Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.1e-113 413.3 212 100.0
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.1e-113 413.3 212 100.0
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 2.5e-89 332.4 192 87.5
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 9.0e-87 323.9 194 85.6
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.9e-85 318.9 192 81.8
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.5e-78 296.6 192 77.6
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 7.4e-73 277.7 192 74.5
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.6e-72 276.6 192 74.0
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 4.5e-62 241.9 191 66.5
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 4.2e-60 235.3 191 66.0
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 5.0e-53 211.8 193 59.1
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 1.4e-50 203.8 198 57.1
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 2.2e-48 196.4 198 56.6
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 6.3e-48 194.9 194 53.6
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.1e-47 194.1 195 55.4
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.4e-47 193.0 197 54.3
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 4.1e-47 192.2 201 51.7
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 5.3e-47 191.8 198 54.5
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 5.9e-46 188.3 198 53.5
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 7.7e-46 188.0 192 54.2
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.3e-45 187.2 197 50.3
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.7e-45 186.8 189 55.6
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 5.0e-45 185.3 188 54.8
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.1e-44 184.1 196 48.5
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-44 184.1 196 49.0
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 1.9e-44 183.3 193 52.3
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.9e-44 183.3 196 50.0
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 3.2e-44 182.6 197 49.7
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 7.2e-44 181.4 198 51.0
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 1.6e-43 180.3 189 52.4
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.6e-43 180.3 200 49.5
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.6e-43 179.1 198 46.0
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 4.7e-43 178.7 129 69.8
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.4e-42 177.2 189 50.3
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 3.9e-42 175.6 204 47.1
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.9e-42 175.6 227 44.1
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.1e-41 174.1 219 45.2
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.5e-41 173.7 189 52.4
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.3e-41 172.6 218 45.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.3e-40 170.6 189 50.3
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 8.2e-40 167.9 199 49.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.1e-39 167.5 195 47.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 2.4e-39 166.4 198 48.0
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 2.4e-39 166.4 188 50.0
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 4.1e-39 165.6 189 47.6
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.6e-38 163.7 189 48.7
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 1.6e-38 163.7 189 48.1
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 2.6e-38 162.9 189 46.6
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.5e-38 162.5 189 48.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.5e-38 162.5 191 48.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 5.9e-38 161.8 209 44.0
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.0e-37 161.0 189 46.6
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.3e-37 160.6 189 46.6
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.2e-37 159.8 210 42.9
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.2e-37 159.8 191 47.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 3.8e-37 159.1 189 46.6
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.8e-37 159.1 190 48.9
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 6.5e-37 158.3 200 44.5
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 8.5e-37 157.9 205 46.8
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.1e-36 157.5 192 47.9
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 1.5e-36 157.1 189 48.1
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.5e-36 157.1 222 44.6
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.5e-36 156.4 198 42.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 2.5e-36 156.4 189 46.6
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 3.2e-36 156.0 210 46.2
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 9.4e-36 154.5 210 42.9
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.2e-35 154.1 190 46.3
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 1.2e-35 154.1 189 46.6
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.6e-35 153.7 113 65.5
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.6e-35 152.5 189 46.0
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 8.8e-34 147.9 188 47.3
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 8.8e-34 147.9 191 45.5
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 5.7e-33 145.2 244 37.7
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.8e-32 142.9 188 44.1
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 8.2e-32 141.4 208 42.8
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 2.2e-29 133.3 100 61.0
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 1.5e-28 130.6 202 39.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 8.0e-27 124.8 166 39.8
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 6.8e-26 121.7 189 39.7
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 5.4e-23 112.1 197 34.5
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 4.5e-22 109.0 196 36.2
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 4.5e-22 109.0 191 35.6
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.2e-20 102.4 138 44.9
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.4e-20 101.3 92 60.9
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.7e-19 99.8 136 44.1
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 3.6e-19 99.4 133 44.4
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 6.1e-19 98.6 239 30.5
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 5.2e-18 95.5 129 44.2
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.4e-15 85.5 137 36.5
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 9.2e-15 84.7 60 73.3
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 3.4e-09 66.2 148 33.8
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 9.8e-09 64.7 149 32.9


User provided reference genes

Program Settings