Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03912_v3 Cicer arietinum L. HOM05D000802 ORTHO05D018995 2.6e-181 638.6 334 100.0
Ca_01860_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 1.9e-152 542.7 321 89.7
Ca_15308_v3 Cicer arietinum L. HOM05D000802 ORTHO05D001074 2.3e-84 316.6 328 58.2
Medtr2g030630 Medicago truncatula HOM05D000802 ORTHO05D001074 3.8e-84 315.8 391 52.4
Psat5g002920 Pisum sativum HOM05D000802 ORTHO05D001074 3.0e-76 289.7 317 57.1
TPR.G29437 Trifolium pratense HOM05D000226 ORTHO05D018995 4.4e-64 249.2 464 40.9
Psat1g166440 Pisum sativum HOM05D000802 ORTHO05D001074 2.7e-53 213.4 469 37.5
Psat5g002960 Pisum sativum HOM05D000802 ORTHO05D001074 7.3e-51 205.3 346 45.4
arahy.Tifrunner.gnm1.ann1.RR6KZ0 Arachis hypogaea HOM05D000802 ORTHO05D001074 1.5e-48 197.6 323 43.0
arahy.Tifrunner.gnm1.ann1.C252F7 Arachis hypogaea HOM05D000802 ORTHO05D001074 2.0e-48 197.2 323 42.7
Lalb_Chr01g0001691 Lupinus albus HOM05D000802 ORTHO05D001074 4.6e-29 132.9 321 36.8
Lalb_Chr19g0139221 Lupinus albus HOM05D000802 ORTHO05D001074 3.3e-27 126.7 321 36.1
TPR.G38520 Trifolium pratense HOM05D000802 ORTHO05D001074 1.8e-25 120.9 128 60.9
Phvul.011G033400 Phaseolus vulgaris HOM05D000802 ORTHO05D001074 1.5e-24 117.9 397 30.0
Glyma.12G030400 Glycine max HOM05D000802 ORTHO05D001074 1.8e-20 104.4 331 30.8
Lj3g0027098 Lotus japonicus HOM05D000802 ORTHO05D001074 2.8e-18 97.1 224 33.9
Glyma.11G105500 Glycine max HOM05D000802 ORTHO05D001074 5.7e-11 72.8 251 29.5
QL11p048558 Quercus lobata HOM05D000802 ORTHO05D001074 1.5e-08 64.7 306 28.8
VMungo1127G0888 Vigna mungo HOM05D000802 ORTHO05D001074 2.6e-08 63.9 337 26.1
QL11p049138 Quercus lobata HOM05D000802 ORTHO05D001074 3.4e-08 63.5 304 28.3
ClCG02G004240 Citrullus lanatus HOM05D000802 ORTHO05D001074 7.7e-08 62.4 199 30.7
Actinidia23685 Actinidia chinensis HOM05D000802 ORTHO05D001074 1.1e-06 58.5 310 25.8
CiPaw.06G124200 Carya illinoinensis HOM05D000802 ORTHO05D001074 1.1e-06 58.5 219 31.5
COL.COLO4_17293 Corchorus olitorius HOM05D000802 ORTHO05D001074 1.1e-06 58.5 45 62.2
Atru.chr5.3268 Acer truncatum HOM05D000802 ORTHO05D001074 1.4e-06 58.2 66 47.0
MELO3C013370.2 Cucumis melo HOM05D000802 ORTHO05D001074 1.4e-06 58.2 180 32.2
Sabra04G0114000 Salix brachista HOM05D000802 ORTHO05D001074 1.4e-06 58.2 286 30.1
Cfa005211 Carpinus fangiana HOM05D000802 ORTHO05D001074 1.9e-06 57.8 332 25.9
Prupe.8G162300 Prunus persica HOM05D000802 ORTHO05D001074 3.2e-06 57.0 45 60.0
Ciclev10030161m.g Citrus clementina HOM05D000802 ORTHO05D001074 4.2e-06 56.6 65 46.2
Aa31LG2G15650 Aethionema arabicum HOM05D000802 ORTHO05D001074 9.4e-06 55.5 285 24.9
PGSC0003DMG400001593 Solanum tuberosum HOM05D000802 ORTHO05D001074 9.4e-06 55.5 210 27.6
GSVIVG01024062001 Vitis vinifera HOM05D000802 ORTHO05D001074 9.4e-06 55.5 105 39.0


User provided reference genes

Program Settings