Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02713_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 5.6e-175 617.5 302 100.0
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 2.4e-125 452.6 301 77.1
Ca_10473_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 2.9e-83 312.8 182 85.2
TPR.G36892 Trifolium pratense HOM05D003212 ORTHO05D003959 1.7e-78 297.0 163 89.6
Psat0s1718g0040 Pisum sativum HOM05D003212 ORTHO05D003959 1.8e-77 293.5 163 87.1
Medtr8g038390 Medicago truncatula HOM05D003212 ORTHO05D003959 1.3e-75 287.3 163 85.9
Lj3g0024329 Lotus japonicus HOM05D003212 ORTHO05D003959 3.9e-75 285.8 182 78.6
CiPaw.14G006800 Carya illinoinensis HOM05D003212 ORTHO05D003959 6.6e-75 285.0 163 85.3
Lj3g0002083 Lotus japonicus HOM05D003212 ORTHO05D003959 2.5e-74 283.1 163 84.7
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 3.3e-74 282.7 163 85.9
Psat5g219440 Pisum sativum HOM05D003212 ORTHO05D003959 4.3e-74 282.3 182 77.5
Lalb_Chr04g0264051 Lupinus albus HOM05D003212 ORTHO05D003959 5.6e-74 282.0 163 85.3
Sabra01G0019400 Salix brachista HOM05D003212 ORTHO05D003959 5.6e-74 282.0 163 84.0
Cpa.g.sc223.10 Carica papaya HOM05D003212 ORTHO05D003959 7.3e-74 281.6 163 84.7
Potri.001G026300 Populus trichocarpa HOM05D003212 ORTHO05D003959 7.3e-74 281.6 163 84.7
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 7.3e-74 281.6 163 84.7
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 7.3e-74 281.6 163 84.7
Lalb_Chr14g0366121 Lupinus albus HOM05D003212 ORTHO05D003959 9.5e-74 281.2 163 85.3
FAN01G2682 Fragaria x ananassa HOM05D003212 ORTHO05D003959 1.6e-73 280.4 183 77.0
VMungo1080G0024 Vigna mungo HOM05D003212 ORTHO05D003959 1.6e-73 280.4 163 84.7
Medtr1g025060 Medicago truncatula HOM05D003212 ORTHO05D003959 2.8e-73 279.6 163 83.4
Medtr3g017580 Medicago truncatula HOM05D003212 ORTHO05D003959 2.8e-73 279.6 182 76.4
RcHm_v2.0_Chr1g0323241 Rosa chinensis HOM05D003212 ORTHO05D003959 2.8e-73 279.6 163 84.0
Lalb_Chr03g0032831 Lupinus albus HOM05D003212 ORTHO05D003959 3.6e-73 279.3 163 83.4
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 4.7e-73 278.9 163 84.7
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 4.7e-73 278.9 163 84.7
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 4.7e-73 278.9 163 84.0
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 6.2e-73 278.5 163 83.4
FvH4_7g02810 Fragaria vesca HOM05D003212 ORTHO05D003959 6.2e-73 278.5 163 84.0
Phvul.005G029300 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 6.2e-73 278.5 182 76.4
FAN10G3499 Fragaria x ananassa HOM05D003212 ORTHO05D003959 8.0e-73 278.1 163 83.4
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea HOM05D003212 ORTHO05D003959 1.0e-72 277.7 182 75.8
CANSAT80G2392 Cannabis sativa HOM05D003212 ORTHO05D003959 1.0e-72 277.7 163 84.7
AUR62003806 Chenopodium quinoa HOM05D003212 ORTHO05D003959 1.0e-72 277.7 163 82.8
CsaV3_5G024820 Cucumis sativus L. HOM05D003212 ORTHO05D003959 1.0e-72 277.7 163 83.4
Glyma.11G154200 Glycine max HOM05D003212 ORTHO05D003959 1.0e-72 277.7 182 76.4
TAR369G1042 Trochodendron aralioides HOM05D003212 ORTHO05D003959 1.0e-72 277.7 163 82.8
VMungo1127G0513 Vigna mungo HOM05D003212 ORTHO05D003959 1.0e-72 277.7 163 82.8
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea HOM05D003212 ORTHO05D003959 1.4e-72 277.3 182 75.8
ClCG01G007740 Citrullus lanatus HOM05D003212 ORTHO05D003959 1.4e-72 277.3 163 83.4
Manes.11G004200 Manihot esculenta HOM05D003212 ORTHO05D003959 1.4e-72 277.3 167 81.4
FAN06G3951 Fragaria x ananassa HOM05D003212 ORTHO05D003959 1.8e-72 276.9 163 83.4
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 1.8e-72 276.9 163 84.7
