Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03511_v3 Cicer arietinum L. HOM05D009986 ORTHO05D012024 1.0e-15 85.9 54 100.0
Medtr2g078920 Medicago truncatula HOM05D009986 ORTHO05D012024 1.3e-10 68.9 36 88.9
Glyma.12G225700 Glycine max HOM05D009986 ORTHO05D012024 2.5e-09 64.7 32 90.6
Glyma.13G275300 Glycine max HOM05D009986 ORTHO05D012024 2.5e-09 64.7 32 90.6
Phvul.005G073600 Phaseolus vulgaris HOM05D009986 ORTHO05D012024 4.3e-09 63.9 43 79.1
Lj3g0024428 Lotus japonicus HOM05D009986 ORTHO05D012024 4.7e-08 60.5 30 86.7
CiPaw.11G170900 Carya illinoinensis HOM05D009986 ORTHO05D012024 6.1e-08 60.1 30 86.7
CANSAT56G3963 Cannabis sativa HOM05D009986 ORTHO05D012024 8.0e-08 59.7 30 86.7
Potri.011G117001 Populus trichocarpa HOM05D009986 ORTHO05D012024 1.4e-07 58.9 37 78.4
RcHm_v2.0_Chr5g0033001 Rosa chinensis HOM05D009986 ORTHO05D012024 1.4e-07 58.9 27 92.6
Cfa020569 Carpinus fangiana HOM05D009986 ORTHO05D012024 1.8e-07 58.5 28 89.3
Manes.15G088200 Manihot esculenta HOM05D009986 ORTHO05D012024 1.8e-07 58.5 39 71.8
TPR.G7941 Trifolium pratense HOM05D009986 ORTHO05D012024 1.8e-07 58.5 26 96.2
Potri.001G398700 Populus trichocarpa HOM05D009986 ORTHO05D012024 2.3e-07 58.2 35 74.3
Carub.0008s1417 Capsella rubella HOM05D009986 ORTHO05D012024 4.0e-07 57.4 38 71.1
Duzib213G0206 Durio zibethinus HOM05D009986 ORTHO05D012024 5.2e-07 57.0 30 83.3
Actinidia18774 Actinidia chinensis HOM05D009986 ORTHO05D012024 3.4e-06 54.3 29 79.3
THA.LOC104811871 Tarenaya hassleriana HOM05D009986 ORTHO05D012024 5.8e-06 53.5 24 91.7


User provided reference genes

Program Settings