Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 4.6e-219 764.2 376 100.0
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 2.5e-196 688.7 378 88.9
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 2.3e-194 682.2 380 87.6
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 5.9e-190 667.5 380 85.5
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 7.7e-190 667.2 380 84.2
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 1.5e-185 652.9 379 83.6
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 3.1e-183 645.2 379 82.8
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 7.2e-180 634.0 365 83.6
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 3.6e-179 631.7 379 81.5
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 3.0e-170 602.1 378 78.6
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 5.2e-170 601.3 348 84.5
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 6.3e-168 594.3 382 76.2
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 4.1e-167 591.7 377 76.9
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 5.3e-167 591.3 379 77.0
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 5.3e-167 591.3 377 77.5
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 7.0e-167 590.9 382 75.7
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 7.0e-167 590.9 404 73.0
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 9.1e-167 590.5 379 76.8
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.6e-166 589.7 345 81.7
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.6e-166 589.7 382 75.4
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 2.0e-166 589.3 379 77.0
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 7.7e-166 587.4 381 75.9
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 7.7e-166 587.4 377 76.4
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.0e-165 587.0 380 75.0
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 5.0e-165 584.7 373 76.4
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.9e-164 582.8 380 76.3
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.5e-164 582.4 378 76.2
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 3.6e-163 578.6 379 75.5
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 1.0e-162 577.0 383 75.7
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 2.3e-162 575.9 382 75.1
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 8.8e-162 573.9 383 74.2
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 2.0e-161 572.8 377 76.1
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.0e-161 572.8 377 76.7
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.6e-161 572.4 383 73.9
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 4.4e-161 571.6 318 84.6
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 4.4e-161 571.6 326 83.4
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 7.5e-161 570.9 377 74.3
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 7.5e-161 570.9 377 74.3
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 7.5e-161 570.9 374 73.5
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.7e-160 568.5 383 73.6
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 4.8e-160 568.2 378 73.8
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.4e-159 565.8 395 71.6
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 3.1e-159 565.5 318 83.3
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 4.1e-159 565.1 376 73.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.2e-158 563.5 380 73.2
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.2e-158 563.5 373 74.0
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 1.0e-157 560.5 376 75.8
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.3e-157 560.1 378 74.1
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.9e-157 558.9 376 73.1
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 2.9e-157 558.9 352 75.6
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 3.8e-157 558.5 374 72.5
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 5.0e-157 558.1 373 72.7
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 6.5e-157 557.8 377 72.7
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.5e-156 556.6 378 73.5
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 3.2e-156 555.4 368 73.4
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 4.2e-156 555.1 352 75.6
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 1.6e-155 553.1 377 72.7
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.6e-155 553.1 347 77.5
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.1e-155 552.7 381 71.4
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 3.6e-155 552.0 328 79.0
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.0e-154 550.4 379 71.0
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 3.0e-154 548.9 382 72.3
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 4.0e-154 548.5 378 73.0
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 6.8e-154 547.7 382 69.6
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 6.8e-154 547.7 324 79.9
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 2.6e-153 545.8 377 71.4
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 3.4e-153 545.4 346 73.7
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 4.4e-153 545.0 379 69.7
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 1.3e-152 543.5 367 73.3
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 1.7e-152 543.1 382 69.1
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 1.7e-152 543.1 382 69.1
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 2.8e-152 542.3 382 68.8
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 3.7e-152 542.0 375 69.1
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 3.7e-152 542.0 375 69.1
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 3.7e-152 542.0 355 74.1
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 4.9e-152 541.6 352 71.9
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 6.3e-152 541.2 349 79.1
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 2.4e-151 539.3 353 72.8
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 2.4e-151 539.3 353 72.8
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.4e-151 539.3 307 82.7
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.1e-151 538.9 351 73.5
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 4.1e-151 538.5 399 66.9
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 4.1e-151 538.5 351 73.2
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.4e-151 538.1 376 70.2
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 5.4e-151 538.1 348 73.6
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 5.4e-151 538.1 352 71.9
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.4e-151 538.1 320 77.5
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.9e-150 534.6 350 72.0
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.9e-150 534.6 380 68.4
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-149 533.1 318 78.6
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.7e-149 533.1 330 76.1
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 5.0e-149 531.6 342 73.4
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 2.5e-148 529.3 308 79.2
