Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02660_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 2.0e-66 255.8 138 100.0
Lj1g0022824 Lotus japonicus HOM05D000805 ORTHO05D000624 3.6e-28 128.6 107 68.2
Glyma.06G209900 Glycine max HOM05D000805 ORTHO05D000624 4.9e-25 118.2 96 64.6
Glyma.05G013800 Glycine max HOM05D000805 ORTHO05D000624 8.3e-25 117.5 142 50.0
TPR.G10792 Trifolium pratense HOM05D000805 ORTHO05D000624 2.4e-24 115.9 133 61.7
RcHm_v2.0_Chr7g0184461 Rosa chinensis HOM05D000805 ORTHO05D000624 3.2e-24 115.5 146 47.3
Sc04g0003940 Simmondsia chinensis HOM05D000805 ORTHO05D000624 7.0e-24 114.4 136 50.0
COL.COLO4_22703 Corchorus olitorius HOM05D000805 ORTHO05D000624 9.2e-24 114.0 137 50.4
Lj4g0019200 Lotus japonicus HOM05D000805 ORTHO05D000624 9.2e-24 114.0 121 55.4
Sc04g0003780 Simmondsia chinensis HOM05D000805 ORTHO05D000624 9.2e-24 114.0 136 50.0
Dinv38593 Davidia involucrata HOM05D000805 ORTHO05D000624 1.2e-23 113.6 141 48.2
FvH4_5g12770 Fragaria vesca HOM05D000805 ORTHO05D000624 1.2e-23 113.6 115 52.2
FAN08G0915 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.2e-23 113.6 115 52.2
FAN18G2577 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.2e-23 113.6 115 52.2
Ciclev10022589m.g Citrus clementina HOM05D000805 ORTHO05D000624 2.0e-23 112.8 144 49.3
FAN18G2287 Fragaria x ananassa HOM05D000805 ORTHO05D000624 2.7e-23 112.5 115 51.3
MD14G1221100 Malus domestica HOM05D000805 ORTHO05D000624 4.6e-23 111.7 135 51.1
CAN.G438.110 Capsicum annuum HOM05D000805 ORTHO05D000624 5.9e-23 111.3 147 46.3
Ca_02532_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 5.9e-23 111.3 144 47.2
FAN13G0318 Fragaria x ananassa HOM05D000805 ORTHO05D000624 7.8e-23 110.9 132 47.0
Medtr4g111770 Medicago truncatula HOM05D000805 ORTHO05D000624 1.3e-22 110.2 110 56.4
Thecc.03G027500 Theobroma cacao HOM05D000805 ORTHO05D000624 1.3e-22 110.2 134 47.8
CSS0016408 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 1.7e-22 109.8 135 48.1
TAR371G0521 Trochodendron aralioides HOM05D000805 ORTHO05D000624 1.7e-22 109.8 113 54.9
Phvul.003G177800 Phaseolus vulgaris HOM05D000805 ORTHO05D000624 5.0e-22 108.2 141 46.1
PGSC0003DMG400005620 Solanum tuberosum HOM05D000805 ORTHO05D000624 5.0e-22 108.2 113 51.3
TWI15G0225 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 5.0e-22 108.2 130 48.5
Nitab4.5_0003716g0070 Nicotiana tabacum HOM05D000805 ORTHO05D000624 8.6e-22 107.5 113 51.3
Peaxi162Scf00015g00065 Petunia axillaris HOM05D000805 ORTHO05D000624 8.6e-22 107.5 113 51.3
Prupe.5G216500 Prunus persica HOM05D000805 ORTHO05D000624 8.6e-22 107.5 123 51.2
