Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03515_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 2.1e-52 208.8 108 100.0
Ca_03522_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 2.1e-52 208.8 108 100.0
Medtr2g078770 Medicago truncatula HOM05D000159 ORTHO05D000148 6.9e-19 97.4 89 58.4
TPR.G7939 Trifolium pratense HOM05D000159 ORTHO05D000148 1.7e-17 92.8 89 57.3
Psat5g242120 Pisum sativum HOM05D000159 ORTHO05D000148 3.8e-17 91.7 89 59.6
Phvul.005G074000 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 6.7e-14 80.9 98 51.0
VMungo1080G1216 Vigna mungo HOM05D000159 ORTHO05D000148 8.8e-14 80.5 98 51.0
Glyma.13G274900 Glycine max HOM05D000159 ORTHO05D000148 2.0e-13 79.3 97 50.5
Glyma.12G226000 Glycine max HOM05D000159 ORTHO05D000148 5.3e-11 71.2 93 51.6
arahy.Tifrunner.gnm1.ann1.ND5MUT Arachis hypogaea HOM05D000159 ORTHO05D000148 2.6e-10 68.9 91 48.4
arahy.Tifrunner.gnm1.ann1.XL1QYV Arachis hypogaea HOM05D000159 ORTHO05D000148 2.6e-10 68.9 91 48.4
Cpa.g.sc80.88 Carica papaya HOM05D000159 ORTHO05D000148 7.7e-10 67.4 87 48.3
BcaC08g44047 Brassica carinata HOM05D000159 ORTHO05D000148 2.2e-09 65.9 66 57.6
BolC6t36628H Brassica oleracea HOM05D000159 ORTHO05D000148 2.9e-09 65.5 66 57.6
Psat4g139840 Pisum sativum HOM05D000159 ORTHO05D000148 2.9e-09 65.5 88 47.7
Sp1g39700 Schrenkiella parvula HOM05D000159 ORTHO05D000148 3.8e-09 65.1 66 57.6
Aa31LG10G1980 Aethionema arabicum HOM05D000159 ORTHO05D000148 5.0e-09 64.7 84 52.4
Sc16g0007110 Simmondsia chinensis HOM05D000159 ORTHO05D000148 6.5e-09 64.3 44 75.0
Carub.0003s1492 Capsella rubella HOM05D000159 ORTHO05D000148 8.5e-09 63.9 65 56.9
Eucgr.F03303 Eucalyptus grandis HOM05D000159 ORTHO05D000148 8.5e-09 63.9 65 60.0
BcaB02g10933 Brassica carinata HOM05D000159 ORTHO05D000148 1.1e-08 63.5 66 56.1
Medtr8g463140 Medicago truncatula HOM05D000159 ORTHO05D000148 1.1e-08 63.5 88 46.6
TPR.G22536 Trifolium pratense HOM05D000159 ORTHO05D000148 1.1e-08 63.5 89 48.3
THA.LOC104818089 Tarenaya hassleriana HOM05D000159 ORTHO05D000148 1.9e-08 62.8 58 60.3
BcaC08g43507 Brassica carinata HOM05D000159 ORTHO05D000148 4.2e-08 61.6 66 51.5
C06p08930 Brassica napus HOM05D000159 ORTHO05D000148 4.2e-08 61.6 66 51.5
BolC6t35971H Brassica oleracea HOM05D000159 ORTHO05D000148 4.2e-08 61.6 66 51.5
BraA06t23344Z Brassica rapa HOM05D000159 ORTHO05D000148 5.5e-08 61.2 67 53.7
Thhalv10011728m.g Eutrema salsugineum HOM05D000159 ORTHO05D000148 5.5e-08 61.2 88 48.9
BcaB04g20940 Brassica carinata HOM05D000159 ORTHO05D000148 7.2e-08 60.8 60 56.7
A05p18570 Brassica napus HOM05D000159 ORTHO05D000148 7.2e-08 60.8 66 53.0
BraA05t20751Z Brassica rapa HOM05D000159 ORTHO05D000148 7.2e-08 60.8 66 53.0
Glyma.12G162999 Glycine max HOM05D000159 ORTHO05D000148 7.2e-08 60.8 95 43.2
Sp3g13470 Schrenkiella parvula HOM05D000159 ORTHO05D000148 7.2e-08 60.8 65 53.8
Atru.chr2.2435 Acer truncatum HOM05D000159 ORTHO05D000148 9.4e-08 60.5 86 45.3
Glyma.06G238100 Glycine max HOM05D000159 ORTHO05D000148 9.4e-08 60.5 92 43.5
PSO832G1461 Papaver somniferum HOM05D000159 ORTHO05D000148 9.4e-08 60.5 93 45.2