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea HOM05D003212 ORTHO05D003959 2.3e-72 276.6 163 82.8
Glyma.13G198700 Glycine max HOM05D003212 ORTHO05D003959 2.3e-72 276.6 163 82.2
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 2.3e-72 276.6 163 84.0
Gohir.D13G149300 Gossypium hirsutum HOM05D003212 ORTHO05D003959 3.1e-72 276.2 163 84.0
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 3.1e-72 276.2 163 83.4
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea HOM05D003212 ORTHO05D003959 4.0e-72 275.8 163 82.8
Ca_18881_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 4.0e-72 275.8 182 75.8
Prupe.2G032600 Prunus persica HOM05D003212 ORTHO05D003959 4.0e-72 275.8 163 82.8
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 5.2e-72 275.4 163 82.8
Ciclev10001014m.g Citrus clementina HOM05D003212 ORTHO05D003959 5.2e-72 275.4 163 83.4
Ciclev10004916m.g Citrus clementina HOM05D003212 ORTHO05D003959 5.2e-72 275.4 163 83.4
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 8.9e-72 274.6 163 81.0
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 1.2e-71 274.2 163 83.4
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 1.2e-71 274.2 163 81.6
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 1.5e-71 273.9 163 82.2
Sed0011268 Sechium edule HOM05D003212 ORTHO05D003959 1.5e-71 273.9 163 82.2
Sed0013182 Sechium edule HOM05D003212 ORTHO05D003959 1.5e-71 273.9 163 82.2
GSVIVG01000650001 Vitis vinifera HOM05D003212 ORTHO05D003959 2.0e-71 273.5 163 82.8
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 2.6e-71 273.1 163 83.4
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 2.6e-71 273.1 163 83.4
ECA248G3712 Erigeron canadensis HOM05D003212 ORTHO05D003959 3.4e-71 272.7 163 82.8
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 4.4e-71 272.3 163 82.2
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 4.4e-71 272.3 182 75.8
Phvul.011G207800 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 4.4e-71 272.3 163 81.0
Hund15723 Selenicereus undatus HOM05D003212 ORTHO05D003959 4.4e-71 272.3 163 81.6
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 5.8e-71 271.9 163 83.4
Ca_23514_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 5.8e-71 271.9 182 73.6
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 7.5e-71 271.6 163 82.2
Cc02_g26670 Coffea canephora HOM05D003212 ORTHO05D003959 1.3e-70 270.8 163 81.0
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 1.3e-70 270.8 163 81.6
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.7e-70 270.4 163 82.8
Rhsim01G0123800 Rhododendron simsii HOM05D003212 ORTHO05D003959 1.7e-70 270.4 163 82.2
PGR031G0586 Punica granatum HOM05D003212 ORTHO05D003959 3.7e-70 269.2 163 81.0
Nn7g36634 Nelumbo nucifera HOM05D003212 ORTHO05D003959 4.9e-70 268.9 163 80.4
AUR62001997 Chenopodium quinoa HOM05D003212 ORTHO05D003959 6.4e-70 268.5 163 80.4
Migut.O00503 Erythranthe guttata HOM05D003212 ORTHO05D003959 6.4e-70 268.5 163 81.0
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 8.3e-70 268.1 163 82.8
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla HOM05D003212 ORTHO05D003959 8.3e-70 268.1 163 81.6
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 8.3e-70 268.1 163 81.6
HPP92_003235 Vanilla planifolia HOM05D003212 ORTHO05D003959 8.3e-70 268.1 163 79.8
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 1.1e-69 267.7 163 78.5
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 1.1e-69 267.7 163 79.1
MD09G1262400 Malus domestica HOM05D003212 ORTHO05D003959 1.1e-69 267.7 163 80.4
Oeu002655.1 Olea europaea HOM05D003212 ORTHO05D003959 1.1e-69 267.7 163 80.4
Solyc11g068830.2 Solanum lycopersicum HOM05D003212 ORTHO05D003959 1.1e-69 267.7 163 81.6
