Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 3.9e-75 284.6 138 100.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.0e-67 260.0 138 87.7
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.5e-66 255.4 138 88.4
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.5e-66 255.4 138 85.5
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 3.7e-65 251.5 138 84.8
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 2.4e-64 248.8 135 87.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.0e-62 243.4 138 84.1
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 7.9e-60 233.8 135 80.7
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 7.9e-60 233.8 135 80.7
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.3e-59 232.3 138 78.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 5.1e-59 231.1 139 77.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 6.7e-59 230.7 136 80.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.1e-58 229.9 136 77.2
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.1e-58 229.9 136 80.1
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.5e-58 229.6 135 78.5
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.5e-58 229.6 135 78.5
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.0e-58 229.2 138 76.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.3e-58 228.4 138 76.1
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.3e-58 228.4 138 77.5
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.7e-58 227.6 135 77.8
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 5.7e-58 227.6 135 77.8
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-57 226.5 136 77.2
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.7e-57 226.1 134 79.1
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 3.7e-57 224.9 136 77.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 8.2e-57 223.8 138 76.8
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.1e-56 221.9 136 77.2
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.1e-56 221.5 136 75.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.3e-56 221.1 136 75.7
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 7.0e-56 220.7 135 74.1
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 9.1e-56 220.3 136 75.7
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.2e-55 219.9 141 74.5
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 2.0e-55 219.2 141 75.9
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.5e-55 218.4 134 74.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 3.5e-55 218.4 136 75.7
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 4.5e-55 218.0 136 72.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.9e-55 217.6 138 72.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 5.9e-55 217.6 136 72.1
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.0e-54 216.9 131 76.3
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.3e-54 216.5 132 76.5
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.7e-54 216.1 139 71.9
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.8e-54 214.9 136 73.5
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.5e-54 214.2 136 73.5
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.9e-53 212.6 135 74.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.5e-53 212.2 139 71.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 3.2e-53 211.8 136 72.8
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.2e-53 211.5 136 69.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 7.2e-53 210.7 136 70.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 7.2e-53 210.7 136 69.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 9.4e-53 210.3 136 69.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.6e-52 209.5 138 72.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.1e-52 209.1 137 71.5
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.1e-52 209.1 137 71.5
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.1e-52 209.1 137 69.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.7e-52 208.8 137 72.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 8.0e-52 207.2 133 68.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.4e-51 206.5 140 69.3
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.4e-51 206.5 118 81.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.8e-51 206.1 138 70.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.3e-51 205.7 136 73.5
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 3.0e-51 205.3 136 72.8
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.9e-51 204.9 142 67.6
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.1e-50 203.4 120 80.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.5e-50 203.0 135 69.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.0e-50 202.6 133 67.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.6e-50 202.2 120 80.0
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.3e-50 201.8 118 78.0
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 4.4e-50 201.4 136 69.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 7.4e-50 200.7 116 82.8
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.3e-49 199.9 141 66.7
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.7e-49 199.5 136 71.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 4.8e-49 198.0 132 68.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 6.3e-49 197.6 138 69.6
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.3e-49 197.6 138 70.3
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-48 196.8 127 70.1
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-48 196.8 127 70.1
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.8e-48 196.1 135 68.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.8e-48 196.1 138 68.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.4e-48 195.7 134 67.9
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 4.1e-48 194.9 136 66.9
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 5.3e-48 194.5 134 67.2
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 5.3e-48 194.5 134 67.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 7.0e-48 194.1 136 66.9
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 9.1e-48 193.7 136 67.6
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.6e-47 193.0 134 66.4
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.6e-47 192.2 135 65.9
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 7.7e-47 190.7 134 68.7
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.0e-46 190.3 124 74.2
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.0e-46 190.3 124 74.2
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.2e-46 189.1 106 80.2
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 3.8e-46 188.3 134 67.2
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 5.0e-46 188.0 138 65.2
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.5e-46 187.6 137 65.0
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 6.5e-46 187.6 137 64.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 6.5e-46 187.6 124 73.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 8.5e-46 187.2 134 65.7
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.5e-45 186.4 138 65.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.2e-45 185.3 137 64.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 5.5e-45 184.5 137 64.2
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.1e-44 182.6 136 62.5
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 4.7e-44 181.4 137 63.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 4.7e-44 181.4 136 65.4
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 8.0e-44 180.6 137 62.8
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.4e-43 179.9 136 64.0
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.0e-43 178.7 138 59.4
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 5.2e-43 177.9 127 66.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.5e-42 176.4 141 60.3
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.0e-42 176.0 132 62.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.2e-41 172.6 111 72.1
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 8.3e-41 170.6 140 58.6
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.4e-40 169.9 116 69.8
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 9.1e-40 167.2 119 67.2
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 4.5e-39 164.9 137 61.3
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.3e-38 163.3 138 58.0
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 5.0e-38 161.4 109 67.9
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 4.0e-35 151.8 95 73.7
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.4e-34 148.3 121 57.0
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.2e-33 146.0 123 56.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.3e-33 144.4 111 63.1
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 8.3e-33 144.1 122 54.9
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.1e-32 143.7 92 71.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.4e-32 142.5 125 51.2
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.6e-31 139.8 116 53.4
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.0e-31 139.4 119 54.6
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 3.8e-30 135.2 103 61.2
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.5e-29 133.3 86 72.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.2e-28 130.2 82 68.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 3.0e-27 125.6 84 69.0
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 2.2e-25 119.4 122 47.5
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.3e-21 105.1 90 57.8
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.7e-15 85.9 87 55.2
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.9e-14 82.0 53 67.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.7e-06 56.6 48 58.3


User provided reference genes

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