VMungo1215G1355 Vigna mungo HOM05D000805 ORTHO05D000624 8.6e-22 107.5 141 46.8
HanXRQChr05g0153271 Helianthus annuus HOM05D000805 ORTHO05D000624 1.1e-21 107.1 111 52.3
CiPaw.15G125600 Carya illinoinensis HOM05D000805 ORTHO05D000624 1.5e-21 106.7 133 47.4
Haze_18596 Corylus avellana HOM05D000805 ORTHO05D000624 1.5e-21 106.7 140 45.7
Psat4g044680 Pisum sativum HOM05D000805 ORTHO05D000624 1.5e-21 106.7 137 48.2
QL10p023095 Quercus lobata HOM05D000805 ORTHO05D000624 1.5e-21 106.7 136 46.3
Psat1g210440 Pisum sativum HOM05D000805 ORTHO05D000624 1.9e-21 106.3 136 49.3
Atru.chr9.743 Acer truncatum HOM05D000805 ORTHO05D000624 2.5e-21 105.9 140 45.7
Duzib068G0145 Durio zibethinus HOM05D000805 ORTHO05D000624 2.5e-21 105.9 134 44.8
Sopen03g038680 Solanum pennellii HOM05D000805 ORTHO05D000624 2.5e-21 105.9 143 44.8
Glyma.17G122000 Glycine max HOM05D000805 ORTHO05D000624 3.3e-21 105.5 113 51.3
Lsat_1_v5_gn_5_24340 Lactuca sativa HOM05D000805 ORTHO05D000624 3.3e-21 105.5 136 44.9
Lalb_Chr13g0302381 Lupinus albus HOM05D000805 ORTHO05D000624 3.3e-21 105.5 137 47.4
Solyc03g119820.1 Solanum lycopersicum HOM05D000805 ORTHO05D000624 3.3e-21 105.5 143 44.8
Actinidia35074 Actinidia chinensis HOM05D000805 ORTHO05D000624 4.3e-21 105.1 111 50.5
RhsimUnG0106300 Rhododendron simsii HOM05D000805 ORTHO05D000624 4.3e-21 105.1 129 44.2
Lj9P432T54 Lonicera japonica HOM05D000805 ORTHO05D000624 5.6e-21 104.8 113 51.3
PSO384G3992 Papaver somniferum HOM05D000805 ORTHO05D000624 5.6e-21 104.8 111 51.4
Cpa.g.sc13.63 Carica papaya HOM05D000805 ORTHO05D000624 7.3e-21 104.4 134 47.0
Manes.05G118400 Manihot esculenta HOM05D000805 ORTHO05D000624 7.3e-21 104.4 138 47.1
CANSAT56G2119 Cannabis sativa HOM05D000805 ORTHO05D000624 9.5e-21 104.0 122 50.0
Nn3g17697 Nelumbo nucifera HOM05D000805 ORTHO05D000624 9.5e-21 104.0 110 51.8
Oeu027135.1 Olea europaea HOM05D000805 ORTHO05D000624 9.5e-21 104.0 130 46.2
TAR629G2157 Trochodendron aralioides HOM05D000805 ORTHO05D000624 1.6e-20 103.2 144 46.5
Dinv36897 Davidia involucrata HOM05D000805 ORTHO05D000624 2.1e-20 102.8 136 47.8
Eucgr.K02651 Eucalyptus grandis HOM05D000805 ORTHO05D000624 3.6e-20 102.1 146 45.2
MD06G1210400 Malus domestica HOM05D000805 ORTHO05D000624 3.6e-20 102.1 149 47.0
TAR622G1246 Trochodendron aralioides HOM05D000805 ORTHO05D000624 3.6e-20 102.1 113 48.7
Aqoxy3G00383 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 4.7e-20 101.7 145 41.4
Gohir.A11G007500 Gossypium hirsutum HOM05D000805 ORTHO05D000624 6.1e-20 101.3 146 42.5
PSO339G2444 Papaver somniferum HOM05D000805 ORTHO05D000624 6.1e-20 101.3 111 49.5
