Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 7.6e-144 513.8 264 100.0
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 4.6e-125 451.4 264 86.7
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 1.8e-124 449.5 263 88.6
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 3.9e-124 448.4 260 86.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 2.3e-116 422.5 264 81.1
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 2.5e-115 419.1 264 81.1
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 2.0e-112 409.5 260 80.8
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 7.7e-112 407.5 264 78.8
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 2.2e-111 406.0 264 78.4
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 4.2e-110 401.7 265 79.6
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 2.1e-109 399.4 264 78.8
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 4.1e-89 332.0 251 67.7
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 5.9e-88 328.2 251 67.7
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 1.3e-87 327.0 251 66.5
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 8.5e-87 324.3 251 65.7
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 1.5e-86 323.6 250 67.6
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.5e-86 322.8 251 64.5
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 5.5e-86 321.6 251 64.5
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 6.1e-85 318.2 251 65.3
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 6.8e-84 314.7 251 64.5
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 3.4e-83 312.4 241 67.2
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.4e-83 312.0 252 63.1
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 5.7e-83 311.6 252 65.5
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 7.5e-83 311.2 251 63.7
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 2.8e-82 309.3 264 60.6
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 1.1e-81 307.4 248 64.1
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.4e-81 307.0 272 58.8
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 3.1e-81 305.8 252 62.3
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 7.0e-81 304.7 247 62.8
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 1.6e-80 303.5 257 61.1
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 1.0e-79 300.8 252 62.3
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 5.0e-79 298.5 251 61.8
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.5e-78 296.2 251 61.4
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 9.5e-78 294.3 251 62.5
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 2.1e-77 293.1 252 61.5
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 3.6e-77 292.4 257 62.6
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 3.6e-77 292.4 230 65.7
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.0e-76 290.8 272 55.9
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.4e-76 290.4 230 66.1
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 4.0e-76 288.9 246 60.2
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 5.2e-76 288.5 251 57.4
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.2e-75 287.3 227 64.8
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.0e-75 286.6 251 61.0
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 2.0e-75 286.6 292 55.8
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 9.8e-75 284.3 251 57.4
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 1.3e-74 283.9 260 55.4
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.9e-74 282.7 251 58.2
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 4.9e-74 282.0 251 58.6
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 1.1e-73 280.8 251 58.6
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.4e-73 280.4 239 61.5
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 5.4e-73 278.5 270 58.1
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 7.0e-73 278.1 251 58.2
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 1.2e-72 277.3 245 60.4
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-72 276.9 251 59.0
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 2.7e-72 276.2 251 57.0
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 2.7e-72 276.2 250 55.6
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 3.5e-72 275.8 251 59.8
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 7.8e-72 274.6 264 54.2
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.7e-71 273.5 251 58.6
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.3e-71 273.1 251 58.6
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.0e-71 272.7 251 58.6
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 3.0e-71 272.7 250 54.8
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.1e-70 270.8 257 57.2
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.9e-70 270.0 259 54.1
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 9.5e-70 267.7 241 56.4
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.2e-69 267.3 252 56.3
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.1e-69 266.5 252 55.6
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 2.1e-69 266.5 230 60.9
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 3.6e-69 265.8 252 54.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.2e-69 265.0 204 67.2
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.0e-69 264.6 259 53.3
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.0e-68 264.2 252 55.6
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.0e-68 264.2 250 52.8
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 4.0e-68 262.3 262 51.9
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 4.0e-68 262.3 262 51.9
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 5.2e-68 261.9 264 52.3
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 6.8e-68 261.5 264 52.7
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 8.9e-68 261.2 252 54.4
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-67 260.8 264 52.3
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 2.0e-67 260.0 236 60.6
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 7.5e-67 258.1 245 55.1
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 9.8e-67 257.7 252 54.4
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 9.8e-67 257.7 252 54.4
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 2.2e-66 256.5 258 53.9
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 6.4e-66 255.0 246 54.5
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 2.4e-65 253.1 252 54.4
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 6.6e-63 245.0 277 48.0
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 6.2e-61 238.4 248 52.8
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.8e-60 236.9 246 52.8
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 6.8e-60 235.0 217 55.3
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 5.8e-59 231.9 245 54.3
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 1.3e-58 230.7 188 61.2
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 1.9e-57 226.9 249 49.4
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 3.2e-57 226.1 252 50.8
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.8e-53 213.0 327 41.6
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 5.8e-51 205.3 186 56.5
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 5.4e-49 198.7 224 51.3
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 8.6e-47 191.4 165 60.0
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 8.1e-45 184.9 245 45.3
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 1.1e-44 184.5 169 52.7
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 5.2e-44 182.2 149 60.4
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 6.6e-39 165.2 137 62.8
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 8.1e-37 158.3 249 40.6
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.6e-32 144.1 110 68.2
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.8e-28 130.6 136 49.3
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-26 123.2 116 54.3
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-26 123.2 116 54.3
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 3.3e-22 109.8 206 35.9
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 9.6e-22 108.2 89 59.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 3.1e-20 103.2 129 47.3
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 7.6e-19 98.6 154 37.0
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 1.3e-18 97.8 226 29.6
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 6.0e-16 89.0 80 56.2
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 6.3e-13 79.0 94 45.7
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 1.1e-12 78.2 75 54.7
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 6.5e-10 68.9 149 30.2
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 1.4e-09 67.8 80 43.8
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea HOM05D006609 ORTHO05D008551 6.7e-07 58.9 53 56.6


User provided reference genes

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