Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 3.6e-163 578.2 291 100.0
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 3.2e-119 432.2 291 80.1
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.2e-115 419.5 295 75.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.4e-114 416.8 292 76.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.2e-110 403.7 293 72.7
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.1e-108 397.1 271 75.3
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.1e-108 397.1 269 79.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.0e-84 316.6 346 52.9
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 8.3e-83 311.2 295 55.9
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.6e-81 307.0 219 64.4
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 5.9e-81 305.1 291 58.8
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.3e-80 303.9 209 68.4
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.7e-80 303.5 243 60.1
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 2.2e-80 303.1 291 55.3
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.2e-80 303.1 287 55.7
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.2e-80 303.1 291 58.8
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 6.5e-80 301.6 235 61.7
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 8.5e-80 301.2 224 62.5
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.1e-79 300.8 209 69.4
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.1e-79 300.8 224 62.9
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.1e-79 300.8 263 56.7
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 1.1e-79 300.8 220 64.1
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 3.2e-79 299.3 219 64.4
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.2e-79 299.3 219 63.5
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 7.2e-79 298.1 222 63.1
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 9.4e-79 297.7 264 56.8
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 9.4e-79 297.7 245 60.0
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.2e-78 297.4 261 57.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.6e-78 297.0 224 62.5
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.6e-78 297.0 222 64.0
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.6e-78 297.0 219 63.0
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.1e-78 296.6 254 58.7
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.7e-78 296.2 261 57.9
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 2.7e-78 296.2 224 62.5
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.0e-77 294.3 211 64.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 3.0e-77 292.7 229 62.0
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 3.0e-77 292.7 260 58.8
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 5.2e-77 292.0 252 57.1
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.5e-76 290.4 224 60.7
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 2.0e-76 290.0 195 71.8
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.6e-76 289.7 214 67.3
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.4e-76 288.9 216 63.4
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 5.7e-76 288.5 245 58.8
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 5.7e-76 288.5 285 51.9
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.3e-75 287.3 264 53.4
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 3.7e-75 285.8 245 59.2
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.7e-75 285.8 205 67.3
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 6.3e-75 285.0 255 56.5
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 6.3e-75 285.0 219 63.5
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.4e-74 283.9 270 58.9
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.4e-74 283.9 219 63.9
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.4e-74 283.1 202 66.3
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.6e-73 280.4 265 53.2
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.7e-73 279.6 223 59.2
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 2.7e-73 279.6 254 56.7
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.0e-72 277.7 273 53.1
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.3e-72 277.3 265 53.6
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.3e-72 277.3 258 53.9
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.7e-72 276.9 240 57.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 2.3e-72 276.6 219 62.6
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.9e-72 276.2 206 65.0
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.6e-72 275.0 231 59.7
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.3e-71 272.7 226 55.8
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 7.2e-71 271.6 216 58.3
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 4.7e-70 268.9 269 52.4
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 3.2e-66 256.1 203 58.1
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 5.4e-66 255.4 206 61.7
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.2e-65 254.2 221 55.2
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.0e-64 251.1 205 57.1
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.9e-63 246.9 205 57.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.3e-63 246.1 213 55.4
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 4.3e-63 245.7 182 64.8
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 4.3e-63 245.7 209 56.5
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.6e-62 242.7 318 43.4
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.8e-61 240.4 249 53.8
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 7.5e-60 235.0 198 57.1
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.7e-59 232.6 186 60.2
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 9.2e-58 228.0 226 54.9
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 6.0e-57 225.3 260 48.1
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 3.9e-56 222.6 217 50.2
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.2e-54 217.6 222 53.2
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 4.4e-52 209.1 234 46.6
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.9e-50 203.8 141 70.2
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.9e-50 203.8 203 48.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.2e-49 201.1 274 43.4
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 2.1e-49 200.3 184 56.0
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.3e-48 196.8 185 53.0
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.9e-47 193.7 141 66.7
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.2e-46 191.0 218 46.3
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 2.6e-44 183.3 204 46.1
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.7e-41 173.3 110 69.1
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.2e-37 159.1 203 47.3
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 1.0e-32 144.8 203 40.9
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.5e-28 131.0 105 59.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 2.9e-27 126.7 146 43.8
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 5.4e-26 122.5 166 42.8
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 3.0e-24 116.7 98 58.2
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.5e-23 114.4 208 38.9
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.3e-23 113.2 102 58.8
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.1e-22 110.5 85 58.8
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 6.0e-17 92.4 84 52.4
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.3e-16 90.5 197 32.5
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 3.9e-16 89.7 294 29.9
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.9e-11 73.6 41 73.2
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.2e-10 70.1 78 44.9
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 9.3e-10 68.6 68 44.1


User provided reference genes

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