Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 0.0e+00 1238.8 626 100.0
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.2e-296 1022.7 626 84.3
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 8.0e-293 1010.0 631 82.4
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 5.2e-292 1007.3 629 83.0
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.4e-268 929.5 629 75.7
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 6.2e-245 850.9 629 70.1
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.6e-243 845.5 633 70.0
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.9e-242 842.0 635 70.2
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 6.9e-236 820.8 627 68.9
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 4.3e-230 801.6 634 67.2
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.5e-225 785.8 634 66.2
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.8e-196 689.9 636 59.9
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 4.5e-195 685.3 633 58.3
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 5.5e-193 678.3 634 57.7
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 4.4e-190 668.7 634 57.6
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 7.5e-190 667.9 632 57.9
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 3.5e-187 659.1 632 57.6
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.0e-186 657.5 670 54.2
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.5e-185 653.7 633 56.2
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 4.2e-185 652.1 633 56.6
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 5.5e-185 651.7 633 56.2
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 2.3e-183 646.4 644 55.3
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 1.5e-182 643.7 630 55.4
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 2.6e-182 642.9 641 54.6
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.5e-182 641.3 643 56.9
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 2.2e-181 639.8 645 55.2
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 4.9e-181 638.6 640 55.2
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.8e-180 636.7 631 55.2
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 2.4e-180 636.3 639 54.5
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.1e-180 636.0 639 56.5
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.7e-179 632.9 637 54.9
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 5.0e-178 628.6 637 54.6
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 6.6e-178 628.2 646 54.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 8.6e-178 627.9 637 54.8
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 8.6e-178 627.9 635 53.9
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 8.6e-178 627.9 635 54.0
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.1e-177 627.5 640 55.8
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.8e-176 622.9 638 55.2
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 7.5e-174 614.8 617 54.0
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 8.3e-173 611.3 670 51.8
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.4e-172 610.5 633 53.2
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.0e-170 604.4 634 52.4
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 9.5e-169 597.8 615 53.2
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 3.6e-168 595.9 533 57.4
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.5e-166 590.5 633 52.0
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.1e-164 584.3 640 53.1
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.6e-163 580.5 632 50.8
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 5.0e-162 575.5 639 50.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 7.3e-161 571.6 634 49.8
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 6.8e-159 565.1 640 50.9
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.6e-158 563.1 535 58.3
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.4e-158 562.8 632 49.5
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.7e-157 559.3 614 51.0
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 3.2e-156 556.2 533 55.0
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 4.1e-156 555.8 631 50.1
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 5.4e-156 555.4 627 50.6
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 2.1e-155 553.5 658 50.8
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.7e-155 553.1 594 51.0
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.7e-155 553.1 591 50.3
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.3e-154 550.8 632 48.9
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.9e-153 547.0 619 50.1
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 4.3e-153 545.8 635 49.0
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 7.3e-153 545.0 634 49.4
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 9.5e-153 544.7 526 53.2
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 2.1e-152 543.5 643 49.5
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 2.8e-152 543.1 520 55.2
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 6.2e-152 542.0 642 50.2
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 8.1e-152 541.6 630 48.9
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 8.1e-152 541.6 632 47.5
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 8.1e-152 541.6 604 50.3
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 2.3e-151 540.0 637 49.1
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.2e-149 533.5 703 45.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.9e-149 533.1 598 49.8
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.2e-147 527.7 521 53.4
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 2.1e-147 526.9 632 48.6
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.0e-146 524.6 632 48.6
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.3e-146 524.2 697 44.8
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.9e-145 520.4 593 50.1
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.3e-145 519.6 516 54.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.4e-143 514.2 608 50.0
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 1.4e-143 514.2 523 52.6
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 8.9e-143 511.5 642 47.7
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 5.8e-142 508.8 596 49.5
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 5.8e-142 508.8 659 45.4
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 7.6e-142 508.4 660 45.9
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 9.3e-140 501.5 524 52.9
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 2.5e-137 493.4 568 47.7
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.1e-135 488.0 522 49.6
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.4e-135 487.6 496 52.4
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 7.6e-134 481.9 531 50.7
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 3.8e-133 479.6 536 50.4
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.0e-131 472.2 455 53.6
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.5e-129 467.6 658 43.9
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 6.9e-127 458.8 590 46.1
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.8e-122 444.1 615 42.9
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.5e-118 429.5 407 52.1
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 1.2e-110 404.8 488 46.9
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 5.0e-93 346.3 452 46.2
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.4e-87 328.2 486 39.3
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 9.4e-84 315.5 495 38.4
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 7.5e-81 305.8 539 36.5
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 5.9e-78 296.2 592 35.3
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.4e-58 231.9 322 46.9
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.4e-55 221.9 205 55.6
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.0e-53 214.2 319 38.9
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.5e-46 190.7 193 54.4
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 8.1e-43 179.5 572 27.3
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.2e-27 129.0 455 26.6
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 9.9e-25 119.4 370 30.0
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 9.9e-25 119.4 578 22.7
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 5.4e-23 113.6 99 56.6
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 4.2e-15 87.4 68 64.7
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.5e-14 84.3 141 39.7
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.5e-14 84.3 141 39.7
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.0e-14 83.6 141 39.7
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.0e-14 83.6 141 39.7
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 9.6e-12 76.3 113 37.2
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 2.9e-08 64.7 67 58.2
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 6.4e-08 63.5 201 28.4
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 6.0e-06 57.0 369 22.8


User provided reference genes

Program Settings