GSVIVG01008228001 Vitis vinifera HOM05D000805 ORTHO05D000624 6.1e-20 101.3 141 44.7
Lj9P215T11 Lonicera japonica HOM05D000805 ORTHO05D000624 1.8e-19 99.8 113 49.6
Oeu016163.1 Olea europaea HOM05D000805 ORTHO05D000624 2.3e-19 99.4 93 53.8
Gohir.D11G006600 Gossypium hirsutum HOM05D000805 ORTHO05D000624 4.0e-19 98.6 146 42.5
DCAR_023179 Daucus carota HOM05D000805 ORTHO05D000624 5.2e-19 98.2 131 45.0
Sabra15G0076100 Salix brachista HOM05D000805 ORTHO05D000624 5.2e-19 98.2 143 45.5
Gorai.007G007900 Gossypium raimondii HOM05D000805 ORTHO05D000624 6.8e-19 97.8 147 42.2
PGR044G2217 Punica granatum HOM05D000805 ORTHO05D000624 8.9e-19 97.4 120 50.8
Migut.L01615 Erythranthe guttata HOM05D000805 ORTHO05D000624 2.0e-18 96.3 140 41.4
Lalb_Chr23g0274941 Lupinus albus HOM05D000805 ORTHO05D000624 2.0e-18 96.3 125 54.4
Potri.012G059400 Populus trichocarpa HOM05D000805 ORTHO05D000624 2.6e-18 95.9 144 45.1
SGA_v2.0_scaffold94G28615 Striga asiatica HOM05D000805 ORTHO05D000624 9.8e-18 94.0 140 40.7
ATR0053G013 Amborella trichopoda HOM05D000805 ORTHO05D000624 3.7e-17 92.0 146 41.1
TWI81G1081 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 4.9e-17 91.7 112 49.1
Nitab4.5_0007105g0030 Nicotiana tabacum HOM05D000805 ORTHO05D000624 1.1e-16 90.5 114 48.2
Duzib205G0938 Durio zibethinus HOM05D000805 ORTHO05D000624 1.9e-16 89.7 134 41.0
Gohir.D01G141400 Gossypium hirsutum HOM05D004417 ORTHO05D000624 1.9e-16 89.7 135 39.3
Lalb_Chr07g0178551 Lupinus albus HOM05D000805 ORTHO05D000624 1.9e-16 89.7 133 45.1
Peaxi162Scf00013g00094 Petunia axillaris HOM05D000805 ORTHO05D000624 1.9e-16 89.7 105 52.4
Psat5g107320 Pisum sativum HOM05D000805 ORTHO05D000624 1.9e-16 89.7 160 41.2
ECA246G0147 Erigeron canadensis HOM05D000805 ORTHO05D000624 2.4e-16 89.4 113 45.1
Gohir.A09G045000 Gossypium hirsutum HOM05D000805 ORTHO05D000624 3.2e-16 89.0 100 51.0
EL10Ac5g11243 Beta vulgaris HOM05D000805 ORTHO05D000624 4.1e-16 88.6 113 47.8
Gorai.002G174000 Gossypium raimondii HOM05D004417 ORTHO05D000624 4.1e-16 88.6 135 39.3
Sabra12G0042600 Salix brachista HOM05D000805 ORTHO05D000624 4.1e-16 88.6 140 45.0
Gohir.A01G148918 Gossypium hirsutum HOM05D000805 ORTHO05D000624 5.4e-16 88.2 135 39.3
Nitab4.5_0001432g0070 Nicotiana tabacum HOM05D000805 ORTHO05D000624 5.4e-16 88.2 117 47.9
MBI10_g08548_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 9.2e-16 87.4 119 45.4
Gohir.D09G046500 Gossypium hirsutum HOM05D000805 ORTHO05D000624 1.2e-15 87.0 103 50.5
Gorai.006G063600 Gossypium raimondii HOM05D000805 ORTHO05D000624 1.2e-15 87.0 103 50.5
Carub.0001s3816 Capsella rubella HOM05D000805 ORTHO05D000624 1.6e-15 86.7 140 42.1
