Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03222_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.1e-78 296.6 152 100.0
Ca_07316_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.2e-46 187.6 135 73.3
Ca_20886_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.2e-42 174.1 166 61.4
Ca_07399_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.6e-40 169.1 149 63.8
Ca_26998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.2e-37 160.2 97 79.4
Ca_24132_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.7e-35 150.6 132 62.9
Ca_11825_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-34 149.8 86 83.7
Ca_04411_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.5e-31 137.9 128 60.9
Ca_12413_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.5e-31 137.5 85 80.0
Ca_19794_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.4e-30 134.0 129 55.8
Ca_04892_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-29 131.7 91 67.0
Ca_02430_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.3e-28 129.4 120 60.0
Ca_03376_v3 Cicer arietinum L. HOM05D003499 ORTHO05D004754 5.2e-28 128.3 87 70.1
Ca_07562_v3 Cicer arietinum L. HOM05D003576 ORTHO05D004124 5.2e-28 128.3 126 55.6
Ca_02919_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.0e-27 126.3 132 52.3
Ca_22922_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.0e-27 126.3 126 53.2
Ca_04467_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.8e-26 121.7 103 60.2
Ca_23078_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.1e-25 118.6 74 79.7
Ca_02570_v3 Cicer arietinum L. HOM05D001569 ORTHO05D002183 5.4e-25 118.2 170 42.9
Ca_02438_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.9e-24 114.8 98 59.2
Ca_26486_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.7e-24 114.4 141 49.6
Ca_02693_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-23 112.5 95 63.2
Ca_25773_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.5e-23 110.9 67 79.1
Ca_02442_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.1e-22 110.5 72 75.0
Ca_11515_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-22 109.0 76 71.1
Ca_03682_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 9.5e-22 107.5 63 77.8
Ca_12141_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.1e-21 104.8 63 76.2
Ca_08875_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.8e-20 103.2 67 73.1
Ca_27088_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.8e-20 103.2 67 74.6
Ca_03378_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-18 94.4 67 65.7
Ca_30631_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.3e-18 94.4 67 65.7
Ca_07725_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-17 92.8 81 61.7
Ca_27596_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.8e-16 87.8 59 67.8
Ca_02429_v3 Cicer arietinum L. HOM05D000161 ORTHO05D000111 3.3e-14 82.4 63 60.3
Ca_13827_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.3e-14 81.3 91 52.7
Ca_12453_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.7e-13 78.6 44 86.4
Ca_30374_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 8.0e-13 77.8 51 68.6
Ca_04644_v3 Cicer arietinum L. HOM05D037528 ORTHO05D002183 3.0e-12 75.9 67 59.7
Ca_25437_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.4e-11 72.4 135 37.0
Ca_03817_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 6.4e-10 68.2 79 51.9
Ca_02119_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-09 67.0 37 78.4
Ca_03112_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.4e-09 66.2 37 81.1
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.1e-09 65.5 73 45.2
Ca_03170_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-08 63.9 88 39.8
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-07 60.1 75 45.3
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-07 59.7 74 45.9
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-07 59.3 75 45.3
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-07 58.9 73 45.2
ClCG09G020530 Citrullus lanatus HOM05D000176 ORTHO05D000106 5.0e-07 58.5 71 46.5
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-07 58.5 62 46.8
Lj6g0003148 Lotus japonicus HOM05D061959 ORTHO05D048474 5.0e-07 58.5 51 54.9
MELO3C002881.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.6e-07 58.2 68 47.1
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 6.6e-07 58.2 68 47.1
Sed0026480 Sechium edule HOM05D000176 ORTHO05D000106 6.6e-07 58.2 68 47.1
Ca_14010_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.6e-07 57.8 73 45.2
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 8.6e-07 57.8 72 43.1
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 8.6e-07 57.8 68 45.6
Ca_22715_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.1e-06 57.4 65 40.0
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.4 75 44.0
Ca_06652_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.5e-06 57.0 74 44.6
Lj3A875G59 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 58 48.3
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 75 42.7
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-06 57.0 75 42.7
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.5e-06 57.0 79 43.0
Ca_26213_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.9e-06 56.6 96 33.3
Ca_04586_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.3e-06 55.8 73 42.5
Ca_23731_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.3e-06 55.8 73 43.8
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 3.3e-06 55.8 68 45.6
MD17G1142200 Malus domestica HOM05D000176 ORTHO05D000106 3.3e-06 55.8 68 42.6
TPR.G36336 Trifolium pratense HOM05D000176 ORTHO05D000106 3.3e-06 55.8 65 41.5
Ca_14143_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-06 55.5 66 43.9
Ca_25183_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 4.3e-06 55.5 73 42.5
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 4.3e-06 55.5 68 44.1
PSO675G6629 Papaver somniferum HOM05D000176 ORTHO05D000106 4.3e-06 55.5 85 37.6
QL08p043592 Quercus lobata HOM05D000176 ORTHO05D000106 4.3e-06 55.5 68 44.1
Ca_07670_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 5.6e-06 55.1 73 42.5
Ca_18938_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.6e-06 55.1 81 39.5
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 5.6e-06 55.1 75 41.3
MD09G1156100 Malus domestica HOM05D000176 ORTHO05D000106 5.6e-06 55.1 68 42.6
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 5.6e-06 55.1 54 51.9
Sed0012746 Sechium edule HOM05D000176 ORTHO05D000106 5.6e-06 55.1 68 42.6
Ca_13090_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.3e-06 54.7 91 37.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 7.3e-06 54.7 75 38.7
MD17G1142300 Malus domestica HOM05D000176 ORTHO05D000106 7.3e-06 54.7 68 42.6
Eucgr.A01958 Eucalyptus grandis HOM05D000176 ORTHO05D000106 9.5e-06 54.3 68 44.1
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-06 54.3 63 44.4


User provided reference genes

Program Settings