Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 1.4e-90 336.3 170 100.0
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 8.5e-64 247.3 169 73.4
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 7.2e-63 244.2 171 74.9
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 4.4e-60 235.0 172 72.7
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 3.6e-54 215.3 171 67.8
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 1.4e-50 203.4 171 63.7
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 1.7e-48 196.4 170 62.4
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 1.1e-47 193.7 171 60.8
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 2.8e-46 189.1 172 61.6
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 1.1e-39 167.2 172 59.3
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 3.6e-38 162.2 172 58.7
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 6.8e-37 157.9 159 52.8
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 4.4e-36 155.2 158 55.1
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 4.9e-35 151.8 157 49.7
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 2.4e-34 149.4 166 48.2
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 7.1e-34 147.9 159 52.2
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 2.1e-33 146.4 165 49.1
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 6.0e-33 144.8 163 50.3
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 1.0e-32 144.1 158 51.9
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.3e-32 143.7 163 47.9
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 1.3e-32 143.7 163 48.5
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.7e-32 143.3 165 50.3
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 5.1e-32 141.7 164 46.3
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 8.6e-32 141.0 161 47.2
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 1.5e-31 140.2 165 49.7
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 1.9e-31 139.8 153 49.0
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 2.5e-31 139.4 155 48.4
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 3.3e-31 139.0 154 48.7
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 4.3e-31 138.7 153 48.4
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 7.3e-31 137.9 159 46.5
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 1.2e-30 137.1 164 47.0
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 1.2e-30 137.1 152 50.7
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 1.6e-30 136.7 158 45.6
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 3.6e-30 135.6 153 48.4
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 6.2e-30 134.8 157 46.5
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 1.4e-29 133.7 160 48.8
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 3.1e-29 132.5 161 46.6
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 6.8e-29 131.3 153 49.0
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 6.8e-29 131.3 161 45.3
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 2.6e-28 129.4 163 44.8
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 3.4e-28 129.0 152 48.0
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 3.4e-28 129.0 159 45.3
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 4.4e-28 128.6 163 46.0
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 5.8e-28 128.3 150 46.7
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 7.6e-28 127.9 159 49.1
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.3e-27 127.1 149 45.6
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 2.2e-27 126.3 153 45.8
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 2.9e-27 125.9 153 46.4
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 3.8e-27 125.6 152 42.8
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 3.8e-27 125.6 152 42.8
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 3.8e-27 125.6 152 42.8
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 4.9e-27 125.2 152 42.8
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 4.9e-27 125.2 152 42.8
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 6.4e-27 124.8 157 43.9
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 8.4e-27 124.4 158 44.9
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.9e-26 123.2 151 45.0
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 2.4e-26 122.9 150 46.7
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 2.4e-26 122.9 147 46.9
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 2.4e-26 122.9 157 44.6
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 5.4e-26 121.7 156 42.9
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 5.4e-26 121.7 153 45.1
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 7.1e-26 121.3 154 45.5
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 7.1e-26 121.3 159 43.4
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 7.1e-26 121.3 149 45.6
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 1.6e-25 120.2 153 39.9
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 1.6e-25 120.2 151 41.7
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 2.1e-25 119.8 149 45.6
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.7e-25 119.4 153 47.1
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 3.5e-25 119.0 153 42.5
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 3.0e-24 115.9 152 40.8
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 5.1e-24 115.2 153 42.5
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 6.6e-24 114.8 125 50.4
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 8.6e-24 114.4 150 41.3
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 1.9e-23 113.2 151 42.4
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 1.9e-23 113.2 151 42.4
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 2.5e-23 112.8 154 42.9
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 4.3e-23 112.1 153 43.1
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 9.6e-23 110.9 150 40.0
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 9.6e-23 110.9 151 41.7
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 9.6e-23 110.9 152 42.1
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 1.2e-22 110.5 152 41.4
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 1.2e-22 110.5 138 44.2
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 1.6e-22 110.2 151 41.7
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 1.6e-22 110.2 152 38.8
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 4.7e-22 108.6 154 40.9
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.8e-21 106.7 153 39.2
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.4e-21 106.3 158 41.8
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.1e-21 105.9 142 46.5
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.1e-21 105.9 142 46.5
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 1.5e-20 103.6 161 40.4
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 2.0e-20 103.2 151 41.7
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 2.6e-20 102.8 150 42.0
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 1.3e-19 100.5 155 38.7
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 2.9e-19 99.4 157 37.6
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 4.9e-19 98.6 147 42.9
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 9.3e-18 94.4 142 37.3
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 1.2e-17 94.0 161 38.5
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 1.3e-16 90.5 147 39.5
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 6.6e-16 88.2 150 41.3
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 1.1e-15 87.4 81 50.6
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 1.1e-15 87.4 149 34.2
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 9.6e-15 84.3 147 38.1
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.6e-14 83.6 147 38.1
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.8e-14 82.8 121 41.3
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 6.2e-14 81.6 135 37.8
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 8.1e-14 81.3 152 38.8
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 9.9e-12 74.3 102 45.1
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 9.9e-12 74.3 138 34.1
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 7.1e-10 68.2 139 33.8
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 2.7e-09 66.2 108 30.6
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 1.5e-07 60.5 133 33.1
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 9.6e-07 57.8 185 28.1
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.3e-06 57.4 53 56.6


User provided reference genes

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