Aqoxy4G00720 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 1.2e-07 60.1 70 54.3
CSS0021322 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.2e-07 60.1 58 62.1
CiPaw.12G119600 Carya illinoinensis HOM05D000159 ORTHO05D000148 1.2e-07 60.1 61 57.4
PSO675G4132 Papaver somniferum HOM05D000159 ORTHO05D000148 1.2e-07 60.1 66 59.1
Aa31LG8G2450 Aethionema arabicum HOM05D000159 ORTHO05D000148 1.6e-07 59.7 65 56.9
C06p14480 Brassica napus HOM05D000159 ORTHO05D000148 1.6e-07 59.7 59 59.3
Thhalv10021617m.g Eutrema salsugineum HOM05D000159 ORTHO05D000148 1.6e-07 59.7 65 52.3
Lj3g0002686 Lotus japonicus HOM05D000159 ORTHO05D000148 1.6e-07 59.7 92 42.4
Manes.03G106900 Manihot esculenta HOM05D000159 ORTHO05D000148 1.6e-07 59.7 44 77.3
AL3G27660 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 2.1e-07 59.3 65 53.8
Ca_02831_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 2.1e-07 59.3 64 54.7
MD11G1251800 Malus domestica HOM05D000159 ORTHO05D000148 2.1e-07 59.3 49 65.3
Prupe.4G177200 Prunus persica HOM05D000159 ORTHO05D000148 2.1e-07 59.3 66 59.1
PGR042G1074 Punica granatum HOM05D000159 ORTHO05D000148 2.1e-07 59.3 58 58.6
TAR626G0880 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.1e-07 59.3 61 59.0
ATR0752G111 Amborella trichopoda HOM05D000159 ORTHO05D000148 2.7e-07 58.9 44 72.7
AL1G61520 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 2.7e-07 58.9 86 50.0
CDE02G3057 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 2.7e-07 58.9 43 74.4
TAR624G0899 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.7e-07 58.9 58 60.3
CARHR090250 Cardamine hirsuta HOM05D000159 ORTHO05D000148 3.6e-07 58.5 67 55.2
CiPaw.14G024200 Carya illinoinensis HOM05D000159 ORTHO05D000148 3.6e-07 58.5 72 51.4
CDE06G1172 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 3.6e-07 58.5 87 48.3
Duzib160G0615 Durio zibethinus HOM05D000159 ORTHO05D000148 3.6e-07 58.5 58 60.3
Eucgr.K01046 Eucalyptus grandis HOM05D000159 ORTHO05D000148 3.6e-07 58.5 63 57.1
PSO541G0770 Papaver somniferum HOM05D000159 ORTHO05D000148 3.6e-07 58.5 66 59.1
RcHm_v2.0_Chr5g0032861 Rosa chinensis HOM05D000159 ORTHO05D000148 3.6e-07 58.5 39 79.5
SalBow7G1406 Salvia bowleyana HOM05D000159 ORTHO05D000148 3.6e-07 58.5 65 58.5
SalBow7G2874 Salvia bowleyana HOM05D000159 ORTHO05D000148 3.6e-07 58.5 65 58.5
Thecc.06G183900 Theobroma cacao HOM05D000159 ORTHO05D000148 3.6e-07 58.5 58 62.1
VMungo1127G1424 Vigna mungo HOM05D000159 ORTHO05D000148 3.6e-07 58.5 88 44.3
AT3G15270 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 4.7e-07 58.2 65 52.3
Carub.0001s4231 Capsella rubella HOM05D000159 ORTHO05D000148 4.7e-07 58.2 67 53.7
Ciclev10009879m.g Citrus clementina HOM05D000159 ORTHO05D000148 4.7e-07 58.2 65 56.9
Lalb_Chr19g0134151 Lupinus albus HOM05D000159 ORTHO05D000148 4.7e-07 58.2 88 51.1
MD03G1230600 Malus domestica HOM05D000159 ORTHO05D000148 4.7e-07 58.2 68 54.4
TAR627G0666 Trochodendron aralioides HOM05D000159 ORTHO05D000148 4.7e-07 58.2 58 60.3
TAR627G0867 Trochodendron aralioides HOM05D000159 ORTHO05D000148 4.7e-07 58.2 58 60.3
vmacro03911 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 4.7e-07 58.2 58 60.3
