Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03029_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 1.8e-33 145.2 66 100.0
TPR.G32324 Trifolium pratense HOM05D003598 ORTHO05D004198 4.9e-15 84.0 38 97.4
MSTRG.1768 Avicennia marina HOM05D003598 ORTHO05D004198 6.3e-15 83.6 38 97.4
Oeu042207.1 Olea europaea HOM05D003598 ORTHO05D004198 6.3e-15 83.6 38 97.4
Medtr4g074480 Medicago truncatula HOM05D003598 ORTHO05D004198 1.1e-14 82.8 38 97.4
Ca_03027_v3 Cicer arietinum L. HOM05D003598 ORTHO05D004198 1.4e-14 82.4 38 97.4
CsaV3_3G031510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 1.8e-14 82.0 38 94.7
Migut.E01352 Erythranthe guttata HOM05D003598 ORTHO05D004198 1.8e-14 82.0 38 94.7
Glyma.12G141400 Glycine max HOM05D003598 ORTHO05D004198 2.4e-14 81.6 38 94.7
Lj6A721G58 Lonicera japonica HOM05D003598 ORTHO05D004198 2.4e-14 81.6 38 94.7
Phvul.L003737 Phaseolus vulgaris HOM05D003598 ORTHO05D004198 2.4e-14 81.6 38 94.7
Cfa013868 Carpinus fangiana HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
CiPaw.08G060100 Carya illinoinensis HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
MELO3C024034.2 Cucumis melo HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Gohir.A11G124700 Gossypium hirsutum HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Gohir.D08G204800 Gossypium hirsutum HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Gohir.D11G129900 Gossypium hirsutum HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Gorai.007G139000 Gossypium raimondii HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Lj3g0003654 Lotus japonicus HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 89.5
Manes.01G073300 Manihot esculenta HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
Rhsim04G0081000 Rhododendron simsii HOM05D003598 ORTHO05D004198 7.0e-14 80.1 38 92.1
CANSAT64G1690 Cannabis sativa HOM05D003598 ORTHO05D004198 9.2e-14 79.7 38 92.1
Cc00_g17080 Coffea canephora HOM05D003598 ORTHO05D004198 9.2e-14 79.7 38 94.7
Cc08_g05000 Coffea canephora HOM05D003598 ORTHO05D004198 9.2e-14 79.7 38 94.7
VMungo1127G1291 Vigna mungo HOM05D003598 ORTHO05D004198 9.2e-14 79.7 38 92.1
CAN.G1425.3 Capsicum annuum HOM05D003598 ORTHO05D004198 1.2e-13 79.3 38 92.1
Nitab4.5_0001659g0130 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.2e-13 79.3 38 92.1
Nitab4.5_0002941g0020 Nicotiana tabacum HOM05D003598 ORTHO05D004198 1.2e-13 79.3 38 92.1
Peaxi162Scf00193g00013 Petunia axillaris HOM05D003598 ORTHO05D004198 1.2e-13 79.3 38 92.1
arahy.Tifrunner.gnm1.ann1.01A9SY Arachis hypogaea HOM05D003598 ORTHO05D004198 1.6e-13 79.0 38 89.5
arahy.Tifrunner.gnm1.ann1.Y4R7AD Arachis hypogaea HOM05D003598 ORTHO05D004198 1.6e-13 79.0 38 89.5
Gorai.004G216900 Gossypium raimondii HOM05D003598 ORTHO05D004198 1.6e-13 79.0 38 89.5
vmacro09196 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 1.6e-13 79.0 38 89.5
Aqoxy2G02255 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
CiPaw.07G157700 Carya illinoinensis HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
Duzib133G1064 Durio zibethinus HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
Glyma.U018351 Glycine max HOM05D003598 ORTHO05D004198 2.0e-13 78.6 37 94.6
SalBow8G4212 Salvia bowleyana HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
Thecc.01G274200 Theobroma cacao HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
TWI77G0411 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 2.0e-13 78.6 38 89.5