Lj5P141T66 Lonicera japonica HOM05D000805 ORTHO05D000624 1.6e-15 86.7 106 49.1
Sopen06g026520 Solanum pennellii HOM05D000805 ORTHO05D000624 2.0e-15 86.3 117 47.9
CDE07G0568 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 2.7e-15 85.9 115 44.3
Os05g0576700 Oryza sativa ssp. japonica HOM05D000805 ORTHO05D000624 2.7e-15 85.9 128 41.4
CARHR093950 Cardamine hirsuta HOM05D000805 ORTHO05D000624 4.6e-15 85.1 138 39.9
CDE06G1043 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 6.0e-15 84.7 107 45.8
Thhalv10021947m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 7.8e-15 84.3 136 40.4
Solyc06g069260.1 Solanum lycopersicum HOM05D000805 ORTHO05D000624 7.8e-15 84.3 112 45.5
Aa31LG8G5430 Aethionema arabicum HOM05D000805 ORTHO05D000624 1.0e-14 84.0 119 44.5
ClCG06G015070 Citrullus lanatus HOM05D000805 ORTHO05D000624 1.0e-14 84.0 121 43.8
BcaC07g37088 Brassica carinata HOM05D000805 ORTHO05D000624 1.3e-14 83.6 151 39.1
Carub.0003s1835 Capsella rubella HOM05D000805 ORTHO05D000624 1.3e-14 83.6 113 44.2
AL3G31880 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 2.3e-14 82.8 138 39.1
AL451U10010 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 2.3e-14 82.8 138 39.1
PGSC0003DMG400004072 Solanum tuberosum HOM05D000805 ORTHO05D000624 2.3e-14 82.8 114 47.4
PGR083G2122 Punica granatum HOM05D000805 ORTHO05D000624 3.9e-14 82.0 108 41.7
Gohir.D12G265400 Gossypium hirsutum HOM05D000805 ORTHO05D000624 5.0e-14 81.6 138 39.1
Gorai.008G285100 Gossypium raimondii HOM05D000805 ORTHO05D000624 5.0e-14 81.6 143 39.2
AT3G18570 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 6.6e-14 81.3 128 41.4
Thhalv10011990m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 6.6e-14 81.3 151 38.4
MELO3C017282.2 Cucumis melo HOM05D000805 ORTHO05D000624 1.1e-13 80.5 121 41.3
QL05p063059 Quercus lobata HOM05D000805 ORTHO05D000624 1.1e-13 80.5 77 55.8
THA.LOC104821850 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 1.1e-13 80.5 115 47.8
AUR62036943 Chenopodium quinoa HOM05D000805 ORTHO05D000624 1.9e-13 79.7 67 55.2
Gohir.A12G265200 Gossypium hirsutum HOM05D000805 ORTHO05D000624 1.9e-13 79.7 138 39.1
Sp3g16650 Schrenkiella parvula HOM05D000805 ORTHO05D000624 3.3e-13 79.0 136 39.7
BcaB06g25905 Brassica carinata HOM05D000805 ORTHO05D000624 4.3e-13 78.6 136 38.2
BcaC08g43105 Brassica carinata HOM05D000805 ORTHO05D000624 5.6e-13 78.2 138 39.1
A05p31050 Brassica napus HOM05D000805 ORTHO05D000624 5.6e-13 78.2 136 38.2
C06p03750 Brassica napus HOM05D002822 ORTHO05D003179 5.6e-13 78.2 138 39.1
BraA05t21947Z Brassica rapa HOM05D000805 ORTHO05D000624 5.6e-13 78.2 136 38.2