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 7.2e-148 527.7 319 77.7
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 9.5e-148 527.3 320 75.9
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 9.5e-148 527.3 321 76.6
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 1.2e-147 526.9 380 70.3
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 8.0e-147 524.2 349 77.9
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.8e-146 523.1 336 72.9
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 2.3e-146 522.7 383 70.5
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 3.0e-146 522.3 383 66.3
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 6.8e-146 521.2 378 66.4
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 1.5e-145 520.0 380 66.6
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-144 516.9 380 66.3
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-144 516.5 380 66.3
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 2.2e-144 516.2 314 74.2
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 8.3e-144 514.2 382 66.2
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 7.0e-143 511.1 377 68.7
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 5.9e-142 508.1 350 69.4
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 2.3e-141 506.1 378 66.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 5.0e-141 505.0 322 73.9
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-140 503.8 382 64.9
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.5e-140 502.7 368 67.9
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.8e-139 499.2 317 71.9
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 3.6e-139 498.8 305 73.4
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 6.1e-139 498.0 316 71.5
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 6.1e-139 498.0 341 71.3
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 8.0e-139 497.7 320 72.8
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 3.1e-138 495.7 322 71.1
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.2e-135 485.7 320 72.2
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 9.5e-132 474.2 324 72.5
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 2.8e-131 472.6 325 69.8
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.8e-131 472.6 374 62.6
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.7e-128 463.4 325 71.1
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 7.1e-127 458.0 350 67.1
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 2.1e-126 456.4 355 64.8
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 3.9e-125 452.2 298 68.1
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 4.0e-122 442.2 257 78.2
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 4.0e-122 442.2 257 78.2
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 8.9e-122 441.0 241 86.3
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 2.0e-121 439.9 325 71.4
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 4.4e-121 438.7 293 64.8
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 2.7e-118 429.5 318 61.0
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.1e-115 419.9 265 77.0
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 2.6e-113 412.9 302 63.2
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 3.8e-112 409.1 326 58.0
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.4e-106 390.6 303 58.7
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 6.9e-106 388.3 284 69.7
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.4e-103 380.6 378 52.9
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 9.3e-103 377.9 293 61.1
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.7e-101 373.6 233 72.1
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 3.3e-100 369.4 233 76.8
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 3.2e-95 352.8 196 85.7
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 3.7e-91 339.3 235 71.9
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.8e-91 339.0 200 80.0
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.0e-89 333.6 233 67.0
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 3.4e-89 332.8 216 76.9
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.2e-78 297.7 205 75.6
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 1.7e-72 277.3 358 41.9
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 2.9e-72 276.6 374 43.6
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 4.2e-71 272.7 219 63.9
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 3.6e-70 269.6 323 44.3
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 2.0e-68 263.8 299 46.8
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 6.3e-67 258.8 311 44.4
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.5e-52 211.1 153 70.6
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 4.5e-49 199.5 114 78.1
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 8.8e-45 185.3 355 36.1
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 4.4e-44 183.0 183 56.3
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-36 157.9 94 81.9
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 1.5e-36 157.9 131 64.1
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 2.6e-36 157.1 92 82.6
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-35 154.8 131 63.4
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 2.8e-35 153.7 92 80.4
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 2.8e-35 153.7 94 79.8
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 1.1e-34 151.8 131 61.8
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 1.7e-32 144.4 98 78.6
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 5.2e-29 132.9 75 81.3
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 9.8e-28 128.6 75 77.3
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 8.3e-27 125.6 342 27.2
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 1.4e-26 124.8 66 84.8
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 3.3e-23 113.6 133 49.6
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 5.6e-23 112.8 92 66.3
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.0e-21 108.6 63 74.6
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 1.0e-21 108.6 116 51.7
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 2.7e-17 94.0 61 72.1
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 3.5e-17 93.6 101 54.5
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 2.5e-15 87.4 248 30.2
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.3e-15 87.0 51 78.4
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 1.5e-12 78.2 47 76.6
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 2.2e-11 74.3 42 81.0
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 1.1e-10 72.0 46 67.4
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 2.3e-08 64.3 42 66.7
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 2.3e-08 64.3 42 66.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 4.3e-07 60.1 34 82.4
Cre01.g008891 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D031137 8.1e-06 55.8 58 39.7


User provided reference genes

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