DCAR_002566 Daucus carota HOM05D003598 ORTHO05D004198 2.7e-13 78.2 38 89.5
ECA240G3477 Erigeron canadensis HOM05D003598 ORTHO05D004198 2.7e-13 78.2 38 89.5
Gohir.A08G186600 Gossypium hirsutum HOM05D003598 ORTHO05D004198 2.7e-13 78.2 38 89.5
QL02p009504 Quercus lobata HOM05D003598 ORTHO05D004198 2.7e-13 78.2 37 89.2
Ah.01g012930 Amaranthus hybridus HOM05D003598 ORTHO05D004198 4.5e-13 77.4 38 89.5
AUR62000767 Chenopodium quinoa HOM05D003598 ORTHO05D004198 4.5e-13 77.4 38 89.5
Cc08_g04900 Coffea canephora HOM05D003598 ORTHO05D004198 4.5e-13 77.4 38 92.1
Dinv32105 Davidia involucrata HOM05D003598 ORTHO05D004198 4.5e-13 77.4 38 89.5
Lalb_Chr03g0024851 Lupinus albus HOM05D003598 ORTHO05D004198 4.5e-13 77.4 38 89.5
DCAR_030401 Daucus carota HOM05D003598 ORTHO05D004198 5.9e-13 77.0 38 86.8
PGSC0003DMG400030870 Solanum tuberosum HOM05D003598 ORTHO05D004198 5.9e-13 77.0 38 89.5
TWI53G1744 Tripterygium wilfordii HOM05D003598 ORTHO05D004198 5.9e-13 77.0 38 86.8
unitig_899.g14735 Utricularia gibba HOM05D003598 ORTHO05D004198 5.9e-13 77.0 38 86.8
Ah.01g001620 Amaranthus hybridus HOM05D003598 ORTHO05D004198 7.8e-13 76.6 38 89.5
Cpa.g.sc51.45 Carica papaya HOM05D003598 ORTHO05D004198 7.8e-13 76.6 38 89.5
Duzib138G0618 Durio zibethinus HOM05D003598 ORTHO05D004198 7.8e-13 76.6 38 86.8
HanXRQChr03g0086691 Helianthus annuus HOM05D003598 ORTHO05D004198 7.8e-13 76.6 38 86.8
Psat7g173800 Pisum sativum HOM05D003598 ORTHO05D004198 7.8e-13 76.6 38 86.8
CSS0049191 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 84.2
AUR62015205 Chenopodium quinoa HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 86.8
Rhsim06G0126100 Rhododendron simsii HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 84.2
Sed0014776 Sechium edule HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 86.8
Sed0024830 Sechium edule HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 86.8
vmacro12412 Vaccinium macrocarpon HOM05D003598 ORTHO05D004198 1.0e-12 76.3 38 84.2
Atru.chr9.2066 Acer truncatum HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 84.2
HanXRQChr17g0533671 Helianthus annuus HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 86.8
Hma1.2p1_0218F.1_g092550 Hydrangea macrophylla HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 84.2
Hund03395 Selenicereus undatus HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 86.8
GSVIVG01010181001 Vitis vinifera HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 84.2
Zm00001eb066420 Zea mays HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 86.8
Zm00001eb066470 Zea mays HOM05D003598 ORTHO05D004198 1.3e-12 75.9 38 86.8
Aa31LG11G11250 Aethionema arabicum HOM05D003598 ORTHO05D004198 1.7e-12 75.5 38 84.2
PGSC0003DMG400005723 Solanum tuberosum HOM05D003598 ORTHO05D004198 1.7e-12 75.5 38 86.8
ATR0618G278 Amborella trichopoda HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 81.6
Aqoxy3G01046 Aquilegia oxysepala HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 86.8
AT5G18400 Arabidopsis thaliana HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 86.8
Sp6g25920 Schrenkiella parvula HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 86.8
THA.LOC104802853 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 86.8
THA.LOC104820751 Tarenaya hassleriana HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 86.8
TAR629G0796 Trochodendron aralioides HOM05D003598 ORTHO05D004198 2.3e-12 75.1 38 84.2
Ciclev10032368m.g Citrus clementina HOM05D003598 ORTHO05D004198 2.9e-12 74.7 38 84.2