BraA08t32453Z Brassica rapa HOM05D000805 ORTHO05D000624 5.6e-13 78.2 151 37.7
CsaV3_1G003570 Cucumis sativus L. HOM05D000805 ORTHO05D000624 5.6e-13 78.2 119 41.2
AT1G48990 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 9.5e-13 77.4 154 38.3
A06p04050 Brassica napus HOM05D002822 ORTHO05D003179 9.5e-13 77.4 138 39.1
AL1G55860 Arabidopsis lyrata HOM05D001087 ORTHO05D000624 1.2e-12 77.0 133 39.8
BcaC05g28600 Brassica carinata HOM05D000805 ORTHO05D000624 1.2e-12 77.0 136 36.8
C05p47030 Brassica napus HOM05D000805 ORTHO05D000624 1.2e-12 77.0 136 36.8
BolC5t33433H Brassica oleracea HOM05D000805 ORTHO05D000624 1.2e-12 77.0 136 36.8
Sp1g35900 Schrenkiella parvula HOM05D000805 ORTHO05D000624 1.2e-12 77.0 152 38.2
PSO017G6101 Papaver somniferum HOM05D000805 ORTHO05D000624 1.6e-12 76.6 114 45.6
CARHR039000 Cardamine hirsuta HOM05D000805 ORTHO05D000624 2.1e-12 76.3 146 38.4
BcaB04g17374 Brassica carinata HOM05D000805 ORTHO05D000624 2.8e-12 75.9 151 39.1
C08p04520 Brassica napus HOM05D000805 ORTHO05D000624 8.1e-12 74.3 101 43.6
BolC8t47257H Brassica oleracea HOM05D000805 ORTHO05D000624 8.1e-12 74.3 101 43.6
Eucgr.B00692 Eucalyptus grandis HOM05D000805 ORTHO05D000624 8.1e-12 74.3 113 39.8
THA.LOC104819676 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 1.1e-11 73.9 113 40.7
BcaC01g03690 Brassica carinata HOM05D000805 ORTHO05D000624 1.8e-11 73.2 115 40.0
C03p49560 Brassica napus HOM05D000805 ORTHO05D000624 1.8e-11 73.2 115 40.0
BolC3t17254H Brassica oleracea HOM05D000805 ORTHO05D000624 1.8e-11 73.2 115 40.0
BolC1t04527H Brassica oleracea HOM05D000805 ORTHO05D000624 2.3e-11 72.8 136 38.2
Manes.01G021400 Manihot esculenta HOM05D000805 ORTHO05D000624 2.3e-11 72.8 84 44.0
unitig_60.g25806 Utricularia gibba HOM05D000805 ORTHO05D000624 2.3e-11 72.8 106 39.6
Aa31LG10G4940 Aethionema arabicum HOM05D000805 ORTHO05D000624 3.1e-11 72.4 100 47.0
Ah.11g047180 Amaranthus hybridus HOM05D000805 ORTHO05D000624 3.1e-11 72.4 110 44.5
HPP92_008054 Vanilla planifolia HOM05D000805 ORTHO05D000624 3.1e-11 72.4 113 38.1
BcaB04g18991 Brassica carinata HOM05D000805 ORTHO05D000624 2.0e-10 69.7 114 39.5
Zm00001eb344420 Zea mays HOM05D000805 ORTHO05D000624 4.4e-10 68.6 113 35.4
C01p45660 Brassica napus HOM05D000805 ORTHO05D000624 7.5e-10 67.8 136 37.5
A03p40720 Brassica napus HOM05D000805 ORTHO05D000624 9.8e-10 67.4 114 37.7
BraA03t13229Z Brassica rapa HOM05D000805 ORTHO05D000624 9.8e-10 67.4 114 37.7
TPR.G32421 Trifolium pratense HOM05D067386 ORTHO05D000624 2.9e-09 65.9 67 50.7
Eucgr.C00618 Eucalyptus grandis HOM05D000805 ORTHO05D000624 3.7e-09 65.5 89 43.8
