Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.4e-73 279.6 153 100.0
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 1.3e-58 229.9 153 86.3
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 3.7e-58 228.4 154 83.1
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 1.1e-49 200.3 140 78.6
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 4.1e-49 198.4 149 74.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.9e-46 189.5 154 74.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.3e-44 182.6 117 83.8
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.0e-44 182.2 158 70.9
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 6.3e-42 174.5 150 66.0
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 3.1e-41 172.2 150 65.3
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.0e-39 167.2 134 69.4
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.3e-38 161.8 132 67.4
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 4.3e-38 161.8 136 64.7
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 5.6e-38 161.4 124 70.2
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.8e-37 159.1 117 73.5
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.8e-37 159.1 117 73.5
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 3.6e-37 158.7 123 74.8
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 8.0e-37 157.5 124 68.5
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.4e-36 156.8 133 65.4
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.8e-36 156.4 121 71.9
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.8e-36 156.4 135 64.4
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.8e-36 156.4 133 66.9
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.0e-36 155.2 138 64.5
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 6.8e-36 154.5 124 69.4
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 8.9e-36 154.1 138 64.5
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.5e-35 153.3 138 65.2
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.0e-35 152.9 125 68.0
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 2.6e-35 152.5 131 64.9
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 5.7e-35 151.4 99 82.8
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 7.5e-35 151.0 133 62.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.7e-34 149.8 130 63.8
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.2e-34 149.4 120 70.0
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.9e-34 149.1 117 68.4
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 3.7e-34 148.7 118 70.3
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 3.7e-34 148.7 128 64.8
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 6.4e-34 147.9 110 71.8
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.4e-33 146.7 122 65.6
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.4e-33 146.0 121 66.1
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.2e-33 145.6 125 64.8
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 3.2e-33 145.6 134 61.9
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 7.0e-33 144.4 129 65.1
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.0e-33 144.4 125 65.6
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.2e-32 143.7 118 68.6
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 2.0e-32 142.9 111 72.1
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 2.7e-32 142.5 118 66.9
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 4.6e-32 141.7 134 61.2
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 5.9e-32 141.4 100 75.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.8e-32 141.0 120 65.0
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.8e-32 141.0 120 65.0
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.0e-31 140.6 117 65.8
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 1.3e-31 140.2 119 66.4
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.7e-31 139.8 120 64.2
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.7e-31 139.8 107 71.0
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 3.0e-31 139.0 167 51.5
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.9e-30 136.3 107 69.2
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 9.5e-30 134.0 116 64.7
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.2e-29 133.7 108 63.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.1e-29 132.9 115 66.1
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.1e-29 132.9 116 62.1
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.2e-28 128.3 148 53.4
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.2e-28 128.3 116 58.6
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.2e-27 127.1 132 57.6
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.5e-27 126.7 175 48.0
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 2.0e-27 126.3 139 53.2
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 2.6e-27 125.9 131 57.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.6e-27 125.9 126 56.3
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 5.8e-27 124.8 105 64.8
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 7.5e-27 124.4 118 61.9
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 7.5e-27 124.4 118 61.9
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 7.5e-27 124.4 105 65.7
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 7.5e-27 124.4 118 61.9
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 7.5e-27 124.4 118 61.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 7.5e-27 124.4 105 65.7
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 7.5e-27 124.4 135 54.1
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 9.8e-27 124.0 118 61.0
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.2e-26 122.9 105 63.8
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 2.2e-26 122.9 127 59.1
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.9e-26 122.5 129 57.4
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.7e-26 122.1 105 64.8
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 4.9e-26 121.7 107 60.7
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 8.3e-26 120.9 111 63.1
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 8.3e-26 120.9 105 64.8
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 1.1e-25 120.6 117 58.1
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 2.4e-25 119.4 90 75.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.6e-24 116.7 111 62.2
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 3.0e-23 112.5 122 54.1
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.0e-23 112.5 109 56.0
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 1.1e-22 110.5 92 64.1
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 2.1e-21 106.3 90 66.7
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.8e-21 105.9 75 73.3
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 3.6e-21 105.5 86 61.6
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 6.2e-21 104.8 86 66.3
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 1.4e-20 103.6 85 63.5
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.4e-20 103.6 88 62.5
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 4.0e-20 102.1 101 56.4
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 2.0e-19 99.8 75 69.3
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.4e-19 98.6 79 65.8
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 5.8e-19 98.2 72 69.4
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.5e-19 97.8 78 64.1
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.2e-18 96.3 74 67.6
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 1.9e-17 93.2 85 61.2
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.2e-16 90.5 70 67.1
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 4.3e-14 82.0 117 51.3
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 4.3e-14 82.0 117 51.3
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 7.3e-14 81.3 83 61.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 2.6e-11 72.8 75 56.0
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 5.8e-11 71.6 59 59.3
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 9.9e-11 70.9 46 73.9
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 3.8e-10 68.9 94 43.6
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 3.8e-10 68.9 52 73.1
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 6.4e-10 68.2 56 66.1
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 6.4e-10 68.2 95 41.1
arahy.Tifrunner.gnm1.ann1.N1ZXMW Arachis hypogaea HOM05D006869 ORTHO05D008641 9.6e-06 54.3 46 65.2


User provided reference genes

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