Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 9.6e-101 370.2 187 100.0
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.1e-85 320.1 189 87.3
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.0e-77 292.7 189 81.5
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 2.2e-76 289.3 189 81.5
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.8e-73 278.5 198 73.2
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 3.2e-72 275.4 197 74.6
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.7e-71 272.3 197 74.6
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.0e-69 266.2 196 73.5
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 6.3e-68 261.2 195 70.8
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.0e-65 253.8 197 70.1
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 5.5e-64 248.1 187 70.6
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 7.2e-64 247.7 197 68.5
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 6.3e-60 234.6 194 63.4
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 7.0e-59 231.1 196 62.8
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 3.5e-58 228.8 195 63.1
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 5.9e-58 228.0 191 61.8
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 7.7e-58 227.6 245 53.9
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.0e-57 227.3 189 61.9
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.2e-57 226.1 191 61.3
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.0e-57 224.9 190 63.2
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 6.5e-57 224.6 191 61.3
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.1e-56 223.8 193 61.7
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.9e-56 223.0 140 73.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 2.5e-56 222.6 190 62.6
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.5e-56 222.6 190 62.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 5.5e-56 221.5 140 73.6
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 9.4e-56 220.7 191 61.3
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 9.4e-56 220.7 207 58.9
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 9.4e-56 220.7 142 71.8
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.2e-55 220.3 168 61.9
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.6e-55 218.8 190 61.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 3.6e-55 218.8 192 61.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 6.1e-55 218.0 189 63.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 6.1e-55 218.0 196 60.7
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 8.0e-55 217.6 188 59.0
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.0e-54 217.2 186 59.7
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.8e-54 216.5 196 59.7
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.3e-54 216.1 145 80.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.3e-54 216.1 195 59.0
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 4.0e-54 215.3 188 61.2
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.0e-54 215.3 186 59.1
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 6.8e-54 214.5 186 58.6
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 8.8e-54 214.2 190 57.9
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 8.8e-54 214.2 194 58.8
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 8.8e-54 214.2 196 60.2
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 8.8e-54 214.2 197 58.4
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 2.0e-53 213.0 187 56.7
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 5.7e-53 211.5 191 57.6
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 9.8e-53 210.7 192 58.3
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.3e-52 210.3 196 59.2
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 3.7e-52 208.8 175 61.1
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 3.7e-52 208.8 196 58.7
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 4.8e-52 208.4 191 57.6
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 4.8e-52 208.4 183 60.1
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 4.8e-52 208.4 196 58.2
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.3e-52 208.0 211 55.9
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 8.3e-52 207.6 197 55.8
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.8e-51 206.5 177 61.6
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.4e-51 206.1 171 60.2
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.4e-51 206.1 170 59.4
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.4e-51 206.1 187 56.1
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 7.0e-51 204.5 181 61.3
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 7.0e-51 204.5 140 69.3
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 7.0e-51 204.5 194 55.2
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 9.1e-51 204.1 183 57.9
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 9.1e-51 204.1 199 57.8
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.2e-50 203.8 193 56.5
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.2e-50 203.8 156 63.5
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.6e-50 203.4 167 61.7
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 2.0e-50 203.0 167 61.7
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 2.7e-50 202.6 167 61.7
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.7e-50 202.6 196 56.1
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.5e-50 201.8 191 56.0
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 4.5e-50 201.8 142 67.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 7.7e-50 201.1 167 60.5
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 7.7e-50 201.1 191 56.0
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-49 200.3 142 66.9
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 2.2e-49 199.5 191 56.0
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.2e-49 199.5 195 56.9
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.2e-49 199.5 190 54.7
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.2e-49 199.5 190 54.7
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 3.8e-49 198.7 187 57.2
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.8e-49 198.7 200 55.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.1e-48 197.2 189 55.6
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.1e-48 197.2 187 55.6
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.5e-48 196.8 199 54.3
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.9e-48 196.4 211 52.1
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.9e-48 196.4 196 54.6
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 4.2e-48 195.3 184 57.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 4.2e-48 195.3 160 60.0
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 5.5e-48 194.9 177 58.8
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 2.1e-47 193.0 187 55.1
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.7e-47 192.6 201 52.2
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.7e-47 191.8 180 55.6
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 6.8e-46 188.0 217 50.2
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 8.8e-46 187.6 115 81.7
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 8.8e-46 187.6 189 54.5
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.5e-45 186.8 111 76.6
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.1e-43 180.6 173 52.6
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 2.4e-43 179.5 217 49.3
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.4e-43 179.5 176 53.4
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 1.2e-42 177.2 140 59.3
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 2.3e-41 172.9 117 69.2
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.9e-41 172.6 154 54.5
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 5.0e-41 171.8 116 66.4
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 1.9e-40 169.9 112 69.6
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.9e-40 169.9 116 68.1
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.6e-39 166.8 146 63.0
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.8e-38 163.3 112 62.5
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.5e-37 160.2 125 59.2
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 4.4e-37 158.7 123 57.7
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 4.9e-36 155.2 91 76.9
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 8.3e-36 154.5 153 57.5
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.7e-34 149.4 122 60.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 4.6e-34 148.7 120 63.3
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 7.8e-34 147.9 148 56.8
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.5e-32 143.7 109 60.6
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.9e-32 143.3 152 54.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.1e-31 139.8 100 63.0
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.0e-30 137.5 89 67.4
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.5e-29 133.7 109 56.9
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 8.3e-28 127.9 124 46.8
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 4.3e-24 115.5 115 49.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.2e-23 114.0 73 65.8
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 4.7e-23 112.1 117 54.7
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.5e-21 107.1 89 53.9
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.4e-21 105.9 120 54.2
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.1e-19 100.9 128 42.2
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 5.1e-17 92.0 157 44.6
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.5e-13 80.5 128 40.6
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.3e-12 77.4 109 36.7
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.2e-12 76.6 130 40.8
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.1e-06 57.8 38 65.8
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 2.4e-06 56.6 43 55.8


User provided reference genes

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