A01p35870 Brassica napus HOM05D000805 ORTHO05D000624 6.4e-09 64.7 114 37.7
BraA01t03666Z Brassica rapa HOM05D000805 ORTHO05D000624 6.4e-09 64.7 114 37.7
Lsat_1_v5_gn_4_112220 Lactuca sativa HOM05D000805 ORTHO05D000624 1.9e-08 63.2 117 41.0
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 2.4e-08 62.8 59 50.8
Sed0015398 Sechium edule HOM05D000805 ORTHO05D000624 5.4e-08 61.6 119 35.3
SGA_v2.0_scaffold44G16579 Striga asiatica HOM05D000805 ORTHO05D000624 2.1e-07 59.7 84 38.1
MBI04_g33724_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 3.5e-07 58.9 86 39.5
MBI04_g41759_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 3.5e-07 58.9 86 39.5
TAR626G0937 Trochodendron aralioides HOM05D000805 ORTHO05D000624 4.6e-07 58.5 110 36.4
TAR626G1162 Trochodendron aralioides HOM05D000805 ORTHO05D000624 4.6e-07 58.5 110 36.4
MBI04_g06987_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 6.0e-07 58.2 111 35.1
BcaC09g48815 Brassica carinata HOM05D000805 ORTHO05D000624 7.8e-07 57.8 112 40.2
Ciclev10009815m.g Citrus clementina HOM05D000805 ORTHO05D000624 1.0e-06 57.4 86 39.5
Lsat_1_v5_gn_2_127000 Lactuca sativa HOM05D000805 ORTHO05D000624 1.3e-06 57.0 75 38.7
AagrBONN_evm.TU.Sc2ySwM_228.491 Anthoceros agrestis HOM05D000805 ORTHO05D000624 2.3e-06 56.2 93 39.8
Lsat_1_v5_gn_8_9800 Lactuca sativa HOM05D000805 ORTHO05D000624 2.3e-06 56.2 75 37.3
SalBow3G3569 Salvia bowleyana HOM05D000805 ORTHO05D000624 2.3e-06 56.2 69 40.6
SalBow3G4276 Salvia bowleyana HOM05D000805 ORTHO05D000624 2.3e-06 56.2 69 40.6
SMO351G0238 Selaginella moellendorffii HOM05D000805 ORTHO05D000624 2.3e-06 56.2 107 33.6
Lalb_Chr02g0150801 Lupinus albus HOM05D000805 ORTHO05D000624 3.0e-06 55.8 106 32.1
PSO782G4143 Papaver somniferum HOM05D000805 ORTHO05D000624 3.0e-06 55.8 77 37.7
Dinv23401 Davidia involucrata HOM05D000805 ORTHO05D000624 3.9e-06 55.5 87 40.2
Oeu006088.1 Olea europaea HOM05D000805 ORTHO05D000624 3.9e-06 55.5 69 40.6
Cpa.g.sc1868.2 Carica papaya HOM05D000805 ORTHO05D000624 5.1e-06 55.1 70 44.3
Aqoxy7G01357 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 6.6e-06 54.7 110 32.7
ECA238G2834 Erigeron canadensis HOM05D000805 ORTHO05D000624 6.6e-06 54.7 75 36.0
BraA01t01594Z Brassica rapa HOM05D000805 ORTHO05D000624 8.6e-06 54.3 96 34.4
HanXRQChr05g0138621 Helianthus annuus HOM05D000805 ORTHO05D000624 8.6e-06 54.3 75 37.3
HanXRQChr08g0223251 Helianthus annuus HOM05D000805 ORTHO05D000624 8.6e-06 54.3 75 37.3
Lj2P226T37 Lonicera japonica HOM05D000805 ORTHO05D000624 8.6e-06 54.3 59 40.7
SHI18937 Sapria himalayana HOM05D000805 ORTHO05D000624 8.6e-06 54.3 93 37.6


User provided reference genes

Program Settings