Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 3.0e-93 345.1 169 100.0
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 4.5e-49 198.4 159 68.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.9e-49 198.0 144 72.9
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 7.7e-49 197.6 158 69.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 8.0e-38 161.0 123 70.7
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.0e-37 160.6 85 91.8
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 3.0e-37 159.1 124 69.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.1e-30 136.3 139 57.6
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.6e-30 135.6 90 78.9
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.5e-28 130.2 95 71.6
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 3.4e-28 129.0 69 84.1
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-25 119.8 59 94.9
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-25 119.8 59 94.9
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-25 119.8 59 94.9
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-25 119.8 59 94.9
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 4.6e-25 118.6 59 94.9
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.3e-24 117.1 59 93.2
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 3.0e-24 115.9 59 93.2
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 3.0e-24 115.9 59 93.2
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 3.0e-24 115.9 59 93.2
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 3.0e-24 115.9 59 93.2
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 5.0e-24 115.2 59 93.2
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.6e-24 114.4 59 91.5
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 1.9e-23 113.2 59 93.2
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 3.3e-23 112.5 59 88.1
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 3.3e-23 112.5 59 89.8
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 4.3e-23 112.1 59 89.8
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.8e-22 109.4 60 88.3
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.0e-22 107.8 77 72.7
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 1.1e-21 107.5 59 88.1
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-21 106.7 59 88.1
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 3.1e-21 105.9 59 86.4
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 6.8e-21 104.8 125 51.2
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 8.9e-21 104.4 59 84.7
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.8e-20 101.7 59 81.4
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 2.2e-19 99.8 59 79.7
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.2e-19 99.8 59 83.1
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.9e-19 99.4 62 79.0
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 6.4e-19 98.2 47 93.6
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.3e-16 90.5 43 95.3
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.3e-16 89.7 57 75.4
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.6e-16 87.8 130 44.6
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 2.5e-15 86.3 41 92.7
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 3.6e-14 82.4 38 94.7
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 3.6e-14 82.4 38 94.7
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 3.4e-12 75.9 44 79.5
arahy.Tifrunner.gnm1.ann1.HASF1T Arachis hypogaea HOM05D001966 ORTHO05D007227 9.9e-12 74.3 48 75.0
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 9.9e-12 74.3 46 69.6
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 9.9e-12 74.3 46 69.6
arahy.Tifrunner.gnm1.ann1.MZV923 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.7e-11 73.6 42 85.7
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.4e-10 70.5 74 52.7
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 7.1e-10 68.2 53 62.3
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 7.1e-10 68.2 48 68.8
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 7.1e-10 68.2 31 93.5
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 1.2e-09 67.4 39 79.5
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 1.6e-09 67.0 32 93.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 2.1e-09 66.6 46 76.1
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 2.1e-09 66.6 88 46.6
arahy.Tifrunner.gnm1.ann1.DHX5K3 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.7e-09 66.2 45 77.8
Lsat_1_v5_gn_8_139821 Lactuca sativa HOM05D000043 ORTHO05D000223 3.5e-09 65.9 34 88.2
arahy.Tifrunner.gnm1.ann1.Z8IK0I Arachis hypogaea HOM05D001966 ORTHO05D007227 7.8e-09 64.7 45 75.6
Psat3g146720 Pisum sativum HOM05D001966 ORTHO05D010610 1.3e-08 63.9 34 82.4
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.3e-08 63.9 32 87.5
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.3e-08 63.9 32 90.6
arahy.Tifrunner.gnm1.ann1.UQV5ZS Arachis hypogaea HOM05D001966 ORTHO05D007227 2.3e-08 63.2 44 75.0
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 5.1e-08 62.0 33 84.8
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 6.6e-08 61.6 48 66.7
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 8.6e-08 61.2 35 77.1
Cpa.g.sc61.38 Carica papaya HOM05D001966 ORTHO05D007227 3.3e-07 59.3 34 76.5
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 5.6e-07 58.5 49 63.3
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 9.5e-07 57.8 41 70.7
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 9.5e-07 57.8 41 70.7
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 9.5e-07 57.8 41 70.7
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-06 57.4 41 63.4
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 3.6e-06 55.8 34 76.5
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 3.6e-06 55.8 97 44.3
EL10Ac9g22546 Beta vulgaris HOM05D001966 ORTHO05D010610 4.7e-06 55.5 34 76.5
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 4.7e-06 55.5 25 96.0
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 4.7e-06 55.5 38 65.8
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 4.7e-06 55.5 25 96.0
MELO3C001335.2 Cucumis melo HOM05D001966 ORTHO05D010610 8.1e-06 54.7 36 75.0
MELO3C028542.2 Cucumis melo HOM05D001966 ORTHO05D010610 8.1e-06 54.7 36 75.0


User provided reference genes

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