Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 0.0e+00 1548.9 810 100.0
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 0.0e+00 1130.9 844 76.7
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 0.0e+00 1094.3 849 74.8
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 0.0e+00 1087.4 839 73.1
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 1.1e-291 1006.5 830 69.3
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 3.6e-253 878.6 897 58.8
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 8.9e-252 874.0 888 58.3
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 7.0e-249 864.4 818 60.6
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 7.8e-248 860.9 818 60.4
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 1.7e-247 859.8 737 64.9
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 9.5e-246 854.0 817 61.2
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 2.7e-240 835.9 919 55.8
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 1.7e-223 780.0 724 60.1
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 3.6e-221 772.3 725 59.2
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 2.6e-219 766.1 732 57.9
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 7.6e-219 764.6 678 59.7
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 1.3e-218 763.8 710 58.2
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.7e-218 763.5 703 60.9
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 4.2e-217 758.8 762 55.9
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 1.6e-216 756.9 918 52.1
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 2.1e-216 756.5 932 49.6
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.0e-215 754.2 683 59.7
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 8.7e-215 751.1 685 59.0
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.5e-214 750.4 719 57.0
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.5e-214 749.6 702 58.7
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 3.3e-214 749.2 715 57.8
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 3.3e-214 749.2 755 55.5
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 7.4e-214 748.0 718 57.4
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 1.3e-213 747.3 702 57.7
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 8.1e-213 744.6 716 56.8
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.8e-212 743.4 703 58.2
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 3.1e-212 742.7 720 57.2
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 6.9e-212 741.5 701 58.3
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 1.5e-211 740.3 689 58.1
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 2.0e-211 740.0 919 49.5
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 2.6e-211 739.6 721 57.0
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 4.5e-211 738.8 691 57.2
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 4.5e-211 738.8 722 55.5
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 7.6e-211 738.0 709 56.4
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 7.6e-211 738.0 716 57.3
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 9.9e-211 737.6 673 59.3
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 1.7e-210 736.9 721 57.7
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 2.9e-210 736.1 802 52.0
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 2.9e-210 736.1 708 57.9
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 6.4e-210 734.9 719 55.8
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 6.4e-210 734.9 714 55.7
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 9.3e-209 731.1 753 55.1
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 1.2e-208 730.7 730 55.2
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 1.2e-208 730.7 724 56.8
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 6.0e-208 728.4 722 55.7
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 7.9e-208 728.0 677 58.8
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.0e-207 726.1 727 56.4
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 8.7e-207 724.5 709 56.3
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 8.7e-207 724.5 706 56.5
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 1.9e-206 723.4 738 54.3
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 2.1e-205 719.9 732 55.7
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.1e-205 719.9 711 56.7
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 2.8e-205 719.5 712 56.2
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 1.8e-204 716.8 711 55.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 2.4e-204 716.5 908 49.0
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 6.9e-204 714.9 718 56.0
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 1.2e-203 714.1 729 56.1
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 1.2e-203 714.1 939 47.3
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 2.6e-203 713.0 721 55.5
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.3e-202 710.7 936 46.9
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.3e-202 710.7 938 46.9
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.8e-202 709.1 763 52.7
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 8.4e-202 708.0 689 57.5
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.4e-201 707.2 722 54.0
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.4e-201 707.2 720 55.3
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 3.2e-201 706.1 713 56.9
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 9.3e-201 704.5 733 53.6
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.2e-200 704.1 723 53.9
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.6e-200 703.7 726 54.5
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.7e-200 703.0 723 54.2
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.0e-199 701.0 704 55.1
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 1.3e-199 700.7 720 54.9
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 3.9e-199 699.1 741 52.8
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 8.7e-199 698.0 679 56.3
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.9e-198 696.8 706 55.8
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 4.3e-198 695.7 704 54.8
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.3e-197 694.1 783 50.2
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 3.7e-197 692.6 689 54.3
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 3.7e-197 692.6 710 53.5
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 4.8e-197 692.2 836 50.5
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 6.3e-197 691.8 743 52.0
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 8.2e-197 691.4 749 52.6
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.1e-196 691.0 723 55.0
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 4.1e-196 689.1 704 54.5
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 6.9e-196 688.3 698 55.2
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 1.2e-195 687.6 688 54.1
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 2.0e-195 686.8 741 51.8
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 4.5e-195 685.6 713 54.0
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 2.9e-194 682.9 751 53.3
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 2.5e-193 679.9 740 52.4
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 1.2e-192 677.6 699 53.5
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 1.3e-191 674.1 728 53.7
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 1.9e-190 670.2 826 49.6
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 7.4e-190 668.3 683 55.2
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 1.4e-188 664.1 860 47.0
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.4e-188 664.1 714 54.1
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.8e-188 663.7 843 47.1
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 5.3e-188 662.1 859 46.6
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 6.9e-188 661.8 664 55.4
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 4.2e-185 652.5 861 48.1
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 4.6e-184 649.0 879 45.7
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 3.0e-183 646.4 710 52.4
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 8.8e-183 644.8 789 48.9
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 3.3e-182 642.9 870 46.1
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 5.0e-178 629.0 747 48.5
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 1.4e-175 620.9 741 48.2
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 3.3e-174 616.3 741 48.2
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 4.4e-166 589.3 741 47.4
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 3.6e-160 569.7 727 45.9
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 1.2e-158 564.7 735 49.1
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 2.2e-154 550.4 728 45.1
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 8.0e-144 515.4 626 48.7
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 3.0e-143 513.5 676 46.3
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 1.5e-142 511.1 739 42.9
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 6.9e-111 406.0 462 53.0
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 2.5e-105 387.5 534 40.1
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.9e-97 361.3 485 39.8
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.7e-93 348.2 305 55.1
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.8e-90 338.2 917 30.8
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 2.7e-83 314.3 455 39.1
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.8e-35 154.8 116 67.2
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 5.7e-33 147.1 116 65.5
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 1.2e-27 129.4 383 28.7
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.3e-21 109.4 146 45.2
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 2.5e-20 105.1 175 37.7
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 1.9e-15 89.0 122 47.5
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 2.4e-15 88.6 122 47.5
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.1e-10 73.2 40 92.5
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.0e-10 71.2 78 48.7
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 1.5e-09 69.3 78 48.7
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 7.5e-09 67.0 80 51.2
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 2.4e-07 62.0 71 52.1


User provided reference genes

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