Dinv13392 Davidia involucrata HOM05D000159 ORTHO05D000148 6.1e-07 57.8 65 55.4
Dinv14930 Davidia involucrata HOM05D000159 ORTHO05D000148 6.1e-07 57.8 85 47.1
Gohir.A10G027200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 6.1e-07 57.8 58 58.6
Gohir.D10G027600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 6.1e-07 57.8 58 58.6
Gorai.011G029400 Gossypium raimondii HOM05D000159 ORTHO05D000148 6.1e-07 57.8 58 58.6
HPP92_017549 Vanilla planifolia HOM05D000159 ORTHO05D000148 6.1e-07 57.8 65 53.8
Atru.chr6.2956 Acer truncatum HOM05D000159 ORTHO05D000148 8.0e-07 57.4 49 67.3
ClCG11G017960 Citrullus lanatus HOM05D000159 ORTHO05D000148 8.0e-07 57.4 63 60.3
Duzib192G0476 Durio zibethinus HOM05D000159 ORTHO05D000148 8.0e-07 57.4 40 75.0
TWI23G0382 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 8.0e-07 57.4 68 52.9
TWI63G0712 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 8.0e-07 57.4 57 57.9
GSVIVG01014302001 Vitis vinifera HOM05D000159 ORTHO05D000148 8.0e-07 57.4 70 52.9
GSVIVG01021087001 Vitis vinifera HOM05D000159 ORTHO05D000148 8.0e-07 57.4 58 56.9
MSTRG.15870 Avicennia marina HOM05D000159 ORTHO05D000148 1.0e-06 57.0 48 66.7
Duzib213G0865 Durio zibethinus HOM05D000159 ORTHO05D000148 1.0e-06 57.0 61 55.7
Duzib235G0885 Durio zibethinus HOM05D000159 ORTHO05D000148 1.0e-06 57.0 61 55.7
Rhsim13G0179600 Rhododendron simsii HOM05D000159 ORTHO05D000148 1.0e-06 57.0 58 58.6
TWI38G1698 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.0e-06 57.0 39 74.4
A05p11760 Brassica napus HOM05D000159 ORTHO05D000148 1.4e-06 56.6 66 56.1
A06p01170 Brassica napus HOM05D000159 ORTHO05D000148 1.4e-06 56.6 68 52.9
BraA05t20120Z Brassica rapa HOM05D000159 ORTHO05D000148 1.4e-06 56.6 66 56.1
CANSAT35G1879 Cannabis sativa HOM05D000159 ORTHO05D000148 1.4e-06 56.6 58 58.6
CARHR043370 Cardamine hirsuta HOM05D000159 ORTHO05D000148 1.4e-06 56.6 69 56.5
Haze_09446 Corylus avellana HOM05D000159 ORTHO05D000148 1.4e-06 56.6 65 52.3
MD09G1244200 Malus domestica HOM05D000159 ORTHO05D000148 1.4e-06 56.6 95 40.0
QL05p041622 Quercus lobata HOM05D000159 ORTHO05D000148 1.4e-06 56.6 67 55.2
RcHm_v2.0_Chr2g0127621 Rosa chinensis HOM05D000159 ORTHO05D000148 1.4e-06 56.6 58 58.6
Sabra10G0118600 Salix brachista HOM05D000159 ORTHO05D002729 1.4e-06 56.6 45 68.9
Thecc.07G094900 Theobroma cacao HOM05D000159 ORTHO05D000148 1.4e-06 56.6 83 45.8
Ah.04g164720 Amaranthus hybridus HOM05D000159 ORTHO05D000148 1.8e-06 56.2 76 52.6
AT1G53160 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 1.8e-06 56.2 63 58.7
CsaV3_4G033580 Cucumis sativus L. HOM05D000159 ORTHO05D000148 1.8e-06 56.2 63 55.6
Migut.M00166 Erythranthe guttata HOM05D000159 ORTHO05D000148 1.8e-06 56.2 57 50.9
Migut.M01124 Erythranthe guttata HOM05D000159 ORTHO05D000148 1.8e-06 56.2 48 68.8
Gohir.A01G061900 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.8e-06 56.2 83 43.4
Hma1.2p1_0002F.1_g002110 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 1.8e-06 56.2 59 57.6
Potri.008G098600 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.8e-06 56.2 45 66.7
Potri.010G154000 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.8e-06 56.2 45 66.7
