Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 2.0e-112 409.1 205 100.0
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 2.5e-102 375.6 205 90.2
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.2e-101 373.2 206 90.3
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 6.2e-101 370.9 205 89.8
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 4.9e-98 361.3 205 85.9
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 1.7e-95 352.8 205 85.9
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 2.5e-94 349.0 205 84.9
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 1.2e-93 346.7 205 83.4
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.4e-92 343.2 205 83.9
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 2.6e-91 339.0 205 81.0
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.7e-88 328.9 202 78.7
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 2.8e-85 318.9 201 75.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 4.0e-84 315.1 233 68.7
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 5.8e-83 311.2 201 73.6
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 7.6e-83 310.8 202 75.2
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 9.9e-83 310.5 201 75.1
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 2.2e-82 309.3 201 74.6
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 8.4e-82 307.4 201 74.1
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 8.4e-82 307.4 201 74.1
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.1e-81 307.0 203 72.9
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.2e-81 305.4 207 72.9
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 7.1e-81 304.3 201 73.6
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 1.6e-80 303.1 201 73.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 2.1e-80 302.8 196 73.5
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 2.7e-80 302.4 196 73.5
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 2.7e-80 302.4 196 73.5
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.0e-79 300.4 202 72.8
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.3e-79 300.1 191 76.4
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 2.3e-79 299.3 201 71.6
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 3.0e-79 298.9 201 74.6
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 5.1e-79 298.1 205 72.2
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 8.7e-79 297.4 197 72.1
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 8.7e-79 297.4 201 72.1
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.1e-78 297.0 201 72.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.5e-78 296.6 201 73.6
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 4.3e-78 295.0 209 71.3
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.3e-77 293.5 196 71.4
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.3e-77 293.5 208 71.6
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.8e-77 292.4 203 72.4
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 1.8e-76 289.7 202 68.8
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 1.8e-76 289.7 203 68.0
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 3.1e-76 288.9 202 67.3
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 9.0e-76 287.3 200 71.5
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.5e-75 286.6 202 66.8
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 1.5e-75 286.6 205 71.2
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 2.6e-75 285.8 202 66.3
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 2.6e-75 285.8 201 69.2
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 4.5e-75 285.0 193 71.5
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 5.8e-75 284.6 191 71.7
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 9.9e-75 283.9 199 67.3
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 9.9e-75 283.9 203 69.5
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 1.7e-74 283.1 221 64.7
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 2.2e-74 282.7 201 67.2
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.1e-73 280.4 201 66.7
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.4e-73 280.0 191 71.7
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 2.4e-73 279.3 194 71.6
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.2e-72 276.9 197 67.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.6e-72 276.6 200 64.5
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.1e-72 276.2 191 68.6
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.6e-72 275.0 201 65.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 7.9e-72 274.2 180 74.4
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 3.9e-71 271.9 217 63.1
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 8.7e-71 270.8 198 67.2
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 8.7e-71 270.8 198 65.7
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.1e-70 270.4 218 61.5
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 2.5e-70 269.2 175 73.7
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 5.6e-70 268.1 198 64.6
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 7.4e-70 267.7 197 65.5
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 8.1e-69 264.2 190 67.4
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 5.3e-68 261.5 205 62.4
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 6.9e-68 261.2 198 60.6
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 4.9e-66 255.0 206 65.5
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 1.9e-65 253.1 164 72.0
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 7.1e-65 251.1 201 60.7
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.2e-64 250.4 189 64.0
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 4.6e-64 248.4 190 64.2
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 6.3e-61 238.0 192 64.6
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 8.2e-61 237.7 201 62.7
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.8e-60 236.5 191 60.7
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 6.5e-58 228.0 156 70.5
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.9e-57 226.5 202 56.9
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 8.7e-55 217.6 156 67.3
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.1e-54 217.2 156 67.9
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 7.4e-54 214.5 196 54.6
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.1e-46 190.7 125 72.0
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.1e-46 190.7 125 72.0
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 3.1e-44 182.6 131 66.4
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.5e-43 178.7 147 60.5
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.0e-42 177.6 201 47.3
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.8e-42 175.6 188 47.9
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 3.2e-41 172.6 146 61.6
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 1.4e-39 167.2 168 54.2
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 2.2e-37 159.8 164 53.0
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.1e-36 156.0 189 43.9
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 9.1e-36 154.5 126 62.7
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.0e-34 151.0 187 40.1
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 1.3e-34 150.6 187 40.6
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 7.2e-33 144.8 132 54.5
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.0e-31 139.0 180 45.6
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 5.7e-30 135.2 161 52.2
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 2.9e-26 122.9 127 45.7
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.1e-25 120.9 115 53.0
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.2e-22 110.9 84 61.9
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.3e-21 107.5 63 74.6
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 4.8e-21 105.5 86 59.3
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 6.3e-21 105.1 88 62.5
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.8e-20 103.6 76 67.1
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 2.7e-19 99.8 159 41.5
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 1.9e-17 93.6 193 33.2
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.8e-15 87.0 107 51.4
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.5e-14 84.0 63 61.9
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 7.0e-12 75.1 62 61.3
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 5.0e-10 68.9 38 73.7
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 3.3e-09 66.2 37 86.5
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 4.0e-07 59.3 44 63.6
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 7.5e-06 55.1 85 41.2


User provided reference genes

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