Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 4.9e-94 347.8 178 100.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 1.2e-76 290.0 177 83.1
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 5.1e-75 284.6 177 83.1
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 6.6e-75 284.3 178 80.3
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.3e-67 260.0 153 86.3
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 1.1e-66 256.9 160 80.6
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.1e-64 248.8 178 71.3
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 4.2e-61 238.4 178 70.8
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 4.0e-56 221.9 177 68.4
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.5e-55 219.9 177 63.3
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 3.2e-53 212.2 176 62.5
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 9.3e-53 210.7 178 61.8
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 2.1e-52 209.5 174 61.5
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 2.1e-52 209.5 167 61.1
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 2.7e-52 209.1 168 61.9
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 3.5e-52 208.8 177 62.1
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 1.3e-51 206.8 177 60.5
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 2.3e-51 206.1 177 65.0
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 3.0e-51 205.7 172 64.0
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 5.1e-51 204.9 167 59.3
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 6.7e-51 204.5 176 59.1
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.1e-50 203.8 168 61.9
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.5e-50 203.4 168 60.7
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.9e-50 203.0 168 61.3
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 2.5e-50 202.6 181 58.6
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 2.5e-50 202.6 181 58.6
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 4.3e-50 201.8 176 59.7
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 7.4e-50 201.1 169 60.4
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.8e-49 199.1 168 60.1
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 3.7e-49 198.7 179 57.0
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.7e-49 198.7 169 58.0
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 6.2e-49 198.0 167 61.1
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 8.1e-49 197.6 176 59.1
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.1e-48 197.2 178 56.7
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-48 196.8 168 59.5
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 9.0e-48 194.1 169 58.6
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.5e-47 193.4 166 59.6
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 2.6e-47 192.6 167 58.1
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 3.4e-47 192.2 176 57.4
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 3.4e-47 192.2 172 58.7
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 3.4e-47 192.2 172 58.7
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 3.4e-47 192.2 168 56.5
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 5.8e-47 191.4 174 58.0
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 7.6e-47 191.0 172 58.1
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.7e-46 189.9 172 58.1
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.2e-46 189.5 168 59.5
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 2.9e-46 189.1 172 57.6
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 2.9e-46 189.1 168 60.7
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 4.9e-46 188.3 176 56.8
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 1.1e-45 187.2 168 54.8
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 1.4e-45 186.8 153 62.7
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 5.5e-45 184.9 171 55.6
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 7.1e-45 184.5 166 54.8
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 7.1e-45 184.5 167 54.5
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 7.1e-45 184.5 172 54.7
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.6e-44 183.3 163 56.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 4.6e-44 181.8 176 55.1
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 4.6e-44 181.8 169 55.6
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 7.9e-44 181.0 171 55.6
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 7.9e-44 181.0 171 55.6
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 7.9e-44 181.0 167 53.9
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 1.0e-43 180.6 172 55.2
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 1.3e-43 180.3 167 54.5
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.3e-43 180.3 169 55.0
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 1.8e-43 179.9 158 60.8
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 1.8e-43 179.9 158 60.8
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 3.0e-43 179.1 167 53.3
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 3.0e-43 179.1 160 55.6
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.9e-43 178.7 197 50.8
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 8.7e-43 177.6 170 55.3
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 8.7e-43 177.6 148 62.8
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.5e-42 176.8 166 57.2
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 1.5e-42 176.8 177 55.4
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 2.5e-42 176.0 162 54.9
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 2.5e-42 176.0 162 54.9
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 4.3e-42 175.3 167 53.3
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 4.3e-42 175.3 169 53.3
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 6.2e-41 171.4 167 56.3
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 8.2e-41 171.0 172 51.7
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 1.1e-40 170.6 158 58.2
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 5.3e-40 168.3 163 54.6
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.0e-39 166.4 163 52.8
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 2.0e-39 166.4 163 52.8
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 2.0e-39 166.4 156 57.7
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 5.8e-39 164.9 163 52.8
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 5.8e-39 164.9 168 53.0
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 3.8e-38 162.2 187 47.6
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.8e-38 162.2 132 61.4
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 4.9e-38 161.8 163 52.1
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 8.4e-38 161.0 171 49.1
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.9e-37 159.8 172 49.4
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 2.5e-37 159.5 170 52.9
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 3.2e-37 159.1 166 51.8
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 4.2e-37 158.7 155 54.2
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 5.5e-37 158.3 151 55.6
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 7.1e-37 157.9 149 53.0
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.7e-36 156.0 166 51.2
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 3.5e-36 155.6 142 61.3
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.0e-35 154.1 210 44.3
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 3.0e-35 152.5 166 49.4
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 1.1e-34 150.6 163 49.7
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.5e-34 150.2 156 52.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.5e-34 150.2 218 42.7
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.3e-34 149.1 215 43.3
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 3.3e-34 149.1 138 56.5
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 5.7e-34 148.3 169 49.7
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 5.7e-34 148.3 132 60.6
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 7.4e-34 147.9 163 47.9
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 1.3e-33 147.1 149 53.0
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 2.8e-33 146.0 130 56.9
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 3.1e-32 142.5 140 55.7
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 4.1e-32 142.1 174 44.3
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 5.3e-32 141.7 162 50.0
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 5.3e-32 141.7 142 57.7
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 1.5e-31 140.2 161 46.0
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 2.0e-31 139.8 158 50.6
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 4.5e-31 138.7 138 53.6
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 5.9e-31 138.3 144 50.7
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.9e-30 136.0 140 53.6
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.4e-29 133.7 146 51.4
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.4e-29 133.7 154 50.6
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.2e-28 130.6 129 53.5
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 1.0e-27 127.5 134 53.7
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 2.3e-27 126.3 268 33.2
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.5e-26 123.6 168 44.0
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 9.7e-26 120.9 173 43.9
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.8e-25 119.4 148 48.6
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 2.8e-25 119.4 94 70.2
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 2.4e-24 116.3 165 42.4
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 3.1e-24 115.9 87 60.9
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 4.1e-24 115.5 164 45.1
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 1.0e-22 110.9 173 38.7
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.2e-22 109.8 114 50.9
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 6.5e-22 108.2 81 70.4
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 8.5e-22 107.8 89 60.7
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 7.2e-21 104.8 111 54.1
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 1.2e-20 104.0 112 55.4
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.6e-20 103.6 81 66.7
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 7.9e-20 101.3 70 60.0
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.4e-19 100.5 81 64.2
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.8e-19 100.1 91 59.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.3e-18 95.9 90 61.1
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 1.7e-17 93.6 162 35.8
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.0e-15 86.7 110 49.1
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.3e-14 84.0 80 57.5
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 5.5e-13 78.6 58 72.4
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 7.2e-13 78.2 135 38.5
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 1.6e-12 77.0 55 74.5
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 8.8e-11 71.2 58 63.8
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 8.8e-11 71.2 166 30.7
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.6e-07 60.5 49 69.4


User provided reference genes

Program Settings