Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.9e-217 758.8 376 100.0
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.3e-194 682.9 376 90.4
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 9.0e-191 670.2 376 89.9
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.0e-186 656.8 376 87.0
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 3.3e-185 651.7 377 85.4
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.1e-183 646.7 376 84.3
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.5e-182 642.9 376 84.0
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-179 632.5 375 82.9
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.5e-177 626.3 375 82.7
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 3.7e-176 621.7 377 82.2
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.4e-175 619.8 375 81.6
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.8e-175 619.4 374 81.3
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.8e-175 619.4 377 82.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.0e-174 615.9 375 81.3
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 8.5e-173 610.5 347 84.7
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 7.2e-172 607.4 347 85.0
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 2.1e-171 605.9 375 80.3
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.6e-171 605.1 374 79.7
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 3.6e-171 605.1 369 81.0
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 3.6e-171 605.1 375 80.3
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 1.0e-170 603.6 372 78.2
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.4e-170 603.2 347 84.4
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 2.3e-170 602.4 373 79.1
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 2.3e-170 602.4 390 76.9
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.0e-170 602.1 380 78.9
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 3.9e-170 601.7 347 83.6
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 8.8e-170 600.5 361 81.7
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.1e-169 600.1 374 79.1
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.6e-169 599.0 376 77.7
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 4.4e-169 598.2 347 84.1
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 9.7e-169 597.0 347 84.4
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.3e-168 596.7 345 84.1
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 3.7e-168 595.1 327 88.1
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 4.8e-168 594.7 376 77.9
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.3e-168 594.3 347 83.3
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.4e-167 593.2 347 83.6
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 3.1e-167 592.0 348 82.8
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 4.1e-167 591.7 350 81.4
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.3e-167 591.3 347 83.3
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.0e-167 590.9 365 78.4
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.6e-166 589.7 347 83.0
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 4.5e-166 588.2 375 77.3
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.5e-166 588.2 399 74.7
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 5.9e-166 587.8 365 77.8
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 7.7e-166 587.4 363 79.9
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.7e-166 587.4 356 80.6
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.0e-165 587.0 350 81.1
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.0e-165 587.0 351 80.3
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.3e-165 586.6 353 80.2
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.3e-165 586.6 378 77.0
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 2.2e-165 585.9 335 83.9
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.9e-165 585.5 364 77.7
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 5.0e-165 584.7 357 79.8
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 8.5e-165 583.9 350 80.9
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 8.5e-165 583.9 340 82.9
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.5e-164 583.2 347 80.7
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.9e-164 582.8 319 87.8
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.9e-164 582.8 347 81.0
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.5e-164 582.4 335 83.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.2e-164 582.0 365 77.8
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 5.5e-164 581.3 365 78.4
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 5.5e-164 581.3 352 79.8
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 7.2e-164 580.9 365 76.4
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 7.2e-164 580.9 347 79.8
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 9.4e-164 580.5 364 78.3
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.2e-163 580.1 352 79.5
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.6e-163 579.7 335 82.4
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 3.6e-163 578.6 347 79.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.6e-163 578.6 347 81.0
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 3.6e-163 578.6 365 76.4
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 8.0e-163 577.4 358 77.9
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.4e-162 576.6 375 77.3
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.4e-162 576.6 368 76.1
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.0e-162 575.5 373 77.2
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 5.2e-162 574.7 358 77.7
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 5.2e-162 574.7 363 76.9
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 6.8e-162 574.3 334 80.8
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 6.8e-162 574.3 365 77.3
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 1.2e-161 573.5 375 74.4
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 2.0e-161 572.8 334 81.1
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.4e-161 571.6 366 75.7
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 7.5e-161 570.9 357 77.9
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 7.5e-161 570.9 359 77.4
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.3e-160 570.1 358 76.8
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.7e-160 569.7 361 75.9
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 3.7e-160 568.5 362 76.2
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.1e-159 567.0 428 69.2
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 1.4e-159 566.6 381 75.1
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.4e-159 565.8 375 73.9
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 1.6e-158 563.1 347 78.1
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.6e-158 563.1 360 74.2
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.5e-158 562.0 375 73.3
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.1e-156 557.0 376 71.5
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.2e-156 555.4 354 74.0
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 5.5e-156 554.7 360 74.2
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 6.3e-152 541.2 358 73.5
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 3.0e-146 522.3 335 75.8
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 4.0e-146 521.9 335 75.8
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 2.4e-143 512.7 362 69.1
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 8.6e-141 504.2 335 70.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 3.6e-139 498.8 358 68.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 3.1e-138 495.7 375 68.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 5.2e-138 495.0 330 73.0
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.2e-137 493.8 375 69.1
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 4.9e-136 488.4 333 69.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 8.3e-136 487.6 342 73.1
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.4e-127 460.3 375 64.5
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.8e-123 446.0 259 86.9
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 9.2e-119 431.0 329 62.0
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.1e-116 424.1 366 60.7
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 5.2e-114 415.2 376 56.9
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.5e-113 413.7 266 78.6
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.4e-111 407.1 241 83.0
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.2e-105 387.5 328 56.4
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 9.9e-105 384.4 260 73.5
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 6.0e-102 375.2 250 72.8
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.1e-101 372.1 327 57.2
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.1e-98 362.8 369 50.4
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.8e-69 267.3 192 70.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 3.0e-69 266.5 287 46.3
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.2e-62 244.6 160 73.1
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 8.2e-59 231.9 170 65.9
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.8e-48 196.4 131 74.0
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 3.0e-45 186.8 155 61.3
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 2.5e-15 87.4 68 66.2
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.4e-13 81.6 90 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.4e-13 81.6 90 48.9
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 9.2e-10 68.9 35 85.7


User provided reference genes

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