Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 2.8e-235 818.1 394 100.0
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.8e-211 738.4 394 89.6
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.8e-203 711.1 394 87.6
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 7.8e-193 677.2 409 82.4
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 6.6e-192 674.1 400 82.8
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 1.2e-188 663.3 404 81.4
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 4.4e-188 661.4 404 81.4
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 1.7e-187 659.4 402 81.3
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 2.8e-174 615.5 396 74.5
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 1.0e-131 474.2 400 59.8
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 5.7e-127 458.4 400 55.5
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.6e-126 456.8 394 56.1
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 3.7e-126 455.7 404 55.7
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.7e-126 455.7 394 55.8
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 3.7e-126 455.7 401 58.1
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 4.8e-126 455.3 392 57.4
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.8e-125 453.4 396 56.3
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.9e-124 448.4 401 56.4
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 3.8e-123 445.7 398 57.8
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 5.5e-122 441.8 393 55.5
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 9.3e-122 441.0 397 55.7
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 3.6e-121 439.1 402 56.2
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 6.1e-121 438.3 393 55.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 6.1e-121 438.3 393 55.2
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 5.7e-119 431.8 401 54.1
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.7e-118 430.3 402 54.2
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 6.3e-118 428.3 410 53.9
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 1.8e-117 426.8 398 56.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 1.2e-116 424.1 404 53.7
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 3.4e-116 422.5 403 54.3
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 1.3e-115 420.6 399 53.9
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.2e-115 419.9 398 55.5
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 3.6e-113 412.5 403 52.6
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 2.3e-112 409.8 404 54.2
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 5.1e-112 408.7 405 54.8
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.3e-110 404.1 384 54.9
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 1.5e-108 397.1 397 52.9
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 3.8e-107 392.5 399 50.1
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 1.1e-106 391.0 399 49.9
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 5.5e-106 388.7 398 51.3
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.0e-104 384.4 362 54.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.9e-104 382.5 366 56.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 2.0e-103 380.2 398 50.8
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 6.3e-102 375.2 401 51.1
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 7.0e-101 371.7 398 49.2
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.3e-99 367.5 322 57.1
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 3.8e-99 365.9 395 49.9
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 6.5e-99 365.2 402 48.0
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.1e-98 364.4 322 56.5
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 1.9e-98 363.6 399 49.9
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 3.2e-98 362.8 396 48.7
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 3.2e-98 362.8 401 48.6
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 4.7e-97 359.0 399 48.9
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 6.1e-97 358.6 399 48.9
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 8.8e-96 354.8 399 48.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 8.8e-96 354.8 399 48.4
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 4.8e-94 349.0 322 55.3
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.5e-92 342.8 313 57.5
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.3e-91 340.9 324 54.3
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.5e-90 337.4 204 80.9
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.2e-89 334.3 299 54.2
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 2.1e-89 333.6 367 47.1
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 8.0e-89 331.6 366 47.3
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 8.0e-89 331.6 365 47.1
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 3.4e-87 326.2 410 45.1
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 4.8e-86 322.4 411 44.0
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 4.5e-84 315.8 353 46.7
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 4.4e-79 299.3 400 41.8
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-72 277.7 390 43.1
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 9.2e-69 265.0 383 39.7
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.8e-48 197.6 241 43.2
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.0e-27 127.1 139 41.7
SEGI_38976 Sequoiadendron giganteum HOM05D002809 ORTHO05D004939 1.7e-06 58.2 371 19.9
Pp3c8_10900 Physcomitrium patens HOM05D004302 ORTHO05D004939 6.5e-06 56.2 390 20.5


User provided reference genes

Program Settings