Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 0.0e+00 1415.2 753 100.0
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.4e-246 856.7 996 53.8
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 1.1e-243 847.0 878 58.1
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 7.0e-227 791.2 1058 49.5
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 3.9e-169 599.4 767 50.5
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 7.9e-154 548.5 877 44.4
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 3.9e-153 546.2 768 47.8
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.1e-150 536.2 837 43.8
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 7.0e-150 535.4 844 45.3
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.2e-146 524.6 763 45.3
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 6.3e-143 512.3 796 43.5
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.0e-137 495.0 828 42.6
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 8.6e-116 422.2 778 39.8
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 6.9e-73 279.6 832 32.8
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 6.4e-71 273.1 833 32.1
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.4e-70 271.9 816 31.4
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 6.2e-66 256.5 776 33.1
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 6.5e-63 246.5 803 32.6
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 3.5e-61 240.7 825 30.9
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 8.7e-60 236.1 812 29.9
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.9e-59 235.0 904 29.2
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 5.7e-59 233.4 901 28.5
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.8e-57 228.4 796 30.9
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 3.1e-57 227.6 803 30.9
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.5e-56 225.3 808 30.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.0e-56 224.9 818 31.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.2e-55 221.5 761 30.2
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.8e-55 220.7 804 29.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.0e-55 220.3 854 29.4
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.4e-54 218.8 849 29.3
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.5e-54 218.0 808 29.7
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 4.2e-54 217.2 818 29.3
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 4.2e-54 217.2 902 27.7
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.6e-53 215.3 786 29.0
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.0e-52 212.6 849 29.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 3.3e-51 207.6 821 28.7
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.4e-49 202.2 804 26.9
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 5.3e-49 200.3 835 29.7
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 5.3e-49 200.3 809 29.5
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.5e-48 198.7 853 27.1
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 1.0e-47 196.1 799 28.3
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.8e-47 194.1 783 28.0
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 6.5e-47 193.4 408 37.7
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 6.5e-47 193.4 798 28.1
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 4.2e-46 190.7 783 28.9
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 4.7e-45 187.2 914 28.8
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 7.9e-45 186.4 789 27.6
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 2.3e-44 184.9 801 27.0
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 3.0e-44 184.5 476 34.2
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 8.8e-44 183.0 847 26.7
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 8.8e-44 183.0 847 27.3
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 8.8e-44 183.0 827 28.8
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.6e-43 181.4 376 36.7
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 3.3e-43 181.0 264 45.8
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 1.3e-42 179.1 513 32.4
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.1e-41 176.0 863 27.0
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.5e-40 172.2 375 35.7
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 2.0e-40 171.8 768 27.2
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.6e-40 171.4 827 29.0
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 3.4e-40 171.0 852 26.8
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.2e-39 168.3 274 42.3
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 5.0e-39 167.2 761 29.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 6.5e-39 166.8 314 37.9
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.1e-38 166.0 205 50.7
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 3.6e-37 161.0 803 26.7
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 6.1e-37 160.2 326 36.8
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 3.9e-36 157.5 779 27.5
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 5.2e-36 157.1 820 25.2
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 8.8e-36 156.4 797 26.2
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.6e-35 154.8 780 24.6
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 5.7e-35 153.7 895 25.8
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.3e-34 152.5 303 39.3
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 3.7e-34 151.0 801 26.8
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 6.3e-34 150.2 788 24.4
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.8e-33 148.7 229 43.2
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 3.1e-33 147.9 830 25.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 5.3e-33 147.1 855 25.7
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.2e-32 146.0 228 40.4
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.2e-32 146.0 325 36.0
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 4.5e-32 144.1 316 34.8
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.7e-31 142.1 850 25.5
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.7e-31 142.1 850 25.5
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.9e-31 141.4 230 40.0
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.9e-31 141.4 882 25.6
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 5.0e-31 140.6 883 25.6
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.9e-30 138.7 805 25.1
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 4.2e-30 137.5 833 25.0
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 4.2e-30 137.5 833 25.0
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 4.2e-30 137.5 393 31.3
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 1.6e-29 135.6 179 43.0
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.1e-29 135.2 232 39.7
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 3.6e-29 134.4 805 26.5
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 4.7e-29 134.0 853 24.3
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 8.0e-29 133.3 384 32.3
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 8.8e-28 129.8 767 25.0
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 2.0e-27 128.6 272 36.8
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 9.7e-27 126.3 773 25.6
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.7e-26 125.6 868 25.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.8e-26 124.8 941 24.1
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.8e-26 124.0 181 43.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 6.3e-26 123.6 272 34.2
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 8.2e-26 123.2 256 39.1
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 2.4e-25 121.7 301 33.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 7.0e-25 120.2 279 35.1
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 9.1e-25 119.8 393 30.0
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.9e-22 112.1 255 34.1
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.2e-22 111.3 238 35.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.1e-21 108.6 167 41.3
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 8.0e-21 106.7 746 23.9
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.0e-20 106.3 242 36.0
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.4e-20 105.9 174 37.9
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.4e-19 101.3 250 33.6
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.2e-16 92.8 298 30.2
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.2e-16 92.8 284 34.5
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 5.0e-15 87.4 225 32.4
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.6e-15 86.7 674 27.0
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.5e-14 85.9 184 34.2
TPR.G14103 Trifolium pratense HOM05D000254 ORTHO05D000165 2.8e-10 71.6 41 80.5
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.5e-08 64.3 138 36.2
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.7e-07 62.4 150 32.0
THA.LOC104803300 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 3.3e-06 58.2 202 34.2


User provided reference genes

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