Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.1e-122 443.4 220 100.0
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 5.1e-101 371.3 202 90.6
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 2.2e-96 355.9 202 87.1
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.3e-93 346.7 201 85.6
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 6.9e-90 334.3 199 83.9
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 9.9e-89 330.5 199 82.4
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.7e-88 329.7 201 81.6
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 2.4e-87 325.9 199 80.4
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 3.4e-81 305.4 233 66.1
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 4.5e-81 305.1 201 75.6
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.7e-80 303.1 233 65.7
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.2e-78 297.0 213 67.6
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.3e-77 292.7 201 70.1
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 3.7e-75 285.4 202 68.3
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.4e-74 282.7 212 63.2
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 2.4e-74 282.7 200 68.0
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 4.1e-74 282.0 202 65.8
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.2e-73 280.4 197 68.5
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.3e-72 276.9 195 68.2
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.3e-72 276.9 195 68.2
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.9e-71 273.1 202 65.3
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.9e-71 273.1 196 66.3
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.9e-71 273.1 195 69.2
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.2e-71 272.3 202 64.4
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 4.2e-71 271.9 202 64.4
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 5.5e-71 271.6 218 60.6
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.1e-70 269.6 202 64.4
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.6e-70 268.5 196 66.3
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.0e-69 267.3 196 64.3
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.8e-69 266.5 212 62.3
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.8e-69 266.5 218 62.4
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 3.0e-69 265.8 218 61.0
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 3.9e-69 265.4 198 64.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.9e-68 263.1 218 61.5
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.9e-68 263.1 197 65.0
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 2.5e-68 262.7 218 61.5
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 3.3e-68 262.3 196 63.3
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.3e-68 261.9 218 59.6
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 9.7e-68 260.8 195 64.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.7e-68 260.8 218 59.2
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.6e-67 260.0 201 63.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.6e-67 260.0 201 63.2
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.8e-67 258.5 198 63.1
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 6.3e-67 258.1 212 59.4
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.1e-66 257.3 195 65.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.4e-66 256.9 197 62.9
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.8e-66 256.5 199 62.3
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 2.4e-66 256.1 197 63.5
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 4.1e-66 255.4 197 61.9
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 5.3e-66 255.0 202 60.4
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 9.0e-66 254.2 217 57.1
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.2e-65 253.8 197 62.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.2e-65 253.8 197 61.4
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 2.6e-65 252.7 197 61.4
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.4e-65 252.3 213 61.0
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 4.5e-65 251.9 197 62.4
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 2.2e-64 249.6 197 61.9
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 3.8e-64 248.8 217 54.4
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 5.0e-64 248.4 204 59.8
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 6.5e-64 248.1 214 56.1
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 6.5e-64 248.1 197 61.9
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.1e-63 247.3 203 57.1
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.2e-63 245.7 217 57.1
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 7.2e-63 244.6 194 60.8
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 7.2e-63 244.6 169 68.6
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 9.4e-63 244.2 212 57.5
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 9.4e-63 244.2 194 58.8
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.1e-62 243.0 199 59.8
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 2.7e-62 242.7 193 60.6
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.7e-62 242.7 211 54.5
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.0e-61 240.7 220 55.5
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 4.4e-60 235.3 197 56.3
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.7e-59 232.3 193 57.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 6.3e-59 231.5 194 59.8
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 5.3e-58 228.4 220 54.5
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.6e-57 226.1 195 56.9
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 2.9e-56 222.6 218 50.9
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.7e-54 216.1 202 52.5
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.6e-52 209.5 160 60.0
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.9e-48 196.1 157 61.1
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 5.0e-48 195.3 198 51.0
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.6e-46 190.3 137 67.9
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.9e-40 169.5 199 44.7
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 6.5e-40 168.3 146 56.2
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 8.0e-38 161.4 171 47.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 8.3e-35 151.4 186 42.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 5.9e-33 145.2 124 54.8
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 2.1e-30 136.7 96 65.6
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.8e-29 131.7 118 50.0
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.4e-21 107.5 96 58.3
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 5.7e-20 102.1 81 60.5
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.4e-18 96.7 78 60.3
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.6e-14 82.8 67 59.7
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 9.8e-12 74.7 90 48.9
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.7e-11 72.8 48 70.8
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 2.7e-09 66.6 51 64.7


User provided reference genes

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