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 1.9e-69 266.9 163 78.5
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 1.9e-69 266.9 163 78.5
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 2.4e-69 266.5 163 80.4
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 4.1e-69 265.8 163 81.0
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 4.1e-69 265.8 163 80.4
Sopen11g027550 Solanum pennellii HOM05D003212 ORTHO05D003959 4.1e-69 265.8 163 81.6
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 4.1e-69 265.8 163 81.6
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 5.4e-69 265.4 163 79.8
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 7.0e-69 265.0 163 80.4
MELO3C005122.2 Cucumis melo HOM05D003212 ORTHO05D003959 7.0e-69 265.0 163 81.6
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 7.0e-69 265.0 193 71.5
Migut.N01834 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.0e-68 263.5 163 80.4
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 2.0e-68 263.5 163 80.4
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 3.5e-68 262.7 163 81.0
DCAR_006596 Daucus carota HOM05D003212 ORTHO05D003959 3.5e-68 262.7 163 80.4
Os01g0951400 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 7.8e-68 261.5 163 77.3
MSTRG.20521 Avicennia marina HOM05D003212 ORTHO05D003959 1.3e-67 260.8 163 77.9
ATR0789G118 Amborella trichopoda HOM05D003212 ORTHO05D003959 3.0e-67 259.6 162 78.4
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 3.9e-67 259.2 163 79.1
PSO384G1532 Papaver somniferum HOM05D003212 ORTHO05D003959 5.0e-67 258.8 163 76.7
SGA_v2.0_scaffold232G43508 Striga asiatica HOM05D003212 ORTHO05D003959 8.6e-67 258.1 163 77.9
vmacro12692 Vaccinium macrocarpon HOM05D003212 ORTHO05D003959 8.6e-67 258.1 171 77.8
Migut.B01220 Erythranthe guttata HOM05D003212 ORTHO05D003959 1.1e-66 257.7 167 76.6
Nitab4.5_0001135g0170 Nicotiana tabacum HOM05D003212 ORTHO05D003959 1.1e-66 257.7 163 79.1
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 2.5e-66 256.5 163 77.3
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 2.5e-66 256.5 163 77.3
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 2.5e-66 256.5 165 77.0
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 3.3e-66 256.1 161 77.6
Nitab4.5_0000893g0050 Nicotiana tabacum HOM05D003212 ORTHO05D003959 3.3e-66 256.1 163 79.1
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 4.3e-66 255.8 163 76.7
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 4.3e-66 255.8 163 76.7
PSO339G4798 Papaver somniferum HOM05D003212 ORTHO05D003959 4.3e-66 255.8 163 75.5
Lj7A581T52 Lonicera japonica HOM05D003212 ORTHO05D003959 5.6e-66 255.4 163 78.5
QL04p014894 Quercus lobata HOM05D003212 ORTHO05D003959 5.6e-66 255.4 151 82.8
Zm00001eb140930 Zea mays HOM05D003212 ORTHO05D003959 5.6e-66 255.4 163 75.5
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 7.3e-66 255.0 182 69.2
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 1.6e-65 253.8 163 76.7
unitig_26.g9606 Utricularia gibba HOM05D003212 ORTHO05D003959 1.6e-65 253.8 163 77.9
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 2.1e-65 253.4 163 76.1
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 2.1e-65 253.4 163 76.1
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 2.1e-65 253.4 163 76.1
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 2.8e-65 253.1 163 76.7
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 2.8e-65 253.1 163 76.7
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 2.8e-65 253.1 161 77.0
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 2.8e-65 253.1 161 77.0
