Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 3.2e-152 541.6 250 100.0
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.3e-126 455.7 245 84.5
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 3.7e-124 448.4 269 77.7
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 7.8e-114 414.1 248 75.8
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 7.3e-112 407.5 267 71.9
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 5.0e-105 384.8 249 72.7
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.5e-104 382.5 233 75.1
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.1e-103 379.4 244 71.3
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 6.2e-103 377.9 247 71.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 9.8e-101 370.5 245 70.2
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 4.6e-90 335.1 248 65.3
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.0e-89 332.4 249 66.7
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.1e-88 330.5 246 64.6
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.9e-88 329.7 247 66.4
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 2.5e-88 329.3 244 64.3
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.3e-88 328.6 238 66.8
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 2.1e-87 326.2 244 63.1
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 6.9e-86 321.2 248 64.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 3.4e-85 318.9 248 62.5
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 5.8e-85 318.2 245 61.6
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.7e-84 316.6 254 62.2
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.7e-84 316.6 245 63.3
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.8e-84 315.5 241 62.7
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.1e-83 313.9 268 58.6
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.1e-83 313.9 241 61.0
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 2.4e-83 312.8 243 60.5
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 5.4e-83 311.6 244 62.7
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 9.3e-83 310.8 250 60.0
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.6e-82 310.1 253 59.7
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 2.7e-82 309.3 245 64.1
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 3.5e-82 308.9 246 63.8
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.7e-81 306.6 210 67.1
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.3e-81 306.2 245 62.9
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.3e-81 306.2 245 62.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 2.3e-81 306.2 245 60.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 5.1e-81 305.1 241 58.1
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 8.7e-81 304.3 249 60.2
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 8.7e-81 304.3 249 60.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.1e-80 303.9 251 60.6
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.5e-80 303.5 247 59.9
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.5e-80 303.5 197 68.5
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.9e-80 303.1 238 59.7
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 2.5e-80 302.8 248 58.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 5.6e-80 301.6 198 68.7
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 5.6e-80 301.6 248 59.7
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 9.6e-80 300.8 242 57.0
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 9.6e-80 300.8 245 62.4
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.6e-79 300.1 238 58.8
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 6.2e-79 298.1 204 69.1
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 6.2e-79 298.1 250 58.4
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 6.2e-79 298.1 244 58.6
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 6.2e-79 298.1 250 58.8
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.1e-78 297.4 249 57.4
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 4.0e-78 295.4 251 57.4
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 4.0e-78 295.4 253 58.1
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 6.9e-78 294.7 262 56.1
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 6.9e-78 294.7 245 59.6
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 2.6e-77 292.7 261 56.3
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 3.4e-77 292.4 262 56.5
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.4e-77 292.4 196 68.9
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 3.4e-77 292.4 224 62.5
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 3.4e-77 292.4 264 56.8
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 4.5e-77 292.0 245 56.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 5.8e-77 291.6 270 53.0
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 7.6e-77 291.2 198 65.7
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 1.3e-76 290.4 249 59.0
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.9e-76 289.3 235 60.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 2.9e-76 289.3 248 58.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.1e-75 287.3 248 56.9
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.4e-75 287.0 206 63.6
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 2.4e-75 286.2 248 58.5
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 7.9e-74 281.2 238 57.6
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 7.9e-74 281.2 238 57.6
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 7.9e-74 281.2 247 55.9
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.0e-73 279.3 247 53.8
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 3.0e-73 279.3 232 57.3
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 3.0e-73 279.3 253 54.5
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 6.7e-73 278.1 220 60.5
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 3.3e-72 275.8 237 55.7
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 7.4e-72 274.6 236 55.5
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.6e-71 273.5 237 54.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.8e-71 272.7 179 72.1
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.8e-71 272.7 179 72.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.8e-71 272.7 179 72.1
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 8.1e-71 271.2 179 70.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 4.0e-70 268.9 204 63.2
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 5.3e-70 268.5 237 54.9
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.9e-70 268.1 238 55.9
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 6.9e-70 268.1 238 55.9
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 2.0e-69 266.5 268 50.0
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.6e-69 266.2 235 54.9
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.2e-68 263.1 178 68.0
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 2.2e-68 263.1 178 68.0
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.2e-68 263.1 233 56.2
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 4.9e-68 261.9 235 56.2
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.9e-67 260.0 201 63.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 3.2e-67 259.2 172 69.2
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 4.6e-66 255.4 205 61.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 1.8e-65 253.4 232 53.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.9e-65 252.3 208 57.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.9e-65 252.3 208 57.7
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.9e-64 250.0 235 52.8
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.1e-63 246.5 232 53.9
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.4e-62 243.8 226 54.4
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-60 237.3 226 53.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 1.6e-58 230.3 174 61.5
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 8.7e-57 224.6 140 70.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.9e-56 223.4 161 61.5
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.1e-54 217.6 160 61.9
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.6e-53 213.0 166 61.4
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.4e-53 212.6 124 75.0
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 6.7e-49 198.4 143 62.9
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 4.3e-48 195.7 235 46.8
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 3.1e-38 162.9 121 59.5
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 3.8e-36 156.0 120 56.7
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.7e-34 149.8 120 55.0
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 5.2e-33 145.6 82 69.5
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.5e-27 127.5 78 62.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.5e-27 126.7 82 68.3
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.1e-14 83.2 183 34.4
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 2.8e-07 60.1 84 44.0


User provided reference genes

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