Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.9e-198 695.7 349 100.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 6.1e-165 584.3 364 83.2
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 7.4e-163 577.4 355 85.6
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 3.1e-153 545.4 355 79.7
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 2.6e-152 542.3 356 80.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.4e-152 542.0 359 79.7
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 8.5e-151 537.3 348 80.7
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.4e-148 530.0 348 80.2
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.1e-145 518.5 341 78.0
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.0e-144 516.2 341 78.0
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.3e-143 513.5 334 77.8
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 9.4e-142 507.3 312 81.7
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.2e-141 506.9 362 72.4
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.6e-141 506.5 360 73.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 8.0e-141 504.2 345 74.8
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.3e-140 502.7 349 75.6
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 3.0e-140 502.3 304 83.2
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-139 499.6 364 73.1
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 2.6e-139 499.2 300 83.7
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 9.7e-139 497.3 360 71.9
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.3e-138 496.9 361 72.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.7e-138 496.5 306 80.7
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 2.2e-138 496.1 350 74.3
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 2.8e-138 495.7 308 80.5
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 3.7e-138 495.4 339 76.1
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 6.3e-138 494.6 309 80.3
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.1e-137 493.8 368 70.7
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.4e-137 493.4 358 70.9
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.8e-137 493.0 350 74.0
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.4e-137 492.7 362 72.4
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.4e-137 492.7 350 73.1
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.1e-137 492.3 318 78.6
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 4.1e-137 491.9 312 78.5
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 5.3e-137 491.5 317 79.5
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 5.3e-137 491.5 312 78.5
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 9.1e-137 490.7 313 79.2
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.2e-136 490.3 324 77.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.2e-136 490.3 365 71.0
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 2.7e-136 489.2 320 78.1
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.7e-136 489.2 308 79.5
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 3.5e-136 488.8 333 75.1
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 5.9e-136 488.0 307 78.2
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 7.7e-136 487.6 317 77.9
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 7.7e-136 487.6 321 78.5
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.0e-135 487.3 303 80.5
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.7e-135 486.5 306 78.8
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.7e-135 486.5 304 78.3
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.7e-135 486.5 326 74.5
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.7e-135 486.5 310 79.4
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 5.0e-135 485.0 321 76.0
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 5.0e-135 485.0 305 79.3
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 6.5e-135 484.6 303 79.5
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.1e-134 483.8 321 76.0
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.2e-134 482.3 303 78.9
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 2.1e-133 479.6 323 78.3
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.8e-132 476.5 303 79.2
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 3.0e-132 475.7 322 74.8
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.0e-132 475.3 339 71.1
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 8.8e-132 474.2 350 71.1
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.5e-131 473.4 304 77.0
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 4.4e-131 471.9 304 77.3
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 4.4e-131 471.9 300 78.0
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 5.7e-131 471.5 304 76.6
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 9.8e-131 470.7 304 77.3
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 9.8e-131 470.7 304 77.3
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 2.2e-130 469.5 269 84.4
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.7e-130 468.8 322 73.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.4e-129 466.8 299 78.3
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.8e-129 466.5 303 77.2
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.8e-129 466.5 321 73.2
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 2.4e-129 466.1 321 73.2
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.2e-128 463.8 322 73.3
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.0e-128 463.0 294 79.3
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 5.9e-128 461.5 367 67.6
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 6.5e-127 458.0 278 80.2
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 7.2e-126 454.5 337 70.6
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 3.0e-124 449.1 299 74.9
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 5.2e-124 448.4 350 69.1
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 8.8e-124 447.6 306 75.5
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 6.3e-122 441.4 456 55.9
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.3e-119 433.7 301 73.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.1e-118 430.6 307 70.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 3.3e-118 429.1 456 54.4
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.2e-117 427.2 295 72.9
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 3.7e-114 415.6 491 49.9
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.4e-113 413.7 308 67.9
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 3.5e-112 409.1 308 67.2
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 1.0e-111 407.5 300 68.3
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.6e-109 400.2 286 69.9
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.4e-105 386.3 215 89.3
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 8.6e-103 377.9 309 62.5
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 5.6e-102 375.2 352 61.1
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 5.8e-99 365.2 289 68.9
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.4e-98 361.7 237 77.6
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 2.9e-90 336.3 201 83.6
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 2.5e-86 323.2 166 97.6
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.6e-86 322.0 303 59.1
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 2.8e-85 319.7 320 53.4
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 5.8e-83 312.0 169 92.9
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.0e-80 302.0 202 76.7
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 8.7e-79 298.1 243 65.8
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.3e-77 294.3 243 65.4
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.0e-76 288.1 194 76.3
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.0e-75 287.0 194 75.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.7e-74 283.9 191 78.0
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 4.6e-72 275.8 167 83.8
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.8e-71 273.9 257 52.5
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 6.2e-69 265.4 144 88.9
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 8.1e-69 265.0 150 86.7
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.3e-63 246.9 188 68.6
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.4e-57 227.6 259 47.1
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.9e-57 227.3 181 64.6
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.2e-51 208.0 141 70.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.7e-45 186.4 108 85.2
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 4.4e-38 162.9 97 79.4
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 6.7e-31 139.0 110 61.8
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 3.3e-30 136.7 80 85.0
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 8.2e-29 132.1 235 35.3
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.3e-22 110.2 254 32.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 9.7e-22 108.6 114 48.2
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 2.5e-17 94.0 49 85.7
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 4.1e-12 76.6 58 69.0
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.9e-09 67.8 71 52.1


User provided reference genes

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