Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 5.3e-195 684.1 331 100.0
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-163 580.1 328 85.1
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 6.8e-158 560.8 325 83.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.6e-154 548.1 329 81.2
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 4.6e-154 548.1 323 83.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 4.3e-152 541.6 326 80.4
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.4e-147 525.8 325 76.6
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 5.6e-144 514.6 324 76.9
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.4e-141 505.4 322 75.8
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.2e-130 470.3 327 68.5
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.7e-129 466.5 323 67.8
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.7e-129 466.5 342 66.4
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 8.1e-127 457.6 324 67.0
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 4.0e-126 455.3 328 65.9
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 5.3e-126 454.9 341 64.5
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-125 453.8 324 67.3
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 3.4e-125 452.2 327 66.4
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 4.4e-125 451.8 324 67.6
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 5.4e-123 444.9 328 65.5
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-122 443.4 331 65.0
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 2.1e-122 443.0 331 65.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 2.1e-122 443.0 331 65.0
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 3.5e-122 442.2 325 65.2
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 7.9e-122 441.0 323 65.3
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 2.3e-121 439.5 326 65.0
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 6.6e-121 438.0 324 64.5
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 8.1e-119 431.0 327 63.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.4e-118 429.5 324 64.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 7.6e-117 424.5 323 62.8
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 9.9e-117 424.1 323 63.5
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.9e-116 422.5 341 61.6
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.9e-116 422.5 321 65.4
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 3.2e-115 419.1 328 63.4
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 9.3e-115 417.5 327 59.9
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.2e-114 417.2 326 62.6
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.6e-114 416.8 335 60.9
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.7e-114 416.0 325 63.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 6.0e-114 414.8 321 62.0
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.3e-113 413.7 326 62.0
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 3.9e-113 412.1 326 62.0
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 5.1e-113 411.8 335 59.1
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 3.3e-112 409.1 327 60.6
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.3e-111 407.1 275 69.1
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.1e-111 406.4 327 59.9
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 2.8e-111 406.0 325 60.3
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.8e-111 405.2 325 60.3
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 8.1e-111 404.4 327 59.9
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.4e-110 403.7 327 59.6
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 4.0e-110 402.1 327 58.7
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 4.0e-110 402.1 323 58.5
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 9.0e-110 401.0 327 60.6
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 1.2e-109 400.6 327 59.6
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.6e-109 399.4 330 58.2
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.6e-109 399.4 325 59.7
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.0e-108 397.5 327 59.0
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 2.2e-108 396.4 328 58.2
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 3.8e-108 395.6 325 59.1
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 5.5e-107 391.7 328 57.9
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 4.6e-106 388.7 324 55.2
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 7.9e-106 387.9 325 59.7
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.8e-105 386.7 288 68.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.3e-105 386.3 326 59.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 5.1e-105 385.2 328 58.2
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.5e-104 382.9 329 57.8
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.3e-104 382.5 325 54.5
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 4.3e-104 382.1 324 56.2
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 3.7e-103 379.0 327 58.1
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 8.2e-103 377.9 327 56.6
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 3.1e-102 375.9 327 53.2
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.2e-101 374.0 324 57.1
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 4.5e-101 372.1 326 54.9
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.7e-100 370.2 327 52.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.4e-99 367.1 318 58.2
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.4e-99 367.1 327 56.0
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 3.2e-99 365.9 322 53.1
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 3.2e-99 365.9 322 53.1
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.2e-99 365.5 320 58.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 7.2e-99 364.8 324 53.7
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.1e-98 363.2 324 54.0
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.3e-97 359.8 358 49.4
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.4e-96 354.8 320 57.2
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 2.8e-95 352.8 346 49.4
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 2.8e-95 352.8 323 55.1
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 4.8e-95 352.1 305 58.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.9e-94 348.2 250 67.2
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 1.2e-93 347.4 326 55.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.7e-92 343.6 330 53.3
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 4.3e-88 328.9 251 64.1
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 7.4e-88 328.2 257 63.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.8e-86 323.6 252 63.9
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 9.1e-86 321.2 289 58.5
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 5.9e-85 318.5 327 49.2
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.2e-82 310.8 322 50.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 4.4e-80 302.4 211 66.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 5.7e-80 302.0 327 50.5
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.8e-79 299.7 326 48.2
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.6e-77 293.9 194 75.3
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.0e-77 293.5 326 50.9
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 5.5e-75 285.4 284 52.1
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.8e-73 280.4 263 53.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 7.5e-72 275.0 242 54.1
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 9.7e-72 274.6 222 64.9
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 4.1e-70 269.2 264 53.0
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.3e-68 264.2 190 65.8
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.3e-60 237.7 184 57.6
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.9e-60 236.5 332 40.4
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.4e-54 216.9 291 44.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.8e-42 176.8 131 58.0
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.1e-35 154.8 126 57.1
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 4.0e-33 146.4 305 33.8
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-32 143.3 103 67.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.5e-27 127.9 196 38.3
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.7e-23 114.4 140 44.3
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 7.1e-22 109.0 69 79.7
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.4e-17 94.0 73 57.5
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 2.4e-14 84.0 106 36.8


User provided reference genes

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