MBI03_g24013_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 2.9e-12 74.7 38 84.2
FvH4_4g36731 Fragaria vesca HOM05D003598 ORTHO05D004198 3.9e-12 74.3 38 86.8
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 3.9e-12 74.3 38 86.8
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 3.9e-12 74.3 38 86.8
Os04g0682050 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 3.9e-12 74.3 38 81.6
Actinidia11173 Actinidia chinensis HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
Actinidia24398 Actinidia chinensis HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
COL.COLO4_11873 Corchorus olitorius HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
Os04g0674400 Oryza sativa ssp. japonica HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 81.6
Potri.005G198900 Populus trichocarpa HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
PGR042G0762 Punica granatum HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
Sabra02G0050100 Salix brachista HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 86.8
Sabra05G0151500 Salix brachista HOM05D003598 ORTHO05D004198 5.0e-12 73.9 38 84.2
AL6G29630 Arabidopsis lyrata HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Carub.0006s1666 Capsella rubella HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
CARHR194630 Cardamine hirsuta HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Thhalv10015717m.g Eutrema salsugineum HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Prupe.1G345400 Prunus persica HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Solyc03g119420.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Solyc08g075730.3 Solanum lycopersicum HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Sopen03g038270 Solanum pennellii HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
Sopen08g024380 Solanum pennellii HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 84.2
TAR371G1198 Trochodendron aralioides HOM05D003598 ORTHO05D004198 6.6e-12 73.6 38 81.6
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 8.6e-12 73.2 38 84.2
BolC3t13511H Brassica oleracea HOM05D003598 ORTHO05D004198 8.6e-12 73.2 38 84.2
BraA03t10207Z Brassica rapa HOM05D003598 ORTHO05D004198 8.6e-12 73.2 38 84.2
AUR62017668 Chenopodium quinoa HOM05D003598 ORTHO05D004198 8.6e-12 73.2 38 81.6
RcHm_v2.0_Chr4g0446451 Rosa chinensis HOM05D003598 ORTHO05D004198 8.6e-12 73.2 38 84.2
COL.COLO4_09060 Corchorus olitorius HOM05D003598 ORTHO05D004198 1.1e-11 72.8 38 81.6
Lsat_1_v5_gn_3_7261 Lactuca sativa HOM05D003598 ORTHO05D004198 1.1e-11 72.8 38 81.6
PSO063G0008 Papaver somniferum HOM05D003598 ORTHO05D004198 1.1e-11 72.8 38 78.9
PSO782G0946 Papaver somniferum HOM05D003598 ORTHO05D004198 1.1e-11 72.8 38 78.9
BolC9t58693H Brassica oleracea HOM05D003598 ORTHO05D004198 1.5e-11 72.4 38 84.2
Potri.002G062200 Populus trichocarpa HOM05D003598 ORTHO05D004198 1.5e-11 72.4 38 84.2
MD13G1007600 Malus domestica HOM05D003598 ORTHO05D004198 1.9e-11 72.0 38 81.6
MD16G1000500 Malus domestica HOM05D003598 ORTHO05D004198 1.9e-11 72.0 38 81.6
Prupe.8G036300 Prunus persica HOM05D003598 ORTHO05D004198 1.9e-11 72.0 38 84.2
SMO367G0289 Selaginella moellendorffii HOM05D003598 ORTHO05D004198 1.9e-11 72.0 38 76.3
Carub.0008s0217 Capsella rubella HOM05D003598 ORTHO05D004198 4.3e-11 70.9 38 81.6
SEGI_19284 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 5.6e-11 70.5 38 76.3
SEGI_32675 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 5.6e-11 70.5 38 76.3
