Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03065_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.7e-112 408.7 207 100.0
Ca_02333_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.6e-17 92.0 176 35.8
Ca_06059_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.6e-17 92.0 165 35.8
Ca_11705_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.3e-17 91.7 225 31.1
Ca_19739_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 2.8e-16 89.7 161 37.3
Ca_28064_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.9e-14 81.3 145 36.6
Ca_11646_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.1e-12 77.8 162 32.7
Ca_23665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.6e-11 73.9 233 28.8
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 2.1e-11 73.6 178 30.3
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-11 72.8 187 28.3
Ca_24322_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.8e-11 71.6 172 30.8
Ca_14263_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.3e-10 70.9 198 30.8
Ca_05465_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.1e-10 68.9 142 33.8
QL01p003494 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-10 68.9 159 31.4
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 5.1e-10 68.9 173 31.2
Ca_06967_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-10 68.2 162 30.9
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-09 67.4 164 31.7
PSO541G3919 Papaver somniferum HOM05D000002 ORTHO05D000001 1.5e-09 67.4 160 29.4
QL09p034601 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-09 67.4 160 31.9
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-09 67.4 225 26.2
CSS0027562 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-09 66.6 162 29.6
Ca_04987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.5e-09 66.6 223 28.3
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-09 66.2 193 29.5
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-09 66.2 173 30.1
RcHm_v2.0_Chr7g0198271 Rosa chinensis HOM05D000002 ORTHO05D000001 3.3e-09 66.2 176 29.0
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 5.6e-09 65.5 181 29.3
Ca_12101_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.3e-09 65.1 186 33.3
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 7.3e-09 65.1 181 29.3
Nn6g34150 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.3e-09 65.1 172 30.8
Ca_06739_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.6e-09 64.7 119 38.7
Ca_15813_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.6e-09 64.7 196 30.1
CSS0002225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.3 158 29.1
ECA233G1773 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-08 64.3 174 24.7
PSO824G0022 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-08 64.3 81 40.7
HanXRQChr06g0173631 Helianthus annuus HOM05D000002 ORTHO05D000001 2.1e-08 63.5 164 29.3
PSO210G3819 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-08 63.5 155 31.0
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-08 63.5 81 40.7
SHI20402 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-08 63.2 161 29.8
PSO017G5132 Papaver somniferum HOM05D000002 ORTHO05D000001 3.6e-08 62.8 81 40.7
QL11p047249 Quercus lobata HOM05D000002 ORTHO05D000001 3.6e-08 62.8 175 29.1
SHI47831 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-08 62.8 158 31.6
SHI48104 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-08 62.8 158 31.6
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 4.7e-08 62.4 81 39.5
Ca_02902_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-08 62.0 114 37.7
ECA248G1474 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-08 62.0 195 26.7
Nn1g02200 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.2e-08 62.0 179 29.1
VMungo0331G1422 Vigna mungo HOM05D003553 ORTHO05D005072 6.2e-08 62.0 85 44.7
Ca_02351_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.1e-08 61.6 179 27.9
PSO384G4495 Papaver somniferum HOM05D000002 ORTHO05D000001 8.1e-08 61.6 81 39.5
Ca_07548_v3 Cicer arietinum L. HOM05D000002 ORTHO05D148597 1.1e-07 61.2 63 49.2
RcHm_v2.0_Chr5g0064041 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-07 61.2 205 27.3
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.8 178 28.7
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-07 60.8 177 28.8
MELO3C029502.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.8e-07 60.5 150 30.0
FvH4_5g12471 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-07 60.5 206 25.7
SHI46706 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 60.5 161 29.2
CSS0015467 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 60.1 159 29.6
AUR62031847 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.4e-07 60.1 179 29.1
Nn7g37206 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 60.1 175 28.6
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-07 60.1 208 28.4
TWI56G1078 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.4e-07 60.1 163 31.9
SHI04709 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 59.7 159 29.6
Ca_06069_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.0e-07 59.3 214 26.6
HanXRQChr14g0436351 Helianthus annuus HOM05D000002 ORTHO05D000001 4.0e-07 59.3 159 28.9
Nn1g09172 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-07 59.3 170 29.4
Nn4g25618 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.0e-07 59.3 173 28.9
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 4.0e-07 59.3 113 34.5
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-07 59.3 183 30.6
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 5.3e-07 58.9 79 40.5
Ca_23033_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.3e-07 58.9 97 41.2
ECA234G4446 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-07 58.9 174 24.7
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.3e-07 58.9 170 30.0
PSO832G0380 Papaver somniferum HOM05D000002 ORTHO05D000001 5.3e-07 58.9 81 38.3
SHI06982 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-07 58.9 181 28.7
SHI26423 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-07 58.9 169 30.2
SHI37367 Sapria himalayana HOM05D000002 ORTHO05D000080 5.3e-07 58.9 159 28.9
Ca_05379_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.9e-07 58.5 168 28.6
Hma1.2p1_0176F.1_g077340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.9e-07 58.5 158 29.1
PSO017G6458 Papaver somniferum HOM05D000002 ORTHO05D000001 6.9e-07 58.5 112 33.0
SHI10450 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-07 58.5 160 29.4
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 9.0e-07 58.2 75 42.7