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 4.7e-65 252.3 163 75.5
MD17G1257300 Malus domestica HOM05D003212 ORTHO05D003959 8.1e-65 251.5 163 75.5
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 1.4e-64 250.8 163 76.1
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 2.3e-64 250.0 163 74.8
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 4.0e-64 249.2 163 75.5
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 4.0e-64 249.2 163 75.5
Mapoly0052s0107 Marchantia polymorpha HOM05D003212 ORTHO05D003959 4.0e-64 249.2 162 74.7
Zm00001eb140940 Zea mays HOM05D003212 ORTHO05D003959 6.8e-64 248.4 163 74.8
Eucgr.G03242 Eucalyptus grandis HOM05D003212 ORTHO05D003959 2.6e-63 246.5 151 79.5
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis HOM05D003212 ORTHO05D003959 2.9e-62 243.0 163 71.8
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 9.2e-61 238.0 163 75.5
ECA232G0145 Erigeron canadensis HOM05D003212 ORTHO05D003959 1.6e-60 237.3 163 74.2
Pp3c3_16990 Physcomitrium patens HOM05D003212 ORTHO05D003959 1.5e-58 230.7 161 69.6
CDE09G0923 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 1.6e-57 227.3 163 69.9
GSVIVG01000654001 Vitis vinifera HOM05D003212 ORTHO05D003959 2.3e-56 223.4 134 80.6
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 8.9e-56 221.5 161 67.7
FAN03G0414 Fragaria x ananassa HOM05D003212 ORTHO05D003959 1.7e-54 217.2 124 85.5
Pp3c13_16830 Physcomitrium patens HOM05D003212 ORTHO05D003959 4.9e-54 215.7 159 66.0
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 1.3e-51 207.6 161 61.5
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 1.7e-51 207.2 164 62.8
Hund13345 Selenicereus undatus HOM05D003212 ORTHO05D003959 2.8e-49 199.9 151 65.6
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 1.1e-48 198.0 161 60.2
SEGI_29745 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 3.4e-47 193.0 132 72.7
MCO07G762 Micromonas commoda HOM05D003212 ORTHO05D003959 8.7e-43 178.3 161 56.5
VMungo1215G0810 Vigna mungo HOM05D003212 ORTHO05D003959 1.4e-40 171.0 102 81.4
SalBow5G3827 Salvia bowleyana HOM05D003212 ORTHO05D003959 6.4e-38 162.2 133 64.7
Atru.chr12.1029 Acer truncatum HOM05D003212 ORTHO05D003959 5.4e-37 159.1 100 77.0
TPR.G17794 Trifolium pratense HOM05D003212 ORTHO05D003959 5.6e-34 149.1 104 72.1
HPP92_003231 Vanilla planifolia HOM05D003212 ORTHO05D003959 4.5e-31 139.4 88 79.5
SalBow5G1921 Salvia bowleyana HOM05D003212 ORTHO05D003959 1.9e-26 124.0 77 77.9
SMO181G0021 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 1.9e-26 124.0 150 48.7
VMungo1309G2010 Vigna mungo HOM05D003212 ORTHO05D003959 2.8e-25 120.2 81 75.3
BcaC03g15881 Brassica carinata HOM05D003212 ORTHO05D017586 2.8e-17 93.6 71 67.6
Aqoxy5G02061 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 2.9e-14 83.6 96 50.0
BolC2t09647H Brassica oleracea HOM05D003212 ORTHO05D017586 7.2e-13 79.0 64 65.6
HPP92_003227 Vanilla planifolia HOM05D003212 ORTHO05D003959 7.2e-13 79.0 46 82.6
Glyma.17G012702 Glycine max HOM05D003212 ORTHO05D003959 7.9e-12 75.5 41 87.8
Aqoxy4G01641 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 3.3e-10 70.1 52 71.2
Glyma.20G015500 Glycine max HOM05D003212 ORTHO05D003959 4.3e-10 69.7 62 56.5
BolC6t37247H Brassica oleracea HOM05D003212 ORTHO05D017586 1.8e-08 64.3 73 47.9
BolC8t48010H Brassica oleracea HOM05D003212 ORTHO05D039289 5.3e-08 62.8 44 68.2
BcaB05g24115 Brassica carinata HOM05D003212 ORTHO05D017537 7.7e-07 58.9 55 52.7
BcaC03g17911 Brassica carinata HOM05D003212 ORTHO05D017537 2.2e-06 57.4 34 82.4
BcaB01g04040 Brassica carinata HOM05D003212 ORTHO05D017537 6.5e-06 55.8 55 50.9


User provided reference genes

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