM05D002756 ORTHO05D002896 7.7e-11 73.6 711 24.3
Gohir.A11G076200 Gossypium hirsutum HOM05D002756 ORTHO05D002896 7.7e-11 73.6 323 34.1
Gorai.N024700 Gossypium raimondii HOM05D002756 ORTHO05D002896 1.7e-10 72.4 178 35.4
TAR629G2869 Trochodendron aralioides HOM05D002756 ORTHO05D002896 2.9e-10 71.6 334 31.4
Gohir.D11G080900 Gossypium hirsutum HOM05D002756 ORTHO05D002896 5.0e-10 70.9 326 31.6
CsaV3_6G008540 Cucumis sativus L. HOM05D002756 ORTHO05D002896 3.2e-09 68.2 327 31.5
Gohir.A11G076400 Gossypium hirsutum HOM05D002756 ORTHO05D002896 3.2e-09 68.2 324 29.9
PSO063G5636 Papaver somniferum HOM05D002756 ORTHO05D002896 7.2e-09 67.0 220 31.4
PSO782G0082 Papaver somniferum HOM05D002756 ORTHO05D002896 1.2e-08 66.2 204 31.4
TWI59G1099 Tripterygium wilfordii HOM05D002756 ORTHO05D002896 2.7e-08 65.1 176 33.5
CAN.G362.10 Capsicum annuum HOM05D002756 ORTHO05D002896 7.9e-08 63.5 184 31.5
MELO3C022268.2 Cucumis melo HOM05D002756 ORTHO05D002896 3.9e-07 61.2 322 29.5
GSVIVG01018249001 Vitis vinifera HOM05D001866 ORTHO05D001915 3.9e-07 61.2 292 30.1
Eucgr.E01574 Eucalyptus grandis HOM05D002756 ORTHO05D002896 5.2e-07 60.8 156 34.0
CSS0007822 Camellia sinensis var. sinensis HOM05D002756 ORTHO05D002896 6.7e-07 60.5 327 31.2
CiPaw.12G049400 Carya illinoinensis HOM05D002756 ORTHO05D002896 1.1e-06 59.7 229 29.7
Peaxi162Scf00030g00052 Petunia axillaris HOM05D002756 ORTHO05D002896 2.0e-06 58.9 203 35.0
Nn6g33844 Nelumbo nucifera HOM05D002756 ORTHO05D002896 3.3e-06 58.2 339 28.9
Actinidia12652 Actinidia chinensis HOM05D002756 ORTHO05D002896 4.4e-06 57.8 203 28.6
COL.COLO4_12427 Corchorus olitorius HOM05D002756 ORTHO05D002896 9.7e-06 56.6 230 31.3


User provided reference genes

Program Settings