MSTRG.6671 Avicennia marina HOM05D000159 ORTHO05D000148 2.3e-06 55.8 98 41.8
Ciclev10016841m.g Citrus clementina HOM05D000159 ORTHO05D000148 2.3e-06 55.8 58 56.9
FvH4_3g19650 Fragaria vesca HOM05D000159 ORTHO05D000148 2.3e-06 55.8 39 74.4
FAN11G3094 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.3e-06 55.8 39 74.4
FAN16G0085 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.3e-06 55.8 39 74.4
FAN21G3098 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.3e-06 55.8 39 74.4
Gohir.D01G048500 Gossypium hirsutum HOM05D000159 ORTHO05D000148 2.3e-06 55.8 83 44.6
Gorai.002G068300 Gossypium raimondii HOM05D000159 ORTHO05D000148 2.3e-06 55.8 83 44.6
PSO210G5411 Papaver somniferum HOM05D000159 ORTHO05D000148 2.3e-06 55.8 90 44.4
Phvul.011G164800 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 2.3e-06 55.8 92 40.2
Solyc10g009080.4 Solanum lycopersicum HOM05D000159 ORTHO05D000148 2.3e-06 55.8 39 71.8
Thecc.02G183100 Theobroma cacao HOM05D000159 ORTHO05D000148 2.3e-06 55.8 91 42.9
TWI39G1043 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 2.3e-06 55.8 72 52.8
Cfa020566 Carpinus fangiana HOM05D000159 ORTHO05D000148 3.0e-06 55.5 65 50.8
Haze_06407 Corylus avellana HOM05D000159 ORTHO05D000148 3.0e-06 55.5 39 71.8
DCAR_020993 Daucus carota HOM05D000159 ORTHO05D000148 3.0e-06 55.5 91 46.2
Eucgr.E03260 Eucalyptus grandis HOM05D000159 ORTHO05D000148 3.0e-06 55.5 58 58.6
Oeu033744.1 Olea europaea HOM05D000159 ORTHO05D000148 3.0e-06 55.5 40 67.5
Potri.001G398200 Populus trichocarpa HOM05D000159 ORTHO05D000148 3.0e-06 55.5 58 56.9
Potri.004G046700 Populus trichocarpa HOM05D000159 ORTHO05D000148 3.0e-06 55.5 39 71.8
Potri.007G138800 Populus trichocarpa HOM05D000159 ORTHO05D000148 3.0e-06 55.5 63 54.0
Potri.011G116800 Populus trichocarpa HOM05D000159 ORTHO05D000148 3.0e-06 55.5 65 53.8
Sabra16G0261000 Salix brachista HOM05D000159 ORTHO05D000148 3.0e-06 55.5 39 74.4
TWI38G0968 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 3.0e-06 55.5 57 57.9
BcaB06g29551 Brassica carinata HOM05D000159 ORTHO05D000148 4.0e-06 55.1 65 52.3
BcaC02g11460 Brassica carinata HOM05D000159 ORTHO05D000148 4.0e-06 55.1 50 64.0
BcaC09g48482 Brassica carinata HOM05D000159 ORTHO05D000148 4.0e-06 55.1 65 50.8
C04p15220 Brassica napus HOM05D000159 ORTHO05D000148 4.0e-06 55.1 50 64.0
BolC4t23095H Brassica oleracea HOM05D000159 ORTHO05D000148 4.0e-06 55.1 50 64.0
BraA05t22241Z Brassica rapa HOM05D000159 ORTHO05D000148 4.0e-06 55.1 65 52.3
Ciclev10017104m.g Citrus clementina HOM05D000159 ORTHO05D000148 4.0e-06 55.1 68 54.4
Rhsim04G0070000 Rhododendron simsii HOM05D000159 ORTHO05D000148 4.0e-06 55.1 58 53.4
vmacro11882 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 4.0e-06 55.1 39 71.8
Atru.chr10.1842 Acer truncatum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 59 59.3
Aa31sc652G40 Aethionema arabicum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 47 66.0
Aa31sc652G90 Aethionema arabicum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 47 66.0
AL4G29580 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 5.2e-06 54.7 48 64.6
