Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 8.1e-100 367.1 185 100.0
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 8.9e-91 337.0 185 90.8
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 9.2e-88 327.0 185 85.9
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 3.9e-86 321.6 185 86.5
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.1e-85 320.1 185 85.4
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 1.2e-79 300.1 188 82.4
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 1.6e-79 299.7 188 81.4
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 7.8e-79 297.4 185 77.8
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 7.8e-79 297.4 188 80.3
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 8.7e-78 293.9 187 79.1
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 3.3e-77 292.0 188 77.7
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 4.3e-77 291.6 199 74.9
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 5.6e-77 291.2 187 79.1
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 7.3e-77 290.8 199 74.9
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.8e-75 286.2 188 76.6
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 5.8e-74 281.2 188 73.9
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 5.8e-74 281.2 188 73.9
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 1.4e-72 276.6 189 74.1
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 2.4e-72 275.8 174 78.2
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 7.1e-72 274.2 189 73.5
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 9.3e-72 273.9 186 74.7
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-71 273.1 188 72.9
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-71 273.1 188 72.9
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 2.1e-71 272.7 189 73.5
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 2.1e-71 272.7 189 73.0
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 2.1e-71 272.7 189 73.0
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 2.1e-71 272.7 189 73.0
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 3.5e-71 271.9 189 71.4
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 7.9e-71 270.8 189 73.0
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 7.9e-71 270.8 189 72.5
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 1.0e-70 270.4 191 72.3
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 1.3e-70 270.0 189 73.5
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 6.7e-70 267.7 188 72.9
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 6.7e-70 267.7 189 71.4
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.1e-69 266.9 189 71.4
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 4.3e-69 265.0 186 73.1
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 7.4e-69 264.2 189 70.9
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 9.6e-69 263.8 189 70.9
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 9.6e-69 263.8 187 72.2
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 1.3e-68 263.5 174 73.6
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 1.3e-68 263.5 174 73.6
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 1.3e-68 263.5 187 70.6
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 1.6e-68 263.1 174 74.1
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 2.1e-68 262.7 179 72.1
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 3.6e-68 261.9 189 69.3
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 4.8e-68 261.5 174 74.7
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.8e-67 259.6 182 72.5
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.8e-67 259.6 182 72.5
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 2.4e-67 259.2 189 68.8
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 2.4e-67 259.2 186 69.4
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.4e-67 259.2 182 72.0
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 2.4e-67 259.2 174 74.1
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 5.3e-67 258.1 189 69.3
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 3.4e-66 255.4 174 73.0
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 9.9e-66 253.8 180 68.9
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 9.9e-66 253.8 182 70.9
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 9.9e-66 253.8 190 66.8
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 1.3e-65 253.4 197 66.5
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 2.2e-65 252.7 179 69.3
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 2.2e-65 252.7 174 71.8
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.9e-65 251.5 189 68.8
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 4.9e-65 251.5 174 71.3
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 4.9e-65 251.5 174 73.6
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 6.4e-65 251.1 204 65.2
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 8.4e-65 250.8 177 71.2
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 8.4e-65 250.8 189 66.7
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 1.9e-64 249.6 174 71.8
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 1.9e-64 249.6 174 70.1
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 3.2e-64 248.8 174 70.1
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 5.5e-64 248.1 182 68.7
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 5.5e-64 248.1 189 65.6
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 5.5e-64 248.1 174 69.5
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 9.3e-64 247.3 189 68.3
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 1.6e-63 246.5 175 71.4
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 2.1e-63 246.1 187 68.4
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 2.7e-63 245.7 177 67.8
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 3.5e-63 245.4 174 67.8
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.5e-63 245.4 179 69.3
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 7.9e-63 244.2 187 64.7
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 1.0e-62 243.8 189 65.1
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 1.0e-62 243.8 196 64.8
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 6.7e-62 241.1 189 65.1
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 8.7e-62 240.7 174 68.4
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.5e-61 240.0 174 67.8
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 1.9e-61 239.6 174 67.8
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 5.6e-61 238.0 174 67.2
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 1.3e-60 236.9 169 66.9
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 4.8e-60 235.0 189 61.4
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 6.2e-60 234.6 184 64.1
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 4.0e-59 231.9 152 76.3
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 6.9e-59 231.1 196 61.2
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 9.0e-59 230.7 184 63.6
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 2.0e-58 229.6 174 65.5
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 5.8e-58 228.0 159 71.7
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 5.8e-58 228.0 174 64.4
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 7.9e-55 217.6 271 46.5
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 5.1e-54 214.9 182 58.2
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 2.8e-52 209.1 170 60.0
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.3e-51 204.9 181 56.4
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 9.0e-51 204.1 157 66.2
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 2.6e-50 202.6 174 58.0
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 3.8e-49 198.7 163 63.2
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 1.4e-48 196.8 177 55.9
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 1.6e-47 193.4 174 56.3
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 2.1e-47 193.0 174 56.9
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 4.6e-47 191.8 177 55.9
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 3.9e-46 188.7 174 56.9
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 1.1e-45 187.2 174 56.3
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 1.6e-44 183.3 170 61.8
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 6.3e-44 181.4 174 55.2
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 1.1e-43 180.6 174 58.0
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 2.4e-43 179.5 174 55.2
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 3.1e-43 179.1 207 50.2
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 7.7e-42 174.5 174 53.4
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 2.2e-41 172.9 174 52.9
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 2.2e-41 172.9 174 52.9
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 2.2e-41 172.9 174 52.9
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.2e-40 169.1 177 50.3
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 3.2e-40 169.1 177 50.8
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.2e-40 169.1 177 50.3
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 5.7e-37 158.3 141 57.4
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 5.9e-34 148.3 106 71.7
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 5.0e-33 145.2 155 54.8
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 1.1e-32 144.1 177 46.9
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 8.2e-28 127.9 74 83.8
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 5.3e-27 125.2 101 64.4
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 3.3e-21 105.9 82 61.0
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.3e-21 105.9 79 64.6
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 1.3e-20 104.0 155 40.0
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 3.7e-20 102.4 82 65.9
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 8.2e-20 101.3 159 35.8
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 8.2e-20 101.3 82 65.9
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 4.1e-19 99.0 85 62.4
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 5.9e-18 95.1 71 64.8
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.7e-17 93.6 67 67.2
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.7e-17 93.6 71 63.4
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 2.2e-17 93.2 61 75.4
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 1.9e-16 90.1 119 39.5
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 3.2e-16 89.4 137 38.0
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 8.0e-15 84.7 94 53.2
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 8.3e-12 74.7 91 52.7
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 9.1e-11 71.2 66 60.6
Zm00001eb076020 Zea mays HOM05D005262 ORTHO05D444176 3.6e-07 59.3 45 57.8


User provided reference genes

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