Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02745_v3 Cicer arietinum L. HOM05D002368 ORTHO05D002425 2.0e-41 172.2 96 100.0
TPR.G38536 Trifolium pratense HOM05D002368 ORTHO05D002425 9.8e-33 143.3 98 84.7
Lalb_Chr10g0099181 Lupinus albus HOM05D002368 ORTHO05D002425 8.6e-29 130.2 96 77.1
Psat2g088280 Pisum sativum HOM05D002368 ORTHO05D002425 8.6e-29 130.2 98 78.6
Glyma.02G122900 Glycine max HOM05D002368 ORTHO05D002425 1.5e-28 129.4 93 78.5
VMungo1215G0611 Vigna mungo HOM05D002368 ORTHO05D002425 9.5e-28 126.7 93 76.3
Glyma.01G065100 Glycine max HOM05D002368 ORTHO05D002425 1.6e-27 125.9 93 78.5
Lj2g0028243 Lotus japonicus HOM05D002368 ORTHO05D002425 2.8e-27 125.2 96 77.1
Phvul.003G038100 Phaseolus vulgaris HOM05D002368 ORTHO05D002425 1.2e-25 119.8 94 75.5
Haze_11857 Corylus avellana HOM05D002368 ORTHO05D002425 1.6e-22 109.4 95 66.3
Medtr5g048180 Medicago truncatula HOM05D002368 ORTHO05D002425 6.0e-22 107.5 81 80.2
Lalb_Chr17g0341481 Lupinus albus HOM05D002368 ORTHO05D002425 2.3e-21 105.5 99 65.7
Cfa008849 Carpinus fangiana HOM05D002368 ORTHO05D002425 5.1e-21 104.4 95 66.3
Manes.06G079300 Manihot esculenta HOM05D002368 ORTHO05D002425 4.7e-19 97.8 97 62.9
Manes.14G090500 Manihot esculenta HOM05D002368 ORTHO05D002425 1.4e-18 96.3 99 59.6
Atru.chr11.1556 Acer truncatum HOM05D002368 ORTHO05D002425 3.4e-17 91.7 96 59.4
Potri.008G111900 Populus trichocarpa HOM05D002368 ORTHO05D002425 3.4e-17 91.7 93 54.8
Ciclev10032260m.g Citrus clementina HOM05D002368 ORTHO05D002425 7.6e-17 90.5 99 56.6
THA.LOC104821990 Tarenaya hassleriana HOM05D002368 ORTHO05D002425 9.9e-17 90.1 94 63.8
Sabra10G0106200 Salix brachista HOM05D001549 ORTHO05D003098 1.3e-16 89.7 95 60.0
Potri.010G137900 Populus trichocarpa HOM05D002368 ORTHO05D002425 1.7e-16 89.4 97 59.8
AT1G26300 Arabidopsis thaliana HOM05D002368 ORTHO05D002425 3.7e-16 88.2 91 57.1
QL03p073315 Quercus lobata HOM05D002368 ORTHO05D002425 1.1e-15 86.7 93 62.4
Prupe.1G293800 Prunus persica HOM05D002368 ORTHO05D002425 1.4e-15 86.3 92 59.8
MD16G1055200 Malus domestica HOM05D002368 ORTHO05D002425 2.4e-15 85.5 95 60.0
CiPaw.05G121400 Carya illinoinensis HOM05D002368 ORTHO05D002425 4.1e-15 84.7 91 61.5
arahy.Tifrunner.gnm1.ann1.KKI3E8 Arachis hypogaea HOM05D002368 ORTHO05D002425 5.4e-15 84.3 102 59.8
CARHR025620 Cardamine hirsuta HOM05D002368 ORTHO05D002425 1.6e-14 82.8 91 57.1
CiPaw.06G095200 Carya illinoinensis HOM05D002368 ORTHO05D002425 3.5e-14 81.6 90 55.6
CANSAT64G1161 Cannabis sativa HOM05D002368 ORTHO05D002425 4.6e-14 81.3 92 55.4
AL1G39450 Arabidopsis lyrata HOM05D002368 ORTHO05D002425 6.0e-14 80.9 91 54.9
AL2G28080 Arabidopsis lyrata HOM05D002368 ORTHO05D002425 7.8e-14 80.5 95 56.8
Rhsim09G0121900 Rhododendron simsii HOM05D002368 ORTHO05D002425 1.0e-13 80.1 86 59.3
arahy.Tifrunner.gnm1.ann1.LH3A9J Arachis hypogaea HOM05D002368 ORTHO05D002425 1.7e-13 79.3 102 57.8
Carub.0002s1564 Capsella rubella HOM05D002368 ORTHO05D002425 3.9e-13 78.2 93 55.9
MD13G1056300 Malus domestica HOM05D002368 ORTHO05D002425 3.9e-13 78.2 95 56.8
Actinidia13407 Actinidia chinensis HOM05D002368 ORTHO05D002425 8.6e-13 77.0 86 59.3
Cpa.g.sc289.4 Carica papaya HOM05D002368 ORTHO05D002425 1.5e-12 76.3 89 58.4
CsaV3_5G033490 Cucumis sativus L. HOM05D002368 ORTHO05D002425 1.5e-12 76.3 94 54.3
AT1G69030 Arabidopsis thaliana HOM05D002368 ORTHO05D002425 1.9e-12 75.9 95 57.9