HPP92_009730 Vanilla planifolia HOM05D003598 ORTHO05D004198 5.6e-11 70.5 38 78.9
Nn4g24926 Nelumbo nucifera HOM05D003598 ORTHO05D004198 9.5e-11 69.7 38 78.9
CDE02G3181 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.6e-10 68.9 38 73.7
Nn6g34923 Nelumbo nucifera HOM05D003598 ORTHO05D004198 2.8e-10 68.2 38 78.9
CDE04G2679 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 4.7e-10 67.4 38 71.1
Mapoly0032s0120 Marchantia polymorpha HOM05D003598 ORTHO05D004198 4.7e-10 67.4 38 68.4
Pp3c13_7070 Physcomitrium patens HOM05D003598 ORTHO05D004198 8.0e-10 66.6 36 69.4
AagrBONN_evm.TU.Sc2ySwM_368.147 Anthoceros agrestis HOM05D003598 ORTHO05D004198 1.0e-09 66.2 38 65.8
CDE05G1904 Ceratophyllum demersum HOM05D003598 ORTHO05D004198 1.0e-09 66.2 34 76.5
BcaNung04934 Brassica carinata HOM05D003598 ORTHO05D004198 2.3e-09 65.1 47 68.1
SEGI_23700 Sequoiadendron giganteum HOM05D003598 ORTHO05D004198 2.3e-09 65.1 38 73.7
Cre11.g475350 Chlamydomonas reinhardtii HOM05D003598 ORTHO05D004198 5.2e-09 63.9 38 68.4
Pp3c8_19850 Physcomitrium patens HOM05D003598 ORTHO05D004198 5.2e-09 63.9 36 66.7
Glyma.11G103000 Glycine max HOM05D003598 ORTHO05D004198 2.6e-08 61.6 26 96.2
Nitab4.5_0001450g0070 Nicotiana tabacum HOM05D003598 ORTHO05D004198 3.4e-08 61.2 31 80.6
A10p21130 Brassica napus HOM05D003598 ORTHO05D004198 5.8e-08 60.5 27 88.9
C03p10310 Brassica napus HOM05D003598 ORTHO05D004198 5.8e-08 60.5 27 88.9
Hund19509 Selenicereus undatus HOM05D003598 ORTHO05D004198 5.8e-08 60.5 28 85.7
EL10Ac9g22923 Beta vulgaris HOM05D003598 ORTHO05D004198 7.5e-08 60.1 25 96.0
AUR62005202 Chenopodium quinoa HOM05D003598 ORTHO05D004198 7.5e-08 60.1 25 96.0
Medtr2g009110 Medicago truncatula HOM05D003084 ORTHO05D003580 7.5e-08 60.1 38 81.6
CBR_g263 Chara braunii HOM05D003598 ORTHO05D004198 9.8e-08 59.7 33 72.7
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 9.8e-08 59.7 29 86.2
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 1.7e-07 58.9 24 100.0
Oeu045722.3 Olea europaea HOM05D003598 ORTHO05D004198 2.2e-07 58.5 25 92.0
BcaC04g18694 Brassica carinata HOM05D003598 ORTHO05D004198 2.9e-07 58.2 31 80.6
A03p08820 Brassica napus HOM05D003598 ORTHO05D004198 2.9e-07 58.2 26 88.5
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 2.9e-07 58.2 25 92.0
Hund19575 Selenicereus undatus HOM05D003598 ORTHO05D004198 2.9e-07 58.2 29 75.9
CsaV3_3G032510 Cucumis sativus L. HOM05D003598 ORTHO05D004198 3.7e-07 57.8 25 92.0
Ah.07g198410 Amaranthus hybridus HOM05D003598 ORTHO05D004198 4.9e-07 57.4 28 85.7
SGA_v2.0_scaffold277G46719 Striga asiatica HOM05D003598 ORTHO05D004198 4.9e-07 57.4 28 78.6
MBI06_g34034_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 6.4e-07 57.0 26 88.5
Hund31482 Selenicereus undatus HOM05D003598 ORTHO05D004198 8.3e-07 56.6 25 88.0
SGA_v2.0_scaffold144G35883 Striga asiatica HOM05D003598 ORTHO05D004198 8.3e-07 56.6 25 88.0
CSS0011637 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D000909 1.9e-06 55.5 27 74.1
CSS0032311 Camellia sinensis var. sinensis HOM05D003598 ORTHO05D004198 1.9e-06 55.5 27 74.1
MBI06_g36503_MAGBIO Magnolia biondii HOM05D003598 ORTHO05D004198 1.9e-06 55.5 25 88.0
PRCOL_00002502 Prasinoderma coloniale HOM05D003598 ORTHO05D004198 5.4e-06 53.9 38 68.4
Hund19574 Selenicereus undatus HOM05D003598 ORTHO05D004198 5.4e-06 53.9 25 88.0
Sc20g0002190 Simmondsia chinensis HOM05D003598 ORTHO05D004198 5.4e-06 53.9 24 87.5


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