Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 3.9e-125 451.4 220 100.0
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 8.9e-114 413.7 221 91.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 4.1e-111 404.8 224 88.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 5.4e-111 404.4 221 90.0
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 7.8e-102 374.0 226 81.4
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.9e-96 355.5 222 81.1
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.4e-95 352.4 222 80.2
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 3.0e-93 345.5 225 76.9
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 6.6e-93 344.4 222 81.1
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.1e-92 343.6 222 78.8
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.2e-88 329.3 216 78.2
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.2e-88 329.3 216 78.2
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.8e-77 293.1 227 66.5
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 6.7e-77 291.2 228 64.9
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 1.5e-76 290.0 221 67.4
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 4.3e-76 288.5 225 64.9
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.4e-74 283.5 226 65.9
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.8e-74 283.1 221 65.6
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.8e-74 283.1 221 65.6
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.8e-74 283.1 225 66.2
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.1e-74 282.3 221 66.1
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 6.9e-74 281.2 229 63.3
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 1.2e-73 280.4 225 65.8
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.4e-73 278.9 227 63.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 7.6e-73 277.7 225 65.3
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 2.9e-72 275.8 226 63.3
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 3.8e-72 275.4 229 62.9
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.4e-71 273.5 227 62.6
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 1.9e-71 273.1 228 62.3
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.5e-71 272.7 225 64.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.2e-71 272.3 222 65.8
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 4.2e-71 271.9 226 65.0
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 9.3e-71 270.8 228 61.8
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 3.6e-70 268.9 227 63.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 3.6e-70 268.9 232 63.4
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.0e-69 267.3 232 62.9
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 3.0e-69 265.8 226 64.2
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.9e-68 263.1 235 62.6
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.3e-67 260.4 221 63.8
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.3e-67 260.4 227 61.7
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.4e-66 256.1 229 59.8
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 4.1e-66 255.4 222 61.7
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 6.9e-66 254.6 226 64.2
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 9.0e-66 254.2 186 69.9
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.0e-65 253.1 186 69.4
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.6e-65 252.7 186 71.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 7.7e-65 251.1 186 71.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.0e-64 250.8 186 69.9
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.3e-64 250.4 225 64.0
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.3e-64 250.4 186 70.4
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 2.2e-64 249.6 226 62.4
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 2.2e-64 249.6 226 62.4
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 2.2e-64 249.6 226 62.4
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 2.2e-64 249.6 186 67.7
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.9e-64 249.2 173 73.4
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 2.9e-64 249.2 233 59.2
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 6.5e-64 248.1 223 63.2
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 8.5e-64 247.7 225 62.2
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 8.5e-64 247.7 161 77.0
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.1e-63 247.3 220 60.9
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.9e-63 246.5 229 59.8
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.9e-63 246.5 225 61.8
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 5.5e-63 245.0 228 59.6
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.2e-62 243.8 156 78.8
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.6e-62 241.9 201 64.7
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 7.9e-62 241.1 232 59.5
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.3e-61 239.6 161 74.5
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 3.0e-61 239.2 200 64.0
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 6.7e-61 238.0 211 61.1
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 8.8e-61 237.7 206 60.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 2.0e-60 236.5 164 74.4
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.6e-60 236.1 187 64.7
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 3.3e-60 235.7 190 65.8
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 5.7e-60 235.0 130 86.9
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.7e-59 233.4 224 59.8
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.7e-59 233.4 224 59.8
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 1.4e-58 230.3 214 61.2
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 3.1e-58 229.2 200 62.5
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 6.9e-58 228.0 129 83.7
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.5e-57 226.9 228 55.7
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.0e-57 226.5 131 82.4
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 4.5e-57 225.3 219 58.9
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 5.9e-57 224.9 168 70.8
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 2.7e-54 216.1 150 73.3
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 4.7e-54 215.3 126 80.2
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 6.7e-53 211.5 168 63.7
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.3e-51 207.2 214 57.0
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 8.2e-51 204.5 177 60.5
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.4e-50 203.8 143 71.3
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.8e-50 203.4 156 64.1
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 9.1e-50 201.1 169 58.6
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.2e-49 200.7 125 77.6
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 5.9e-49 198.4 138 74.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.2e-47 192.6 139 70.5
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 3.6e-46 189.1 202 51.0
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.8e-43 178.7 165 59.4
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.3e-40 170.6 227 45.8
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.1e-39 167.5 223 46.6
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 4.8e-35 152.1 122 58.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.7e-32 143.7 139 57.6
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 8.5e-32 141.4 171 49.7
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 7.8e-25 118.2 156 50.0
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 9.5e-23 111.3 56 92.9
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 4.7e-22 109.0 84 70.2
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 2.4e-18 96.7 61 73.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 4.6e-17 92.4 141 37.6
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 6.6e-16 88.6 67 65.7
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.5e-12 77.4 113 37.2
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 3.7e-11 72.8 45 82.2
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 3.2e-10 69.7 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 3.5e-09 66.2 101 35.6


User provided reference genes

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