A05p34220 Brassica napus HOM05D000159 ORTHO05D000148 5.2e-06 54.7 65 52.3
C05p51970 Brassica napus HOM05D000159 ORTHO05D000148 5.2e-06 54.7 65 52.3
CAN.G313.8 Capsicum annuum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 39 71.8
ClCG10G017410 Citrullus lanatus HOM05D000159 ORTHO05D000148 5.2e-06 54.7 43 65.1
COL.COLO4_05957 Corchorus olitorius HOM05D000159 ORTHO05D000148 5.2e-06 54.7 65 50.8
MELO3C025597.2 Cucumis melo HOM05D000159 ORTHO05D000148 5.2e-06 54.7 58 55.2
Duzib052G1134 Durio zibethinus HOM05D000159 ORTHO05D000148 5.2e-06 54.7 65 52.3
FAN02G0595 Fragaria x ananassa HOM05D000159 ORTHO05D000148 5.2e-06 54.7 58 56.9
Lj1A1202G62 Lonicera japonica HOM05D000159 ORTHO05D000148 5.2e-06 54.7 58 58.6
MBI02_g32445_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 5.2e-06 54.7 72 51.4
Psat1g203760 Pisum sativum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 37 75.7
Potri.011G055900 Populus trichocarpa HOM05D000159 ORTHO05D000148 5.2e-06 54.7 39 69.2
PGR031G2608 Punica granatum HOM05D000159 ORTHO05D000148 5.2e-06 54.7 78 48.7
QL08p039703 Quercus lobata HOM05D000159 ORTHO05D000148 5.2e-06 54.7 64 56.2
SHI16034 Sapria himalayana HOM05D000159 ORTHO05D000148 5.2e-06 54.7 32 81.2
Zm00001eb105640 Zea mays HOM05D000159 ORTHO05D000148 5.2e-06 54.7 69 47.8
Actinidia30465 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.7e-06 54.3 52 57.7
BcaB01g03918 Brassica carinata HOM05D000159 ORTHO05D000148 6.7e-06 54.3 48 66.7
A03p18910 Brassica napus HOM05D000159 ORTHO05D000148 6.7e-06 54.3 48 66.7
BraA03t11150Z Brassica rapa HOM05D000159 ORTHO05D000148 6.7e-06 54.3 48 66.7
Cpa.g.sc27.40 Carica papaya HOM05D000159 ORTHO05D000148 6.7e-06 54.3 39 66.7
HanXRQChr17g0554391 Helianthus annuus HOM05D000159 ORTHO05D000148 6.7e-06 54.3 50 60.0
Peaxi162Scf00003g04342 Petunia axillaris HOM05D000159 ORTHO05D000148 6.7e-06 54.3 32 81.2
Sed0023249 Sechium edule HOM05D000159 ORTHO05D000148 6.7e-06 54.3 63 55.6
Sopen10g004860 Solanum pennellii HOM05D000159 ORTHO05D000148 6.7e-06 54.3 58 55.2
TAR629G3115 Trochodendron aralioides HOM05D000159 ORTHO05D000148 6.7e-06 54.3 58 58.6
C01p49320 Brassica napus HOM05D000159 ORTHO05D000148 8.8e-06 53.9 65 49.2
CSS0018608 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 8.8e-06 53.9 38 73.7
CARHR127930 Cardamine hirsuta HOM05D000159 ORTHO05D000148 8.8e-06 53.9 48 64.6
CiPaw.03G179400 Carya illinoinensis HOM05D000159 ORTHO05D000148 8.8e-06 53.9 72 47.2
CiPaw.13G030600 Carya illinoinensis HOM05D000159 ORTHO05D000148 8.8e-06 53.9 41 65.9
Dinv17331 Davidia involucrata HOM05D000159 ORTHO05D000148 8.8e-06 53.9 58 56.9
Lsat_1_v5_gn_3_37960 Lactuca sativa HOM05D000159 ORTHO05D000148 8.8e-06 53.9 55 58.2
Lj6g0009941 Lotus japonicus HOM05D000159 ORTHO05D000148 8.8e-06 53.9 37 73.0
Peaxi162Scf00031g01525 Petunia axillaris HOM05D000159 ORTHO05D000148 8.8e-06 53.9 38 76.3
Sp4g16200 Schrenkiella parvula HOM05D000159 ORTHO05D000148 8.8e-06 53.9 29 93.1
SEGI_30004 Sequoiadendron giganteum HOM05D000159 ORTHO05D000148 8.8e-06 53.9 28 92.9


User provided reference genes

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