MSTRG.4741 Avicennia marina HOM05D000002 ORTHO05D000001 9.0e-07 58.2 75 42.7
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-07 58.2 176 29.0
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 9.0e-07 58.2 183 26.8
Hma1.2p1_0184F.1_g081330 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.0e-07 58.2 158 30.4
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 9.0e-07 58.2 177 30.5
SHI07537 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-07 58.2 174 29.9
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-07 58.2 209 27.8
PSO210G4968 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-06 57.8 112 33.9
PSO832G1114 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-06 57.8 213 26.8
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.8 177 30.5
SHI12729 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 57.8 159 28.9
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.2e-06 57.8 167 28.7
Ca_11778_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 1.5e-06 57.4 239 26.4
Ca_13896_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-06 57.4 117 38.5
Ca_27230_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-06 57.4 164 27.4
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 57.4 182 25.3
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-06 57.4 179 26.8
SHI51559 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.4 161 28.6
CSS0014778 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 57.0 171 27.5
Ca_13725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-06 57.0 230 28.3
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.0e-06 57.0 177 28.8
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-06 57.0 197 27.9
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-06 57.0 197 27.9
PSO339G0194 Papaver somniferum HOM05D000002 ORTHO05D000001 2.0e-06 57.0 155 30.3
SHI07833 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-06 57.0 160 29.4
SHI51650 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 57.0 166 30.1
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 57.0 207 27.1
Cpa.g.c38256 Carica papaya HOM05D000002 ORTHO05D000001 2.6e-06 56.6 72 41.7
Cpa.g.c40431 Carica papaya HOM05D000002 ORTHO05D000001 2.6e-06 56.6 72 41.7
ECA234G3983 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-06 56.6 176 28.4
Hma1.2p1_0775F.1_g216430 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-06 56.6 81 39.5
PSO190G0003 Papaver somniferum HOM05D000002 ORTHO05D000001 2.6e-06 56.6 81 37.0
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.6 206 27.2
Sopen03g020180 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.6 241 23.7
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.6 206 27.2
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 56.6 206 27.2
MSTRG.22493 Avicennia marina HOM05D000002 ORTHO05D000001 3.4e-06 56.2 79 39.2
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-06 56.2 168 26.2
Ca_03736_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-06 56.2 170 27.1
Ca_14649_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-06 56.2 124 33.9
Ca_26986_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.4e-06 56.2 78 42.3
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 3.4e-06 56.2 170 27.6
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.4e-06 56.2 196 29.1
SHI20633 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-06 56.2 160 28.8
THA.LOC104820470 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.4e-06 56.2 84 35.7
CSS0015876 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 55.8 175 27.4
CSS0040283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 55.8 185 28.6
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-06 55.8 79 41.8
Ca_17123_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.4e-06 55.8 264 27.3
PSO063G3813 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 55.8 111 35.1
PSO229G0043 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 55.8 160 27.5
PSO675G4440 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 55.8 115 32.2
SHI10925 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 55.8 164 28.7
SHI13256 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 55.8 169 29.0
SHI44982 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 55.8 161 28.0
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.8 209 25.8
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.8 209 25.8
Sopen10g024510 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.8 81 38.3
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.8 209 25.8
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 55.8 209 25.8
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-06 55.5 79 41.8
CSS0046044 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.8e-06 55.5 162 27.8
ECA236G1983 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 55.5 160 30.6
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 55.5 181 28.2
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 55.5 204 25.0
FvH4_7g29024 Fragaria vesca HOM05D000002 ORTHO05D000001 5.8e-06 55.5 201 25.9
PSO339G0080 Papaver somniferum HOM05D000002 ORTHO05D000001 5.8e-06 55.5 113 34.5
SHI21012 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-06 55.5 180 27.8
Sopen12g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-06 55.5 165 27.9
CSS0000424 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-06 55.1 168 29.2
CSS0027637 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.6e-06 55.1 171 26.9
CAN.G906.1 Capsicum annuum HOM05D000002 ORTHO05D000001 7.6e-06 55.1 138 33.3
Ca_12427_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.6e-06 55.1 150 27.3
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-06 55.1 192 27.6
PSO339G2587 Papaver somniferum HOM05D000002 ORTHO05D000001 7.6e-06 55.1 179 27.9
SHI10564 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 55.1 162 27.8
SHI28470 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 55.1 167 28.1
SHI29707 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-06 55.1 167 29.9
TWI32G0787 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.6e-06 55.1 87 37.9
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-06 54.7 68 41.2
Ca_05406_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.9e-06 54.7 71 40.8
FvH4_3g21021 Fragaria vesca HOM05D000002 ORTHO05D000001 9.9e-06 54.7 82 37.8
SHI50018 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-06 54.7 169 28.4
SHI50319 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-06 54.7 169 28.4


User provided reference genes

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