Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.8e-61 239.2 131 100.0
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 5.4e-58 227.6 131 94.7
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.2e-57 226.5 132 95.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.5e-57 224.9 131 93.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 9.9e-52 206.8 131 87.0
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.9e-51 205.3 131 86.3
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 7.1e-50 200.7 131 82.4
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.2e-49 199.9 131 82.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 6.0e-49 197.6 131 80.9
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.0e-48 196.8 132 84.1
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.3e-48 195.7 132 83.3
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 8.6e-48 193.7 127 81.1
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.5e-47 192.2 123 83.7
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 3.6e-46 188.3 129 82.2
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.7e-46 188.0 129 79.1
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 8.1e-46 187.2 129 79.1
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.4e-45 186.4 131 77.1
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.2e-44 183.3 130 76.9
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.5e-44 183.0 131 75.6
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.0e-44 182.6 128 75.8
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 2.6e-44 182.2 120 82.5
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 3.4e-44 181.8 131 76.3
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 3.4e-44 181.8 116 84.5
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 5.8e-44 181.0 131 74.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 5.8e-44 181.0 129 76.7
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.3e-43 179.9 129 77.5
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.7e-43 179.5 131 75.6
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 1.7e-43 179.5 123 78.9
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.2e-43 179.1 123 78.0
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 3.8e-43 178.3 121 77.7
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 4.9e-43 177.9 129 75.2
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.4e-43 177.6 136 77.2
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 8.4e-43 177.2 116 81.9
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.9e-42 176.0 136 73.5
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.4e-42 175.6 122 77.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 7.1e-42 174.1 109 86.2
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.2e-41 173.3 109 85.3
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.6e-41 172.9 118 81.4
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 2.7e-41 172.2 117 79.5
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 2.7e-41 172.2 116 83.6
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 3.5e-41 171.8 117 78.6
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.0e-40 170.2 124 76.6
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 5.1e-40 167.9 126 73.0
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 5.1e-40 167.9 131 73.3
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 5.1e-40 167.9 131 73.3
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 5.1e-40 167.9 131 73.3
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 5.1e-40 167.9 131 73.3
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 5.1e-40 167.9 131 73.3
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 6.6e-40 167.5 113 78.8
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 6.6e-40 167.5 121 73.6
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 8.7e-40 167.2 129 71.3
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.1e-39 166.8 124 75.8
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.5e-39 166.4 127 72.4
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.5e-39 166.4 131 74.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.5e-39 166.4 131 74.0
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.5e-39 166.4 129 71.3
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.9e-39 166.0 131 74.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 3.3e-39 165.2 124 72.6
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 3.3e-39 165.2 130 71.5
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 4.3e-39 164.9 116 77.6
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 4.3e-39 164.9 128 69.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 4.3e-39 164.9 128 69.5
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 4.3e-39 164.9 116 80.2
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 4.3e-39 164.9 120 73.3
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 5.6e-39 164.5 153 63.4
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 7.3e-39 164.1 117 76.9
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.3e-38 163.3 117 75.2
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.6e-38 162.9 158 62.0
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.8e-38 162.2 137 66.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 2.8e-38 162.2 137 66.4
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-37 160.2 110 78.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.4e-37 159.8 95 90.5
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.8e-37 159.5 121 71.9
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.4e-37 159.1 108 81.5
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 4.0e-37 158.3 118 74.6
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.3e-37 157.9 102 82.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 5.3e-37 157.9 110 77.3
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.3e-37 157.9 110 77.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 9.0e-37 157.1 124 72.6
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 5.8e-36 154.5 124 71.0
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 9.9e-36 153.7 167 56.3
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 9.9e-36 153.7 118 73.7
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.3e-35 153.3 129 65.9
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 4.9e-35 151.4 124 63.7
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 4.9e-35 151.4 125 67.2
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 8.4e-35 150.6 113 73.5
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.1e-33 146.0 109 71.6
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.7e-33 145.6 116 69.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.5e-31 139.8 132 65.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 4.3e-31 138.3 127 62.2
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.1e-30 136.0 104 70.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 5.3e-29 131.3 136 57.4
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.0e-28 129.4 115 65.2
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.3e-27 126.7 122 62.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.2e-27 125.9 110 66.4
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.8e-27 125.2 115 67.8
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.9e-27 124.8 88 76.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.7e-25 119.0 114 61.4
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.0e-24 117.1 110 63.6
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.1e-22 109.4 112 58.0
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 2.9e-19 99.0 74 70.3
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 4.2e-18 95.1 95 63.2
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.5e-17 92.0 118 45.8
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 6.7e-16 87.8 73 63.0
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-14 83.2 100 44.0
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 3.7e-14 82.0 114 45.6
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 2.0e-12 76.3 51 80.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 1.9e-07 59.7 52 63.5
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 1.9e-07 59.7 55 56.4


User provided reference genes

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