Actinidia07766 Actinidia chinensis HOM05D002368 ORTHO05D002425 4.3e-12 74.7 78 60.3
TWI31G1386 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 5.6e-12 74.3 92 59.8
Hma1.2p1_0428F.1_g150810 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 9.6e-12 73.6 91 58.2
RcHm_v2.0_Chr4g0437321 Rosa chinensis HOM05D002368 ORTHO05D002425 1.2e-11 73.2 92 56.5
Sed0005180 Sechium edule HOM05D002368 ORTHO05D002425 1.6e-11 72.8 98 49.0
BraA02t06618Z Brassica rapa HOM05D002368 ORTHO05D002425 2.1e-11 72.4 98 53.1
CARHR061900 Cardamine hirsuta HOM05D002368 ORTHO05D002425 3.6e-11 71.6 95 52.6
Dinv34019 Davidia involucrata HOM05D002368 ORTHO05D002425 4.7e-11 71.2 88 54.5
BcaC03g15026 Brassica carinata HOM05D002368 ORTHO05D002425 6.2e-11 70.9 98 52.0
BolC2t08640H Brassica oleracea HOM05D002368 ORTHO05D002425 6.2e-11 70.9 98 52.0
Dinv38638 Davidia involucrata HOM05D002368 ORTHO05D002425 1.1e-10 70.1 74 59.5
Thecc.02G322500 Theobroma cacao HOM05D002368 ORTHO05D002425 1.1e-10 70.1 100 56.0
TWI75G0640 Tripterygium wilfordii HOM05D002368 ORTHO05D002425 1.8e-10 69.3 94 57.4
MELO3C012169.2 Cucumis melo HOM05D002368 ORTHO05D002425 3.1e-10 68.6 84 56.0
C02p25710 Brassica napus HOM05D002368 ORTHO05D002425 5.2e-10 67.8 98 51.0
Sabra08G0084600 Salix brachista HOM05D002368 ORTHO05D002425 6.8e-10 67.4 83 55.4
Aqoxy3G03754 Aquilegia oxysepala HOM05D002368 ORTHO05D002425 1.5e-09 66.2 87 51.7
FAN22G0623 Fragaria x ananassa HOM05D002368 ORTHO05D002425 5.8e-09 64.3 92 51.1
A02p15570 Brassica napus HOM05D002368 ORTHO05D002425 7.6e-09 63.9 99 49.5
FAN07G0142 Fragaria x ananassa HOM05D002368 ORTHO05D002425 7.6e-09 63.9 92 51.1
vmacro17661 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 9.9e-09 63.5 77 51.9
Lj6A773T132 Lonicera japonica HOM05D002368 ORTHO05D002425 2.9e-08 62.0 75 57.3
Sp5g24140 Schrenkiella parvula HOM05D002368 ORTHO05D002425 2.9e-08 62.0 95 49.5
vmacro10472 Vaccinium macrocarpon HOM05D002368 ORTHO05D002425 3.8e-08 61.6 116 41.4
CSS0029037 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 4.9e-08 61.2 71 57.7
GSVIVG01008159001 Vitis vinifera HOM05D002368 ORTHO05D002425 4.9e-08 61.2 87 54.0
CSS0027328 Camellia sinensis var. sinensis HOM05D002368 ORTHO05D002425 6.4e-08 60.8 80 57.5
Actinidia10440 Actinidia chinensis HOM05D002368 ORTHO05D002425 1.9e-07 59.3 77 50.6
Hma1.2p1_0060F.1_g032700 Hydrangea macrophylla HOM05D002368 ORTHO05D002425 2.4e-07 58.9 78 53.8
PGR119G2372 Punica granatum HOM05D002368 ORTHO05D002425 2.4e-07 58.9 70 52.9
Nn4g23546 Nelumbo nucifera HOM05D002368 ORTHO05D002425 5.4e-07 57.8 89 51.7
QL10p020809 Quercus lobata HOM05D002368 ORTHO05D002425 5.4e-07 57.8 83 49.4
Oeu010197.3 Olea europaea HOM05D002368 ORTHO05D002425 9.3e-07 57.0 79 49.4
Lj9A437G48 Lonicera japonica HOM05D002368 ORTHO05D002425 2.7e-06 55.5 78 51.3
ClCG05G023530 Citrullus lanatus HOM05D002368 ORTHO05D002425 3.5e-06 55.1 97 43.3
MBI14_g34640_MAGBIO Magnolia biondii HOM05D002368 ORTHO05D002425 3.5e-06 55.1 59 55.9
Eucgr.B00640 Eucalyptus grandis HOM05D002368 ORTHO05D002425 4.6e-06 54.7 71 53.5
HPP92_017966 Vanilla planifolia HOM05D002368 ORTHO05D002425 4.6e-06 54.7 56 64.3
Aa31sc63G70 Aethionema arabicum HOM05D002368 ORTHO05D002425 6.0e-06 54.3 97 45.4
Thhalv10018843m.g Eutrema salsugineum HOM05D002368 ORTHO05D002425 7.8e-06 53.9 66 51.5


User provided reference genes

Program Settings