Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 5.1e-119 431.0 208 100.0
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 2.6e-107 392.1 208 88.0
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 1.6e-104 382.9 208 85.1
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 3.9e-103 378.3 206 85.4
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 6.7e-103 377.5 208 84.1
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 6.7e-103 377.5 208 83.7
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 3.7e-101 371.7 208 83.2
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.0e-95 353.6 208 77.4
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 8.2e-93 344.0 208 74.0
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 2.0e-91 339.3 207 76.8
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 2.0e-91 339.3 207 76.8
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 4.5e-91 338.2 204 74.5
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 5.9e-91 337.8 207 72.9
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 1.0e-90 337.0 204 73.5
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.8e-90 335.1 204 73.0
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.8e-90 335.1 204 73.0
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 5.0e-90 334.7 188 84.6
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 6.5e-90 334.3 204 73.0
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 1.1e-89 333.6 208 72.1
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 2.5e-89 332.4 206 72.3
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 2.5e-89 332.4 205 72.7
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 4.2e-89 331.6 205 71.7
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 1.6e-88 329.7 206 71.8
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.1e-88 329.3 204 72.1
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 8.0e-88 327.4 204 72.1
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.3e-87 325.9 204 69.6
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 8.8e-87 323.9 204 69.1
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.0e-86 322.8 204 69.1
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 3.3e-86 322.0 203 71.4
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 4.4e-86 321.6 205 69.3
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 5.7e-86 321.2 203 70.4
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 9.7e-86 320.5 204 70.6
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 9.7e-86 320.5 204 70.1
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 2.2e-85 319.3 204 68.6
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 2.2e-85 319.3 205 69.3
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 4.8e-85 318.2 204 69.1
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 4.8e-85 318.2 204 68.6
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 1.8e-84 316.2 204 69.1
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 4.1e-84 315.1 203 69.0
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 7.0e-84 314.3 209 69.4
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.2e-83 313.5 208 70.2
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 2.6e-83 312.4 204 65.7
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 2.9e-82 308.9 208 66.3
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 5.0e-82 308.1 204 67.2
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 8.5e-82 307.4 205 66.3
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 1.9e-81 306.2 204 67.6
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 4.2e-81 305.1 204 67.2
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 4.2e-81 305.1 207 65.2
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 7.2e-81 304.3 204 67.6
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 7.2e-81 304.3 204 67.6
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 9.4e-81 303.9 203 66.0
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 9.4e-81 303.9 208 64.9
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 1.6e-80 303.1 207 64.3
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 1.6e-80 303.1 207 64.3
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 2.1e-80 302.8 205 65.4
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 2.7e-80 302.4 205 62.9
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 4.7e-80 301.6 207 64.3
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 8.0e-80 300.8 208 63.9
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 1.0e-79 300.4 207 64.3
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 1.0e-79 300.4 209 64.6
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.4e-79 300.1 205 62.9
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 2.3e-79 299.3 205 62.4
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 1.2e-78 297.0 204 65.7
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 1.5e-78 296.6 207 63.3
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 1.5e-78 296.6 207 63.3
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.5e-78 296.6 201 65.2
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 2.6e-78 295.8 204 64.7
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 5.7e-78 294.7 205 62.9
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 1.3e-77 293.5 204 64.7
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 1.3e-77 293.5 205 61.5
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 1.7e-77 293.1 204 63.2
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 2.2e-77 292.7 161 83.9
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 2.4e-76 289.3 208 63.9
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 5.3e-76 288.1 184 70.1
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.3e-74 283.5 202 63.9
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 6.5e-74 281.2 183 68.3
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 1.1e-73 280.4 213 59.2
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 1.2e-72 276.9 206 62.6
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 1.6e-72 276.6 206 62.1
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 2.1e-72 276.2 205 60.5
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 6.1e-72 274.6 164 74.4
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 2.3e-71 272.7 174 70.7
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 1.7e-69 266.5 178 65.7
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 8.3e-69 264.2 165 70.9
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.0e-66 257.3 184 62.0
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 1.3e-66 256.9 209 57.4
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 3.6e-64 248.8 163 67.5
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 4.9e-61 238.4 145 71.7
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.8e-60 236.5 219 51.1
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 5.4e-60 235.0 161 65.2
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 3.5e-59 232.3 187 56.1
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 7.8e-59 231.1 214 49.5
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 7.8e-59 231.1 214 49.5
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 2.5e-57 226.1 149 66.4
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 7.3e-57 224.6 146 67.8
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 3.1e-55 219.2 214 49.5
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 9.2e-52 207.6 146 60.3
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 5.0e-50 201.8 168 56.5
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 1.1e-49 200.7 122 72.1
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 3.3e-49 199.1 148 60.1
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 3.6e-48 195.7 215 43.7
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 1.1e-44 184.1 121 64.5
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 2.5e-41 172.9 106 67.9
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 9.5e-41 171.0 106 67.0
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 1.7e-37 160.2 162 46.9
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.1e-36 157.5 145 55.9
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 4.0e-31 139.0 156 40.4
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 3.8e-29 132.5 168 36.3
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 6.0e-27 125.2 211 33.2
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 4.3e-25 119.0 105 54.3
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 5.6e-25 118.6 169 35.5
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 4.0e-23 112.5 147 37.4
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 2.0e-22 110.2 278 24.8
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 9.6e-17 91.3 59 67.8
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 1.6e-16 90.5 61 67.2
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 3.2e-12 76.3 54 55.6


User provided reference genes

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