Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03001_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.5e-129 465.7 246 100.0
Ca_18931_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 7.8e-67 258.1 269 56.5
Ca_07364_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 3.7e-53 212.6 172 66.9
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 6.6e-50 201.8 260 52.7
Ca_28313_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 3.4e-46 189.5 164 65.2
Ca_12196_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.5e-41 173.3 217 48.4
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 4.3e-33 146.0 153 49.7
TPR.G24473 Trifolium pratense HOM05D024240 ORTHO05D000385 1.6e-32 144.1 167 46.1
Lsat_1_v5_gn_7_106561 Lactuca sativa HOM05D001309 ORTHO05D000385 5.3e-23 112.5 139 39.6
Ca_08868_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 4.9e-21 105.9 102 48.0
Nn7g37795 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.2e-20 103.2 97 47.4
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.7e-18 95.1 136 41.2
Lsat_1_v5_gn_4_141161 Lactuca sativa HOM05D001309 ORTHO05D000385 2.5e-17 93.6 186 30.6
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.8e-16 90.1 170 34.1
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 2.8e-16 90.1 170 34.1
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 2.8e-16 90.1 167 32.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.7e-16 89.7 170 33.5
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.8e-16 89.4 168 28.6
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-16 89.4 154 35.7
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.2e-16 88.6 169 32.5
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-15 88.2 169 32.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-15 87.0 169 32.5
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-15 87.0 169 32.5
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-15 87.0 169 32.5
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-15 87.0 169 32.5
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.4e-15 87.0 169 32.5
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.3e-15 85.9 170 31.8
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 6.9e-15 85.5 139 34.5
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 6.9e-15 85.5 139 34.5
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.0e-15 85.1 160 28.8
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.0e-14 84.0 170 31.8
COL.COLO4_28315 Corchorus olitorius HOM05D011604 ORTHO05D012513 3.4e-14 83.2 91 39.6
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 3.4e-14 83.2 170 31.2
COL.COLO4_29995 Corchorus olitorius HOM05D011604 ORTHO05D012513 4.5e-14 82.8 89 40.4
Nn7g36108 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.9e-13 80.1 78 46.2
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-13 79.0 144 32.6
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-13 79.0 138 34.8
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.1e-12 78.2 192 27.1
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.4e-12 77.8 170 31.8
MBI17_g42351_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-12 77.8 106 40.6
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.5e-12 77.0 171 29.8
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 3.2e-12 76.6 127 34.6
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.2e-12 76.3 171 28.7
ECA238G0557 Erigeron canadensis HOM05D001309 ORTHO05D000385 4.2e-12 76.3 104 36.5
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 7.1e-12 75.5 170 31.2
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-11 74.7 172 29.7
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.2e-11 74.7 172 27.9
ECA247G2753 Erigeron canadensis HOM05D000006 ORTHO05D000062 1.6e-11 74.3 104 36.5
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.1e-11 73.9 172 31.4
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-11 73.9 171 29.2
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 2.1e-11 73.9 146 32.9
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.7e-11 73.6 159 29.6
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 4.6e-11 72.8 105 35.2
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 4.6e-11 72.8 170 30.6
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.1e-11 72.4 158 29.1
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 7.9e-11 72.0 158 30.4
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 7.9e-11 72.0 158 30.4
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-10 71.6 169 29.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 1.0e-10 71.6 170 27.1
COL.COLO4_09996 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.8e-10 70.9 116 33.6
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.8e-10 70.9 151 32.5
MBI09_g41430_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-10 70.9 105 35.2
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-10 70.9 106 36.8
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.8e-10 70.9 169 28.4
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.9e-10 69.7 103 36.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 5.1e-10 69.3 103 36.9
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 5.1e-10 69.3 243 25.5
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.7e-10 68.9 153 26.1
Dinv01725 Davidia involucrata HOM05D010146 ORTHO05D000385 6.7e-10 68.9 103 33.0
ECA236G2738 Erigeron canadensis HOM05D001309 ORTHO05D000385 6.7e-10 68.9 147 27.9
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.7e-10 68.9 97 40.2
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 8.7e-10 68.6 170 30.6
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-09 68.2 169 32.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-09 68.2 169 27.8
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-09 68.2 170 27.6
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-09 67.4 105 36.2
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.9e-09 67.4 137 30.7
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 2.5e-09 67.0 170 30.6
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 3.3e-09 66.6 175 29.7
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-09 66.6 153 32.0
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.3e-09 66.6 137 30.7
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.3e-09 66.6 137 30.7
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-09 66.2 168 28.6
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 5.7e-09 65.9 243 24.7
Ca_19974_v3 Cicer arietinum L. HOM05D004751 ORTHO05D000385 5.7e-09 65.9 54 63.0
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 5.7e-09 65.9 173 27.7
TAR629G3448 Trochodendron aralioides HOM05D001163 ORTHO05D001769 5.7e-09 65.9 102 35.3
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 5.7e-09 65.9 105 34.3
Ca_14583_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.4e-09 65.5 35 91.4
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.4e-09 65.5 147 28.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 7.4e-09 65.5 168 27.4
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 9.7e-09 65.1 218 24.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.7e-09 65.1 177 23.2
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 1.3e-08 64.7 103 36.9
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.8e-08 63.5 106 32.1
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-08 62.8 153 30.1
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 4.8e-08 62.8 176 24.4
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-08 62.8 162 29.0
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 6.3e-08 62.4 162 22.2
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 6.3e-08 62.4 135 31.9
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.3e-08 62.4 185 27.6
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.3e-08 62.4 105 35.2
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.2e-08 62.0 170 26.5
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.1e-07 61.6 168 29.8
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-07 61.2 163 27.6
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.8e-07 60.8 149 32.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.8e-07 60.8 141 27.7
MBI14_g41280_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-07 60.8 121 34.7
Rhsim11G0013700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.8e-07 60.8 105 36.2
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.8e-07 60.8 101 34.7
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-07 60.1 180 28.3
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-07 60.1 75 38.7
Nn3g21266 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.1e-07 60.1 95 37.9
Rhsim13G0228900 Rhododendron simsii HOM05D001309 ORTHO05D000385 5.3e-07 59.3 115 34.8
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 6.9e-07 58.9 170 30.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 6.9e-07 58.9 134 30.6
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 6.9e-07 58.9 168 25.6
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.9e-07 58.9 101 33.7
MBI14_g27230_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.0e-07 58.5 146 30.8
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 9.0e-07 58.5 135 30.4
COL.COLO4_07537 Corchorus olitorius HOM05D011604 ORTHO05D012513 1.2e-06 58.2 139 32.4
COL.COLO4_24303 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.2e-06 58.2 134 26.9
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 58.2 105 33.3
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 1.5e-06 57.8 109 32.1
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-06 57.8 151 29.1
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-06 57.8 168 23.2
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.6e-06 57.0 266 22.2
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 2.6e-06 57.0 181 27.6
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 3.4e-06 56.6 102 33.3
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 4.5e-06 56.2 121 28.1
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 5.9e-06 55.8 99 30.3
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.9e-06 55.8 162 27.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 5.9e-06 55.8 82 34.1
Dinv04329 Davidia involucrata HOM05D010146 ORTHO05D000385 7.7e-06 55.5 127 26.8
Dinv11732 Davidia involucrata HOM05D010146 ORTHO05D000385 7.7e-06 55.5 127 26.8
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 7.7e-06 55.5 120 27.5
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 7.7e-06 55.5 141 27.0


User provided reference genes

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